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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc12g010660.1.1 Tomato cytosol 26.98 47.79
PGSC0003DMT400020350 Potato cytosol, nucleus, plasma membrane 88.44 44.67
PGSC0003DMT400020353 Potato cytosol, nucleus, plastid 83.22 40.6
PGSC0003DMT400020342 Potato cytosol 81.18 39.51
PGSC0003DMT400062366 Potato cytosol 27.66 32.71
PGSC0003DMT400010966 Potato cytosol 59.86 31.92
PGSC0003DMT400047508 Potato cytosol 28.8 31.83
PGSC0003DMT400007570 Potato cytosol 59.64 28.96
PGSC0003DMT400020349 Potato cytosol 61.22 28.42
PGSC0003DMT400046497 Potato cytosol 20.86 28.22
PGSC0003DMT400020360 Potato cytosol 60.54 27.99
PGSC0003DMT400051415 Potato cytosol 29.93 27.27
PGSC0003DMT400010970 Potato plasma membrane 49.43 26.46
PGSC0003DMT400036104 Potato extracellular, plasma membrane 20.41 25.94
PGSC0003DMT400056267 Potato cytosol 26.08 25.22
PGSC0003DMT400012121 Potato extracellular, golgi 30.16 24.4
PGSC0003DMT400025440 Potato cytosol, mitochondrion 25.17 23.77
PGSC0003DMT400058642 Potato cytosol 23.81 23.08
PGSC0003DMT400030031 Potato cytosol 15.87 21.81
PGSC0003DMT400005012 Potato cytosol 17.01 21.68
PGSC0003DMT400005040 Potato cytosol, nucleus, peroxisome 27.66 21.29
PGSC0003DMT400012479 Potato cytosol 30.16 20.21
PGSC0003DMT400019683 Potato cytosol, mitochondrion 22.22 19.84
PGSC0003DMT400005041 Potato cytosol 26.53 19.31
GSMUA_AchrUn_... Banana cytosol 11.79 18.98
PGSC0003DMT400005733 Potato cytosol 22.22 18.63
PGSC0003DMT400069012 Potato cytosol 23.13 18.25
VIT_15s0045g01020.t01 Wine grape cytosol 26.53 18.2
TraesCS7B01G501200.1 Wheat cytosol 22.22 17.82
VIT_16s0022g01330.t01 Wine grape cytosol 24.94 17.38
PGSC0003DMT400056268 Potato cytosol 23.81 17.1
PGSC0003DMT400030040 Potato cytosol 23.36 16.94
PGSC0003DMT400034063 Potato cytosol 30.39 16.58
PGSC0003DMT400025439 Potato cytosol 20.63 16.55
PGSC0003DMT400036058 Potato cytosol 28.57 16.43
PGSC0003DMT400062180 Potato cytosol 31.07 16.25
PGSC0003DMT400005011 Potato cytosol, plastid 21.77 16.22
TraesCS6D01G387400.1 Wheat cytosol 20.86 16.11
PGSC0003DMT400017538 Potato nucleus 32.43 16.1
PGSC0003DMT400036070 Potato cytosol, plastid 33.56 15.98
TraesCS2D01G510300.1 Wheat cytosol 19.73 15.9
PGSC0003DMT400060798 Potato cytosol 29.25 15.87
PGSC0003DMT400078332 Potato cytosol 16.33 15.82
PGSC0003DMT400012486 Potato cytosol 31.29 15.79
PGSC0003DMT400062184 Potato cytosol 31.07 15.78
PGSC0003DMT400050509 Potato cytosol 31.29 15.75
VIT_15s0046g02800.t01 Wine grape cytosol 24.49 15.74
VIT_15s0045g00980.t01 Wine grape cytosol 21.09 15.58
PGSC0003DMT400005032 Potato cytosol 20.63 15.56
PGSC0003DMT400093366 Potato cytosol 25.4 15.47
PGSC0003DMT400082507 Potato cytosol 12.7 15.43
TraesCS6A01G404000.1 Wheat cytosol 19.05 15.36
PGSC0003DMT400047502 Potato cytosol 33.11 15.35
GSMUA_Achr7P20240_001 Banana mitochondrion 24.26 15.31
PGSC0003DMT400050821 Potato cytosol 30.39 15.16
PGSC0003DMT400059836 Potato cytosol 13.38 15.09
PGSC0003DMT400088449 Potato cytosol 31.07 15.05
PGSC0003DMT400030030 Potato nucleus 24.72 14.83
TraesCS2B01G507000.1 Wheat cytosol 24.49 14.77
PGSC0003DMT400056264 Potato endoplasmic reticulum 29.71 14.77
PGSC0003DMT400082505 Potato cytosol 14.51 14.51
PGSC0003DMT400005034 Potato plastid 13.38 14.46
PGSC0003DMT400005017 Potato cytosol, plastid 28.57 14.27
PGSC0003DMT400042194 Potato cytosol 30.39 14.24
PGSC0003DMT400066996 Potato cytosol 28.57 14.22
PGSC0003DMT400002788 Potato cytosol 27.44 14.22
PGSC0003DMT400050805 Potato cytosol 28.34 14.12
PGSC0003DMT400078333 Potato cytosol, vacuole 27.66 14.09
PGSC0003DMT400094032 Potato cytosol 12.47 14.07
PGSC0003DMT400080647 Potato cytosol 28.8 14.06
PGSC0003DMT400019329 Potato cytosol 23.36 14.03
PGSC0003DMT400031116 Potato cytosol 24.72 13.99
PGSC0003DMT400047510 Potato nucleus 32.2 13.98
PGSC0003DMT400019300 Potato cytosol, plasma membrane, plastid 21.54 13.95
VIT_15s0046g03660.t01 Wine grape cytosol 26.53 13.91
KRH01595 Soybean cytosol 28.12 13.84
PGSC0003DMT400005013 Potato plastid 27.21 13.62
PGSC0003DMT400066993 Potato cytosol, plasma membrane 28.12 13.6
KRG88520 Soybean plastid 10.66 13.54
TraesCS5D01G269100.1 Wheat cytosol 21.09 13.5
PGSC0003DMT400078334 Potato cytosol, plastid 27.89 13.37
KRH01598 Soybean cytosol 26.76 13.35
KRG88521 Soybean cytosol 26.08 13.34
KRH17117 Soybean cytosol 26.53 13.34
TraesCS7B01G500800.1 Wheat cytosol 21.77 13.31
TraesCS2A01G477200.1 Wheat cytosol 20.41 13.31
PGSC0003DMT400030019 Potato cytosol 25.4 13.27
PGSC0003DMT400030826 Potato cytosol 14.06 13.14
PGSC0003DMT400005006 Potato vacuole 26.53 13.13
GSMUA_AchrUn_... Banana cytosol 22.22 13.07
PGSC0003DMT400016707 Potato cytosol 25.17 13.06
PGSC0003DMT400030044 Potato mitochondrion 25.17 13.04
KRH45220 Soybean cytosol, extracellular, plastid 26.08 12.86
PGSC0003DMT400016712 Potato cytosol 24.49 12.86
PGSC0003DMT400030034 Potato cytosol 24.26 12.75
PGSC0003DMT400031120 Potato cytosol 8.84 12.75
PGSC0003DMT400082452 Potato cytosol 14.51 12.72
PGSC0003DMT400030011 Potato cytosol 24.26 12.71
KRH01534 Soybean cytosol 24.04 12.68
PGSC0003DMT400031132 Potato cytosol 22.9 12.62
KRH23932 Soybean cytosol 26.53 12.59
PGSC0003DMT400031142 Potato cytosol 23.81 12.59
GSMUA_Achr7P20230_001 Banana cytosol 25.17 12.5
VIT_15s0046g02810.t01 Wine grape cytosol 26.53 12.49
GSMUA_Achr7P20220_001 Banana cytosol 25.4 12.46
PGSC0003DMT400030042 Potato cytosol 24.26 12.44
VIT_15s0046g02730.t01 Wine grape cytosol 25.85 12.39
TraesCS7A01G562500.1 Wheat cytosol 15.42 12.25
VIT_15s0046g02750.t01 Wine grape cytosol 25.85 12.18
PGSC0003DMT400075885 Potato cytosol, plastid 24.49 12.18
TraesCS7B01G500700.1 Wheat cytosol 23.36 12.13
Os11t0633500-01 Rice cytosol 14.51 12.12
PGSC0003DMT400027529 Potato cytosol 24.26 12.12
PGSC0003DMT400062272 Potato cytosol 13.83 12.08
TraesCS2B01G151600.2 Wheat cytosol 23.13 12.04
PGSC0003DMT400075439 Potato cytosol 26.08 12.03
VIT_00s0448g00020.t01 Wine grape cytosol 25.62 11.98
OQU82378 Sorghum nucleus 22.68 11.93
TraesCS7A01G562000.1 Wheat cytosol 23.58 11.89
VIT_15s0046g02820.t01 Wine grape cytosol 25.4 11.86
TraesCS2B01G507100.1 Wheat cytosol 25.4 11.8
TraesCS7B01G423500.1 Wheat cytosol 23.13 11.78
TraesCS2B01G536900.1 Wheat cytosol 14.74 11.75
PGSC0003DMT400058647 Potato cytosol, nucleus 16.55 11.74
TraesCS6B01G447900.1 Wheat cytosol 19.5 11.73
TraesCS1B01G336700.1 Wheat cytosol 21.32 11.72
HORVU2Hr1G022620.8 Barley cytosol 23.13 11.71
TraesCS6B01G447800.1 Wheat cytosol 14.06 11.65
PGSC0003DMT400019304 Potato cytosol 23.13 11.6
TraesCS7B01G501000.1 Wheat cytosol 22.9 11.56
PGSC0003DMT400041023 Potato cytosol 21.77 11.47
TraesCS2D01G510000.1 Wheat cytosol 19.95 11.43
TraesCS2D01G481300.1 Wheat cytosol 24.72 11.39
HORVU1Hr1G075170.1 Barley cytosol 22.45 11.38
TraesCS7B01G501100.1 Wheat cytosol 22.45 11.37
TraesCS7B01G500900.1 Wheat cytosol 22.45 11.31
TraesCS7A01G561700.1 Wheat cytosol 22.22 11.29
PGSC0003DMT400050826 Potato cytosol 23.13 11.23
PGSC0003DMT400019327 Potato cytosol, extracellular 12.24 11.23
PGSC0003DMT400019301 Potato cytosol 21.54 11.22
TraesCS1D01G324700.2 Wheat cytosol 22.0 11.15
TraesCS7D01G548100.1 Wheat cytosol 22.45 11.14
TraesCS1A01G323600.1 Wheat cytosol 21.77 11.02
TraesCS7B01G501900.1 Wheat cytosol 21.77 11.02
TraesCS5A01G261700.1 Wheat cytosol 21.77 10.9
TraesCS7A01G561900.4 Wheat cytosol 22.68 10.89
Os10t0183000-01 Rice plasma membrane 22.0 10.85
TraesCS6A01G403900.1 Wheat plasma membrane, vacuole 18.59 10.83
PGSC0003DMT400005052 Potato plastid 18.14 10.8
TraesCS6D01G387500.1 Wheat cytosol, plastid 19.27 10.75
HORVU5Hr1G072540.26 Barley cytosol 21.32 10.69
TraesCS6B01G448100.1 Wheat cytosol 19.05 10.66
PGSC0003DMT400046494 Potato cytosol 6.58 10.58
TraesCS5A01G261600.1 Wheat cytosol 21.09 10.56
TraesCS5B01G259900.1 Wheat cytosol 22.22 10.55
TraesCS6B01G448300.2 Wheat cytosol, peroxisome, plasma membrane 18.82 10.49
PGSC0003DMT400048669 Potato cytosol 4.99 10.43
PGSC0003DMT400021403 Potato cytosol 22.45 10.42
TraesCS7B01G449900.2 Wheat cytosol 20.86 10.4
PGSC0003DMT400025432 Potato cytosol 15.65 10.12
Os03t0709200-01 Rice cytosol 22.0 10.11
Zm00001d045512_P001 Maize cytosol, mitochondrion 19.05 10.08
TraesCS2D01G510100.1 Wheat cytosol 11.11 10.06
TraesCS2A01G459100.1 Wheat plastid 17.46 9.69
VIT_15s0045g00880.t01 Wine grape cytosol 16.55 9.67
PGSC0003DMT400076082 Potato cytosol 14.29 9.46
PGSC0003DMT400059833 Potato cytosol 9.3 9.38
VIT_15s0045g00680.t01 Wine grape cytosol 16.33 9.31
TraesCS6B01G448400.1 Wheat cytosol 17.46 9.08
PGSC0003DMT400030022 Potato cytosol 9.98 8.4
PGSC0003DMT400027536 Potato cytosol 10.66 7.53
PGSC0003DMT400062762 Potato plastid 6.58 7.32
PGSC0003DMT400062766 Potato cytosol 6.58 5.39
PGSC0003DMT400010987 Potato cytosol 1.36 3.12
VIT_15s0045g00810.t01 Wine grape cytosol 2.72 2.82
VIT_15s0045g00640.t01 Wine grape cytosol 2.49 2.28
VIT_15s0045g00920.t01 Wine grape cytosol 1.81 1.54
PGSC0003DMT400005732 Potato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 0.68 1.08
PGSC0003DMT400005046 Potato cytosol, extracellular 0.45 0.92
TraesCS7B01G501300.1 Wheat cytosol 0.23 0.36
VIT_15s0021g00130.t01 Wine grape cytosol, nucleus, plastid 0.23 0.32
PGSC0003DMT400019678 Potato cytosol, extracellular 0.23 0.32
PGSC0003DMT400068337 Potato extracellular 0.0 0.0
TraesCS2A01G129300.1 Wheat cytosol 0.0 0.0
TraesCS6B01G448000.1 Wheat cytosol 0.0 0.0
VIT_15s0045g01010.t01 Wine grape cytosol 0.0 0.0
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.80.10.10MapMan:35.1GO:GO:0000166GO:GO:0003674GO:GO:0005488
GO:GO:0006950GO:GO:0006952GO:GO:0008150GO:GO:0043531InterPro:IPR032675InterPro:IPR036388
InterPro:LRR_dom_sfUniProt:M1ADC1InterPro:NB-ARCInterPro:P-loop_NTPasePFAM:PF00931EnsemblPlantsGene:PGSC0003DMG400007869
PGSC:PGSC0003DMG400007869EnsemblPlants:PGSC0003DMT400020346PANTHER:PTHR43886SUPFAM:SSF52058SUPFAM:SSF52540UniParc:UPI000295BAA5
InterPro:WH-like_DNA-bd_sfSEG:seg::::
Description
RGC1 [Source:PGSC_GENE;Acc:PGSC0003DMG400007869]
Coordinates
chr12:-:1723956..1725569
Molecular Weight (calculated)
51028.6 Da
IEP (calculated)
5.853
GRAVY (calculated)
-0.132
Length
441 amino acids
Sequence
(BLAST)
001: MNFDESWNLL HKKIFEKEGS YSPEFENIGK QIALKCGGLP LEITLIAGLL SKISKTLDEW QNVAENVSSV VSRDLEAKCM RVLALSYHHL PSHLKPCFLY
101: FAIFAEDERI YVNALVELWA VEGFLNEEEG KSIEEVAETC INELVDRSLI SIHNLSFDGE IERCGMHDVI RELCLREARN MNFVNVIRGK SDQNSCAQSM
201: QCSFKSRSRI SIYKKEELAW CRNSEAHSII MLGGLKCFTL ELSFKLVRVL DLGLNIYPIF PSGVLSLIHL RYLSLCFYPC LKQYRGSLKA VPSSIIDIPL
301: SISSLCYLQT FKFNFPFRDC AYPFILPSEI LTMPQLRKLC MGWNYLQSHE PTENRLVLKS LQCLNQLNPW YCTGSFFRLF PNLKKLKVFG VPEDFRNHKD
401: LYDFRYLYQL EKLVFDTVTT DEDDDDDDFE KEVASCRNND K
Best Arabidopsis Sequence Match ( AT1G50180.1 )
(BLAST)
001: MAEAIVSVTV QKLGQLLLEE PLFLFGIGDQ VKQLQDELKR LNCFLKDADE KQHESERVRN WVAGIREASY DAEDILEAFF LKAESRKQKG MKRVLRRLAC
101: ILNEAVSLHS VGSEIREITS RLSKIAASML DFGIKESMGR EGLSLSDSLR EQRQSFPYVV EHNLVGLEQS LEKLVNDLVS GGEKLRVTSI CGMGGLGKTT
201: LAKQIFHHHK VRRHFDRFAW VYVSQDCRRR HVWQDIFLNL SYKDENQRIL SLRDEQLGEE LHRFLKRNKC LIVLDDIWGK DAWDCLKHVF PHETGSEIIL
301: TTRNKEVALY ADPRGVLHEP QLLTCEESWE LLEKISLSGR ENIEPMLVKK MEEIGKQIVV RCGGLPLAIT VLGGLLATKS TWNEWQRVCE NIKSYVSNGG
401: SSNGSKNMLV ADVLCLSYEY LPPHVKQCFL YFAHYPEDYE VHVGTLVSYC IAEGMVMPVK HTEAGTTVED VGQDYLEELV KRSMVMVGRR DIVTSEVMTC
501: RMHDLMREVC LQKAKQESFV QVIDSRDQDE AEAFISLSTN TSRRISVQLH GGAEEHHIKS LSQVSFRKMK LLRVLDLEGA QIEGGKLPDD VGDLIHLRNL
601: SVRLTNVKEL TSSIGNLKLM ITLDLFVKGQ LYIPNQLWDF PVGKCNPRDL LAMTSLRRLS INLSSQNTDF VVVSSLSKVL KRLRGLTINV PCEPMLPPVD
701: VTQLVSAFTN LCELELFLKL EKLPGEQSFS SDLGALRLWQ CGLVDDPFMV LEKLPNLKIL QLFEGSFVGS KLCCSKNLEN LEEWTVEDGA MMRLVTVELK
801: CCNKLKSVPE GTRFLKNLQE VEIGNRTKAF KDKLISGGED FYKVQHVPCV VFENCEL
Arabidopsis Description
Putative disease resistance protein At1g50180 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX38]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.