Factsheet for PGSC0003DMT400051415

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400025440	Potato	cytosol, mitochondrion	62.4	64.67
PGSC0003DMT400058642	Potato	cytosol	58.68	62.42
PGSC0003DMT400025439	Potato	cytosol	45.45	40.0
PGSC0003DMT400046497	Potato	cytosol	26.65	39.57
PGSC0003DMT400005040	Potato	cytosol, nucleus, peroxisome	42.98	36.3
PGSC0003DMT400025432	Potato	cytosol	48.55	34.46
PGSC0003DMT400019683	Potato	cytosol, mitochondrion	33.68	33.0
PGSC0003DMT400047508	Potato	cytosol	26.86	32.58
PGSC0003DMT400005733	Potato	cytosol	35.12	32.32
PGSC0003DMT400005041	Potato	cytosol	39.67	31.68
PGSC0003DMT400020346	Potato	cytosol	27.27	29.93
PGSC0003DMT400056267	Potato	cytosol	28.1	29.82
PGSC0003DMT400078332	Potato	cytosol	27.89	29.67
PGSC0003DMT400094032	Potato	cytosol	22.52	27.88
PGSC0003DMT400069012	Potato	cytosol	30.79	26.65
PGSC0003DMT400012479	Potato	cytosol	34.3	25.23
PGSC0003DMT400005032	Potato	cytosol	30.17	24.96
PGSC0003DMT400005012	Potato	cytosol	17.77	24.86
PGSC0003DMT400012121	Potato	extracellular, golgi	27.69	24.59
PGSC0003DMT400036070	Potato	cytosol, plastid	44.63	23.33
PGSC0003DMT400058647	Potato	cytosol, nucleus	29.96	23.31
PGSC0003DMT400005017	Potato	cytosol, plastid	40.5	22.2
PGSC0003DMT400062366	Potato	cytosol	16.94	21.98
VIT_16s0022g01330.t01	Wine grape	cytosol	28.72	21.96
PGSC0003DMT400005013	Potato	plastid	39.88	21.91
PGSC0003DMT400002788	Potato	cytosol	38.02	21.62
PGSC0003DMT400030031	Potato	cytosol	14.26	21.5
PGSC0003DMT400019329	Potato	cytosol	32.02	21.12
PGSC0003DMT400005006	Potato	vacuole	38.64	20.99
PGSC0003DMT400078333	Potato	cytosol, vacuole	37.4	20.9
PGSC0003DMT400050509	Potato	cytosol	37.6	20.78
VIT_15s0045g01020.t01	Wine grape	cytosol	27.48	20.68
PGSC0003DMT400030040	Potato	cytosol	25.41	20.23
PGSC0003DMT400093366	Potato	cytosol	29.96	20.03
PGSC0003DMT400056264	Potato	endoplasmic reticulum	36.57	19.95
PGSC0003DMT400005011	Potato	cytosol, plastid	24.38	19.93
PGSC0003DMT400005052	Potato	plastid	30.37	19.84
TraesCS7B01G501200.1	Wheat	cytosol	22.52	19.82
PGSC0003DMT400078334	Potato	cytosol, plastid	37.19	19.57
PGSC0003DMT400019300	Potato	cytosol, plasma membrane, plastid	27.27	19.38
PGSC0003DMT400062184	Potato	cytosol	34.71	19.35
PGSC0003DMT400010966	Potato	cytosol	32.85	19.23
PGSC0003DMT400059836	Potato	cytosol	15.5	19.18
PGSC0003DMT400010970	Potato	plasma membrane	32.64	19.17
PGSC0003DMT400017538	Potato	nucleus	35.12	19.14
PGSC0003DMT400012486	Potato	cytosol	34.3	18.99
PGSC0003DMT400066996	Potato	cytosol	34.3	18.74
PGSC0003DMT400080647	Potato	cytosol	34.92	18.72
PGSC0003DMT400062180	Potato	cytosol	32.44	18.62
PGSC0003DMT400088449	Potato	cytosol	34.92	18.57
PGSC0003DMT400020350	Potato	cytosol, nucleus, plasma membrane	33.26	18.44
PGSC0003DMT400020353	Potato	cytosol, nucleus, plastid	34.09	18.25
GSMUA_Achr7P20240_001	Banana	mitochondrion	26.24	18.17
PGSC0003DMT400066993	Potato	cytosol, plasma membrane	34.09	18.09
PGSC0003DMT400047502	Potato	cytosol	35.54	18.09
PGSC0003DMT400050805	Potato	cytosol	33.06	18.08
PGSC0003DMT400056268	Potato	cytosol	22.93	18.08
PGSC0003DMT400034063	Potato	cytosol	30.17	18.07
PGSC0003DMT400050821	Potato	cytosol	32.64	17.87
PGSC0003DMT400007570	Potato	cytosol	33.47	17.84
PGSC0003DMT400042194	Potato	cytosol	34.5	17.75
PGSC0003DMT400060798	Potato	cytosol	29.75	17.71
TraesCS6D01G387400.1	Wheat	cytosol	20.87	17.69
PGSC0003DMT400019304	Potato	cytosol	32.02	17.63
PGSC0003DMT400075885	Potato	cytosol, plastid	32.02	17.47
PGSC0003DMT400020342	Potato	cytosol	32.64	17.44
PGSC0003DMT400005034	Potato	plastid	14.67	17.4
TraesCS6A01G404000.1	Wheat	cytosol	19.63	17.37
PGSC0003DMT400041023	Potato	cytosol	29.96	17.32
PGSC0003DMT400082507	Potato	cytosol	12.81	17.08
PGSC0003DMT400036104	Potato	extracellular, plasma membrane	12.19	17.0
PGSC0003DMT400047510	Potato	nucleus	35.54	16.93
PGSC0003DMT400031120	Potato	cytosol	10.54	16.67
PGSC0003DMT400020349	Potato	cytosol	32.64	16.63
KRH01598	Soybean	cytosol	30.17	16.52
PGSC0003DMT400020360	Potato	cytosol	32.44	16.46
GSMUA_AchrUn_...	Banana	cytosol	9.3	16.42
PGSC0003DMT400050826	Potato	cytosol	30.58	16.3
KRG88521	Soybean	cytosol	28.72	16.13
VIT_15s0046g02800.t01	Wine grape	cytosol	22.73	16.04
PGSC0003DMT400031116	Potato	cytosol	25.62	15.92
KRH17117	Soybean	cytosol	28.72	15.85
VIT_15s0046g03660.t01	Wine grape	cytosol	27.48	15.81
VIT_15s0045g00980.t01	Wine grape	cytosol	19.42	15.75
KRH01595	Soybean	cytosol	29.13	15.74
TraesCS2D01G510300.1	Wheat	cytosol	17.77	15.72
PGSC0003DMT400019301	Potato	cytosol	27.27	15.58
KRH45220	Soybean	cytosol, extracellular, plastid	28.72	15.55
PGSC0003DMT400016712	Potato	cytosol	26.45	15.24
TraesCS2B01G507000.1	Wheat	cytosol	22.93	15.18
VIT_15s0046g02750.t01	Wine grape	cytosol	29.34	15.17
VIT_15s0046g02730.t01	Wine grape	cytosol	28.72	15.11
VIT_15s0046g02820.t01	Wine grape	cytosol	29.13	14.94
VIT_00s0448g00020.t01	Wine grape	cytosol	28.93	14.85
PGSC0003DMT400030011	Potato	cytosol	25.83	14.85
KRH01534	Soybean	cytosol	25.62	14.83
PGSC0003DMT400030044	Potato	mitochondrion	26.03	14.81
PGSC0003DMT400031132	Potato	cytosol	24.38	14.75
VIT_15s0046g02810.t01	Wine grape	cytosol	28.51	14.73
PGSC0003DMT400016707	Potato	cytosol	25.83	14.71
PGSC0003DMT400030034	Potato	cytosol	25.41	14.66
PGSC0003DMT400027529	Potato	cytosol	26.65	14.61
PGSC0003DMT400030030	Potato	nucleus	22.11	14.56
KRH23932	Soybean	cytosol	27.89	14.53
PGSC0003DMT400082505	Potato	cytosol	13.22	14.51
PGSC0003DMT400031142	Potato	cytosol	25.0	14.51
PGSC0003DMT400030019	Potato	cytosol	25.0	14.34
PGSC0003DMT400030042	Potato	cytosol	25.41	14.3
PGSC0003DMT400076082	Potato	cytosol	19.42	14.11
GSMUA_Achr7P20230_001	Banana	cytosol	25.83	14.08
GSMUA_Achr7P20220_001	Banana	cytosol	26.03	14.02
GSMUA_AchrUn_...	Banana	cytosol	21.69	14.0
PGSC0003DMT400021403	Potato	cytosol	27.27	13.89
PGSC0003DMT400062272	Potato	cytosol	14.46	13.86
TraesCS2B01G151600.2	Wheat	cytosol	23.76	13.58
PGSC0003DMT400019327	Potato	cytosol, extracellular	13.43	13.51
TraesCS7B01G500700.1	Wheat	cytosol	23.55	13.43
TraesCS6B01G447900.1	Wheat	cytosol	20.25	13.37
Os10t0183000-01	Rice	plasma membrane	24.59	13.31
TraesCS1B01G336700.1	Wheat	cytosol	21.9	13.22
TraesCS2A01G477200.1	Wheat	cytosol	18.18	13.02
PGSC0003DMT400075439	Potato	cytosol	25.62	12.97
PGSC0003DMT400030826	Potato	cytosol	12.6	12.92
PGSC0003DMT400082452	Potato	cytosol	13.43	12.92
TraesCS6D01G387500.1	Wheat	cytosol, plastid	21.07	12.9
Os11t0633500-01	Rice	cytosol	14.05	12.88
OQU82378	Sorghum	nucleus	22.11	12.77
HORVU2Hr1G022620.8	Barley	cytosol	22.93	12.74
TraesCS6A01G403900.1	Wheat	plasma membrane, vacuole	19.63	12.55
VIT_15s0045g00680.t01	Wine grape	cytosol	20.04	12.55
TraesCS7B01G423500.1	Wheat	cytosol	22.31	12.47
TraesCS6B01G448100.1	Wheat	cytosol	20.25	12.44
Os03t0709200-01	Rice	cytosol	24.59	12.41
TraesCS7B01G501100.1	Wheat	cytosol	22.31	12.4
TraesCS7B01G501000.1	Wheat	cytosol	22.31	12.36
TraesCS7A01G561700.1	Wheat	cytosol	22.11	12.33
TraesCS7A01G562000.1	Wheat	cytosol	22.11	12.23
TraesCS5D01G269100.1	Wheat	cytosol	17.36	12.19
TraesCS7A01G562500.1	Wheat	cytosol	13.84	12.07
TraesCS7B01G500800.1	Wheat	cytosol	17.98	12.07
HORVU5Hr1G072540.26	Barley	cytosol	21.9	12.06
TraesCS7D01G548100.1	Wheat	cytosol	22.11	12.04
TraesCS6B01G447800.1	Wheat	cytosol	13.22	12.03
TraesCS6B01G448300.2	Wheat	cytosol, peroxisome, plasma membrane	19.63	12.01
TraesCS2D01G510000.1	Wheat	cytosol	19.01	11.95
TraesCS7B01G501900.1	Wheat	cytosol	21.49	11.94
TraesCS2B01G507100.1	Wheat	cytosol	23.35	11.91
TraesCS7A01G561900.4	Wheat	cytosol	22.52	11.87
TraesCS1D01G324700.2	Wheat	cytosol	21.28	11.84
TraesCS2D01G481300.1	Wheat	cytosol	23.35	11.81
TraesCS5A01G261700.1	Wheat	cytosol	21.49	11.8
TraesCS7B01G449900.2	Wheat	cytosol	21.49	11.75
PGSC0003DMT400036058	Potato	cytosol	18.59	11.73
HORVU1Hr1G075170.1	Barley	cytosol	21.07	11.72
TraesCS1A01G323600.1	Wheat	cytosol	21.07	11.71
TraesCS2A01G459100.1	Wheat	plastid	19.21	11.7
TraesCS7B01G500900.1	Wheat	cytosol	20.87	11.54
TraesCS5A01G261600.1	Wheat	cytosol	20.87	11.46
TraesCS2B01G536900.1	Wheat	cytosol	13.02	11.39
PGSC0003DMT400046494	Potato	cytosol	6.4	11.31
KRG88520	Soybean	plastid	8.06	11.24
TraesCS5B01G259900.1	Wheat	cytosol	21.49	11.19
Zm00001d045512_P001	Maize	cytosol, mitochondrion	18.8	10.92
VIT_15s0045g00880.t01	Wine grape	cytosol	16.94	10.86
TraesCS6B01G448400.1	Wheat	cytosol	19.01	10.85
TraesCS2D01G510100.1	Wheat	cytosol	10.54	10.47
PGSC0003DMT400030022	Potato	cytosol	10.74	9.92
PGSC0003DMT400059833	Potato	cytosol	8.68	9.61
PGSC0003DMT400062766	Potato	cytosol	10.54	9.48
PGSC0003DMT400048669	Potato	cytosol	3.93	9.0
PGSC0003DMT400027536	Potato	cytosol	10.74	8.33
VIT_15s0045g00810.t01	Wine grape	cytosol	6.82	7.75
PGSC0003DMT400062762	Potato	plastid	6.2	7.58
VIT_15s0045g00640.t01	Wine grape	cytosol	6.4	6.42
VIT_15s0045g00920.t01	Wine grape	cytosol	5.79	5.38
PGSC0003DMT400005732	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	1.03	1.79
PGSC0003DMT400010987	Potato	cytosol	0.62	1.56
TraesCS7B01G501300.1	Wheat	cytosol	0.41	0.72
PGSC0003DMT400019678	Potato	cytosol, extracellular	0.41	0.63
PGSC0003DMT400005046	Potato	cytosol, extracellular	0.21	0.46
PGSC0003DMT400068337	Potato	extracellular	0.0	0.0
TraesCS2A01G129300.1	Wheat	cytosol	0.0	0.0
TraesCS6B01G448000.1	Wheat	cytosol	0.0	0.0
VIT_15s0021g00130.t01	Wine grape	cytosol, nucleus, plastid	0.0	0.0
VIT_15s0045g01010.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400051415	EnsemblPlantsGene:PGSC0003DMG400019970	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:NB-ARC	InterPro:P-loop_NTPase	PANTHER:PTHR43886	PANTHER:PTHR43886:SF17	PFAM:PF00931	PGSC:PGSC0003DMG400019970
SUPFAM:SSF52047	SUPFAM:SSF52540	UniParc:UPI000294EEFA	UniProt:M1BRP9	MapMan:35.1	:

Description

RGC1 [Source:PGSC_GENE;Acc:PGSC0003DMG400019970]

Coordinates

chr1:+:524773..526943

Molecular Weight (calculated)

56121.6 Da

IEP (calculated)

7.910

GRAVY (calculated)

-0.093

Length

484 amino acids

Sequence
(BLAST)

001: MEESWTLLRD KVFGNGGYPP ELEKIGRYIG HQCQGLPLAV VAIGGLLSKM SKETSSWENV AEKVGSLMTS DTMDCLNILS LSYNHLPQYL KTCFLYMGVF
101: AETREIPVWK LIKLWIAEGF VKRVNHKNLE DVAEENLREL VDRSLVLVGK HTSLGKIKTC KMHDLVRDMC LREVQYENFI HFKTRYDYDD LLENISCLRR
201: VADFHKYTHS GLSKLMPLTR SVFFKYPYFF CYLSQSSFRL LRILDVCFTC FFSCSQSVSE LVHLRYIACP SFNGLVQSLC KLRNIQNLVI HDSHPFGSSM
301: RTQSLPWEVV NMPQLKHIHT KKLSLFISPP TSVLISEREN HLQTLTGLMP SSCNDEVFLR IPNLKKLGIL IVDESDTIQK CYCLDNLVHL TQLEKLKVEV
401: SESYLLIFMR ISEGWVDIPH CDNFPPNLKK LTLCRTHLQW EDMNILSKLP NLEVLKLKHH AFHGLIWKLS HEDEDGFLKL KFYS

Best Arabidopsis Sequence Match ( AT3G46730.1 )
(BLAST)

001: MVDAVTGFVL NKIGGYLINE VLALMGVKDD LEELKTELTC IHGYLKDVEA REREDEVSKE WTKLVLDIAY DIEDVLDTYF LKLEERSLRR GLLRLTNKIG
101: KKRDAYNIVE DIRTLKRRIL DITRKRETFG IGSFNEPRGE NITNVRVRQL RRAPPVDQEE LVVGLEDDVK ILLVKLLSDN EKDKSYIISI FGMGGLGKTA
201: LARKLYNSGD VKRRFDCRAW TYVSQEYKTR DILIRIIRSL GIVSAEEMEK IKMFEEDEEL EVYLYGLLEG KNYMVVVDDV WDPDAWESLK RALPCDHRGS
301: KVIITTRIRA IAEGVEGTVY AHKLRFLTFE ESWTLFERKA FSNIEKVDED LQRTGKEMVK KCGGLPLAIV VLSGLLSRKR TNEWHEVCAS LWRRLKDNSI
401: HISTVFDLSF KEMRHELKLC FLYFSVFPED YEIKVEKLIH LLVAEGFIQE DEEMMMEDVA RCYIDELVDR SLVKAERIER GKVMSCRIHD LLRDLAIKKA
501: KELNFVNVYN EKQHSSDICR REVVHHLMND YYLCDRRVNK RMRSFLFIGE RRGFGYVNTT NLKLKLLRVL NMEGLLFVSK NISNTLPDVI GELIHLRYLG
601: IADTYVSILP ASISNLRFLQ TLDASGNDPF QYTTDLSKLT SLRHVIGKFV GECLIGEGVN LQTLRSISSY SWSKLNHELL RNLQDLEIYD HSKWVDQRRV
701: PLNFVSFSKP KNLRVLKLEM RNFKLSSESR TTIGLVDVNF PSLESLTLVG TTLEENSMPA LQKLPRLEDL VLKDCNYSGV KIMSISAQGF GRLKNLEMSM
801: ERRGHGLDEL RIEEEAMPSL IKLTVKGRLE LTKLMIPDRL KAFVRRN

Arabidopsis Description

RPP13L3Putative disease resistance RPP13-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9STE7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.