Factsheet for PGSC0003DMT400047510

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400047502	Potato	cytosol	73.33	78.34
Solyc08g005500.2.1	Tomato	cytosol	54.04	75.1
PGSC0003DMT400047508	Potato	cytosol	25.0	63.66
PGSC0003DMT400012121	Potato	extracellular, golgi	29.92	55.78
PGSC0003DMT400010987	Potato	cytosol	9.35	49.48
PGSC0003DMT400062366	Potato	cytosol	16.73	45.58
PGSC0003DMT400050821	Potato	cytosol	39.37	45.25
PGSC0003DMT400050805	Potato	cytosol	39.27	45.08
PGSC0003DMT400036104	Potato	extracellular, plasma membrane	14.47	42.36
PGSC0003DMT400005012	Potato	cytosol	13.68	40.17
PGSC0003DMT400012479	Potato	cytosol	24.02	37.08
PGSC0003DMT400005041	Potato	cytosol	21.95	36.8
PGSC0003DMT400005034	Potato	plastid	14.47	36.03
PGSC0003DMT400025440	Potato	cytosol, mitochondrion	16.54	35.97
PGSC0003DMT400005040	Potato	cytosol, nucleus, peroxisome	20.28	35.95
PGSC0003DMT400048669	Potato	cytosol	7.38	35.55
PGSC0003DMT400051415	Potato	cytosol	16.93	35.54
PGSC0003DMT400010966	Potato	cytosol	28.84	35.43
PGSC0003DMT400005032	Potato	cytosol	20.37	35.38
PGSC0003DMT400020353	Potato	cytosol, nucleus, plastid	31.4	35.29
PGSC0003DMT400025439	Potato	cytosol	19.09	35.27
PGSC0003DMT400046494	Potato	cytosol	9.45	35.04
PGSC0003DMT400007570	Potato	cytosol	31.3	35.02
PGSC0003DMT400020342	Potato	cytosol	31.1	34.88
PGSC0003DMT400010970	Potato	plasma membrane	28.15	34.71
PGSC0003DMT400060798	Potato	cytosol	27.76	34.69
PGSC0003DMT400025432	Potato	cytosol	23.23	34.6
PGSC0003DMT400036070	Potato	cytosol, plastid	31.4	34.45
PGSC0003DMT400076082	Potato	cytosol	22.54	34.38
PGSC0003DMT400062180	Potato	cytosol	28.35	34.16
PGSC0003DMT400020349	Potato	cytosol	31.89	34.11
PGSC0003DMT400012486	Potato	cytosol	29.33	34.1
PGSC0003DMT400046497	Potato	cytosol	10.93	34.05
PGSC0003DMT400050509	Potato	cytosol	29.23	33.9
PGSC0003DMT400020360	Potato	cytosol	31.59	33.65
PGSC0003DMT400056264	Potato	endoplasmic reticulum	29.33	33.6
PGSC0003DMT400068337	Potato	extracellular	8.46	33.46
PGSC0003DMT400093366	Potato	cytosol	23.72	33.29
PGSC0003DMT400017538	Potato	nucleus	29.04	33.22
PGSC0003DMT400005013	Potato	plastid	28.74	33.14
PGSC0003DMT400078333	Potato	cytosol, vacuole	28.25	33.14
PGSC0003DMT400062762	Potato	plastid	12.89	33.08
PGSC0003DMT400034063	Potato	cytosol	26.28	33.04
PGSC0003DMT400005052	Potato	plastid	23.92	32.79
PGSC0003DMT400002788	Potato	cytosol	27.46	32.78
PGSC0003DMT400005011	Potato	cytosol, plastid	19.09	32.77
PGSC0003DMT400058642	Potato	cytosol	14.67	32.75
PGSC0003DMT400062184	Potato	cytosol	27.95	32.72
PGSC0003DMT400056267	Potato	cytosol	14.67	32.68
PGSC0003DMT400062766	Potato	cytosol	17.22	32.53
PGSC0003DMT400020346	Potato	cytosol	13.98	32.2
PGSC0003DMT400005017	Potato	cytosol, plastid	27.66	31.82
PGSC0003DMT400019683	Potato	cytosol, mitochondrion	15.45	31.78
PGSC0003DMT400030031	Potato	cytosol	10.04	31.78
PGSC0003DMT400005006	Potato	vacuole	27.85	31.76
PGSC0003DMT400005733	Potato	cytosol	16.34	31.56
PGSC0003DMT400056268	Potato	cytosol	19.0	31.43
PGSC0003DMT400082507	Potato	cytosol	11.22	31.41
PGSC0003DMT400042194	Potato	cytosol	28.94	31.24
PGSC0003DMT400078332	Potato	cytosol	13.88	30.99
PGSC0003DMT400094032	Potato	cytosol	11.91	30.95
PGSC0003DMT400078334	Potato	cytosol, plastid	27.95	30.87
PGSC0003DMT400066996	Potato	cytosol	26.57	30.47
PGSC0003DMT400080647	Potato	cytosol	26.67	30.01
PGSC0003DMT400088449	Potato	cytosol	26.77	29.89
PGSC0003DMT400069012	Potato	cytosol	16.44	29.87
VIT_16s0022g01330.t01	Wine grape	cytosol	18.6	29.86
PGSC0003DMT400005732	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	8.07	29.39
PGSC0003DMT400066993	Potato	cytosol, plasma membrane	25.98	28.95
PGSC0003DMT400019329	Potato	cytosol	20.87	28.88
GSMUA_AchrUn_...	Banana	cytosol	7.68	28.47
PGSC0003DMT400030826	Potato	cytosol	13.19	28.39
VIT_15s0045g00980.t01	Wine grape	cytosol	16.63	28.31
PGSC0003DMT400036058	Potato	cytosol	21.26	28.16
VIT_15s0045g01020.t01	Wine grape	cytosol	17.72	27.99
PGSC0003DMT400005046	Potato	cytosol, extracellular	6.0	27.98
PGSC0003DMT400075885	Potato	cytosol, plastid	24.11	27.62
PGSC0003DMT400062272	Potato	cytosol	13.68	27.52
PGSC0003DMT400030040	Potato	cytosol	16.44	27.47
PGSC0003DMT400082452	Potato	cytosol	13.58	27.44
KRG88521	Soybean	cytosol	23.03	27.15
PGSC0003DMT400041023	Potato	cytosol	22.34	27.12
GSMUA_Achr7P20240_001	Banana	mitochondrion	18.6	27.04
KRH17117	Soybean	cytosol	23.33	27.02
KRG88520	Soybean	plastid	9.15	26.8
PGSC0003DMT400082505	Potato	cytosol	11.61	26.76
KRH01534	Soybean	cytosol	21.95	26.67
PGSC0003DMT400019300	Potato	cytosol, plasma membrane, plastid	17.62	26.28
PGSC0003DMT400058647	Potato	cytosol, nucleus	16.04	26.21
VIT_15s0046g02800.t01	Wine grape	cytosol	17.62	26.09
PGSC0003DMT400019304	Potato	cytosol	22.54	26.05
PGSC0003DMT400019327	Potato	cytosol, extracellular	12.3	25.99
TraesCS2D01G510300.1	Wheat	cytosol	13.98	25.96
PGSC0003DMT400059833	Potato	cytosol	11.12	25.86
PGSC0003DMT400050826	Potato	cytosol	23.03	25.77
PGSC0003DMT400031116	Potato	cytosol	19.68	25.67
PGSC0003DMT400027529	Potato	cytosol	22.15	25.48
TraesCS6A01G404000.1	Wheat	cytosol	13.58	25.23
KRH01598	Soybean	cytosol	21.95	25.23
TraesCS7A01G562500.1	Wheat	cytosol	13.78	25.23
PGSC0003DMT400030034	Potato	cytosol	20.77	25.15
TraesCS6D01G387400.1	Wheat	cytosol	14.07	25.04
Os11t0633500-01	Rice	cytosol	12.99	25.0
TraesCS2A01G477200.1	Wheat	cytosol	16.54	24.85
PGSC0003DMT400016707	Potato	cytosol	20.77	24.82
GSMUA_Achr7P20220_001	Banana	cytosol	21.95	24.81
TraesCS2B01G151600.2	Wheat	cytosol	20.67	24.79
KRH01595	Soybean	cytosol	21.85	24.78
VIT_15s0046g03660.t01	Wine grape	cytosol	20.47	24.73
KRH45220	Soybean	cytosol, extracellular, plastid	21.75	24.72
PGSC0003DMT400019301	Potato	cytosol	20.57	24.68
PGSC0003DMT400030019	Potato	cytosol	20.47	24.64
PGSC0003DMT400016712	Potato	cytosol	20.37	24.64
PGSC0003DMT400030030	Potato	nucleus	17.82	24.63
PGSC0003DMT400030011	Potato	cytosol	20.37	24.58
GSMUA_Achr7P20230_001	Banana	cytosol	21.46	24.55
PGSC0003DMT400030042	Potato	cytosol	20.77	24.53
GSMUA_AchrUn_...	Banana	cytosol	18.11	24.53
PGSC0003DMT400031142	Potato	cytosol	20.08	24.46
TraesCS7A01G562000.1	Wheat	cytosol	21.06	24.46
TraesCS2D01G510100.1	Wheat	cytosol	11.71	24.44
HORVU2Hr1G022620.8	Barley	cytosol	20.87	24.34
PGSC0003DMT400030044	Potato	mitochondrion	20.28	24.21
TraesCS6B01G447800.1	Wheat	cytosol	12.6	24.06
VIT_15s0046g02750.t01	Wine grape	cytosol	22.15	24.04
TraesCS6B01G447900.1	Wheat	cytosol	17.32	24.01
PGSC0003DMT400031132	Potato	cytosol	18.9	24.0
TraesCS7B01G501100.1	Wheat	cytosol	20.57	24.0
TraesCS7A01G561700.1	Wheat	cytosol	20.47	23.96
TraesCS5D01G269100.1	Wheat	cytosol	16.24	23.95
TraesCS2D01G510000.1	Wheat	cytosol	18.11	23.9
TraesCS7B01G501200.1	Wheat	cytosol	12.89	23.82
KRH23932	Soybean	cytosol	21.75	23.79
TraesCS7B01G423500.1	Wheat	cytosol	20.28	23.79
TraesCS6A01G403900.1	Wheat	plasma membrane, vacuole	17.72	23.78
TraesCS6D01G387500.1	Wheat	cytosol, plastid	18.5	23.77
VIT_00s0448g00020.t01	Wine grape	cytosol	22.05	23.75
VIT_15s0046g02820.t01	Wine grape	cytosol	22.05	23.73
PGSC0003DMT400020350	Potato	cytosol, nucleus, plasma membrane	20.28	23.6
VIT_15s0046g02730.t01	Wine grape	cytosol	21.36	23.59
TraesCS1B01G336700.1	Wheat	cytosol	18.6	23.57
TraesCS7B01G500900.1	Wheat	cytosol	20.28	23.54
OQU82378	Sorghum	nucleus	19.39	23.51
TraesCS2B01G536900.1	Wheat	cytosol	12.8	23.51
TraesCS6B01G448100.1	Wheat	cytosol	18.21	23.48
TraesCS7B01G501000.1	Wheat	cytosol	20.18	23.46
TraesCS1A01G323600.1	Wheat	cytosol	20.08	23.42
TraesCS7B01G501900.1	Wheat	cytosol	20.08	23.42
TraesCS6B01G448300.2	Wheat	cytosol, peroxisome, plasma membrane	18.21	23.39
VIT_15s0046g02810.t01	Wine grape	cytosol	21.56	23.37
TraesCS7B01G500800.1	Wheat	cytosol	16.54	23.3
HORVU1Hr1G075170.1	Barley	cytosol	19.88	23.22
TraesCS1D01G324700.2	Wheat	cytosol	19.88	23.22
TraesCS7A01G561900.4	Wheat	cytosol	20.96	23.2
TraesCS7D01G548100.1	Wheat	cytosol	20.28	23.17
TraesCS7B01G500700.1	Wheat	cytosol	19.29	23.09
PGSC0003DMT400019678	Potato	cytosol, extracellular	7.19	23.03
VIT_15s0045g00680.t01	Wine grape	cytosol	17.52	23.03
PGSC0003DMT400075439	Potato	cytosol	21.56	22.91
TraesCS7B01G449900.2	Wheat	cytosol	19.88	22.82
Os10t0183000-01	Rice	plasma membrane	20.08	22.82
PGSC0003DMT400021403	Potato	cytosol	20.96	22.42
TraesCS2A01G459100.1	Wheat	plastid	17.52	22.39
VIT_15s0045g00880.t01	Wine grape	cytosol	16.63	22.38
TraesCS5A01G261700.1	Wheat	cytosol	19.39	22.36
TraesCS6B01G448400.1	Wheat	cytosol	18.6	22.29
TraesCS5A01G261600.1	Wheat	cytosol	19.09	22.02
PGSC0003DMT400059836	Potato	cytosol	8.46	21.99
PGSC0003DMT400030022	Potato	cytosol	11.32	21.95
HORVU5Hr1G072540.26	Barley	cytosol	18.9	21.84
TraesCS2B01G507000.1	Wheat	cytosol	15.65	21.75
Os03t0709200-01	Rice	cytosol	20.28	21.48
VIT_15s0045g00920.t01	Wine grape	cytosol	10.93	21.35
TraesCS5B01G259900.1	Wheat	cytosol	19.49	21.31
PGSC0003DMT400031120	Potato	cytosol	6.4	21.24
VIT_15s0021g00130.t01	Wine grape	cytosol, nucleus, plastid	6.4	20.9
TraesCS2D01G481300.1	Wheat	cytosol	19.68	20.9
TraesCS2B01G507100.1	Wheat	cytosol	19.49	20.86
Zm00001d045512_P001	Maize	cytosol, mitochondrion	17.03	20.77
TraesCS7B01G501300.1	Wheat	cytosol	5.51	20.29
TraesCS6B01G448000.1	Wheat	cytosol	5.12	19.19
VIT_15s0045g00640.t01	Wine grape	cytosol	8.86	18.63
VIT_15s0045g00810.t01	Wine grape	cytosol	7.68	18.31
TraesCS2A01G129300.1	Wheat	cytosol	4.33	17.6
PGSC0003DMT400027536	Potato	cytosol	9.94	16.19
VIT_15s0045g01010.t01	Wine grape	cytosol	2.46	12.95

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:102604806	Gene3D:3.40.50.300	MapMan:35.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0043531
InterPro:IPR036388	UniProt:M1BKW6	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	EnsemblPlantsGene:PGSC0003DMG400018464
PGSC:PGSC0003DMG400018464	EnsemblPlants:PGSC0003DMT400047510	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF17	InterPro:RX-like_CC
SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI000296AE92	InterPro:WH-like_DNA-bd_sf	RefSeq:XP_006361240.2	RefSeq:XP_015170666.1
SEG:seg	:	:	:	:	:

Description

Disease resistance protein [Source:PGSC_GENE;Acc:PGSC0003DMG400018464]

Coordinates

chr8:+:3759084..3763667

Molecular Weight (calculated)

115722.0 Da

IEP (calculated)

6.516

GRAVY (calculated)

-0.295

Length

1016 amino acids

Sequence
(BLAST)

0001: MAVYAAVTSL MGTVHLISQS SLDLQEGNKE HLESLYDKVG SLLEFLDNSD NELQKKVKDL ANEVEDEVES EMAVYAAVTS LMGTMHLLSQ SSLDLQEGNK
0101: KHLKSLYDKF GSLLEILDNS DNELQKKVKD LANEVEDEVK PQVVRIMEKK EANERLRKIL EQAIKDIANE VEDEVESQAL RIMEKEEHIR TEANKRLLII
0201: LKQAIEDIDS VKEELSKPRK NNKLQAGNGS VGGTCSPRSL VSTLENDMVG HSDEQDMVGH SDEQDMVGHS DEQERVRGEL TGDSSQLEVI SITGMGGIGK
0301: STFAKKMFSD PSIVGFFNVC GWITVSKDYS LKKMLLSLLQ DAIGVNEQLD EKPDDELADC LQKSLKKRRY LIVVDDIWSI EAWEDIRQWF PEHNNRSRIL
0401: LTTRITEVAR DASSPKKPFQ MRFLDPDESW NLFCQKAFGK NDCPAEFENV GKVIAGNCNG LPLMISVVAG SLSSEKMLRK WHEVAQSVSS LVNLDEYQRC
0501: SGVLALSYNH LPSHLKACFL YFGVFKKASE ISVENLIRLW MAEGLFKLRG IGELEKEASS LLHDLIDKSL IVACKHSLDG KIKTCRIHDL LHDLCLSESE
0601: SENLLYVSNP PTNVRQHRRW VSFHQKPMQD YFPLPFPTYG KTRSLHFLEV KPSYFRYELG LDRFKLLRVL DLLGLGLIHF PKGLSNLVSL RYLRAGFISG
0701: YLPIYKLQNL QFLSFRDVYK YTPVDLCLPD GTWKMSQLRH LDSAFFYLCP PPKVSGNKYR VLEHLQSVHG LRPECCTKEM FEGIKKVKKL GICGRASHFK
0801: DAPKKFLNNL IYLPELEALR ISLYDRSSSD FLLRQPVPCV GSFPPNLKKL TLQGTRLLWS QLTVISKLPN LEVLKLKALK LFGNELGETA WEVSKIEFPK
0901: LKFLLIEKKG LEYWTAEDDS FPCLERVIIK NCPSLQKIPQ GFADSMTLQL IELRGCSTSL VNFAREIQEE QQQRLGNNIL QVYAYDIITE AGDRSYFGLL
1001: KNWLRKMIVS LCENEF

Best Arabidopsis Sequence Match ( AT5G35450.1 )
(BLAST)

001: MAEGVVSFGV QKLWALLNRE SERLNGIDEQ VDGLKRQLRG LQSLLKDADA KKHGSDRVRN FLEDVKDLVF DAEDIIESYV LNKLRGEGKG VKNHVRRLAC
101: FLTDRHKVAS DIEGITKRIS KVIGEMQSLG IQQQIIDGGR SLSLQDIQRE IRQTFPNSSE SDLVGVEQSV EELVGPMVEI DNIQVVSISG MGGIGKTTLA
201: RQIFHHDLVR RHFDGFAWVC VSQQFTQKHV WQRILQELRP HDGEILQMDE YTIQGKLFQL LETGRYLVVL DDVWKEEDWD RIKEVFPRKR GWKMLLTSRN
301: EGVGLHADPT CLSFRARILN PKESWKLFER IVPRRNETEY EEMEAIGKEM VTYCGGLPLA VKVLGGLLAN KHTASEWKRV SENIGAQIVG KSCLDDNSLN
401: SVYRILSLSY EDLPTDLKHC FLYLAHFPED YKIKTRTLYS YWAAEGIYDG LTILDSGEDY LEELVRRNLV IAEKSNLSWR LKLCQMHDMM REVCISKAKV
501: ENFLQIIKVP TSTSTIIAQS PSRSRRLTVH SGKAFHILGH KKKVRSLLVL GLKEDLWIQS ASRFQSLPLL RVLDLSSVKF EGGKLPSSIG GLIHLRFLSL
601: HQAVVSHLPS TIRNLKLMLY LNLHVAIGVP VHVPNVLKEM LELRYLSLPL DMHDKTKLEL GDLVNLEYLW CFSTQHSSVT DLLRMTKLRF FGVSFSERCT
701: FENLSSSLRQ FRKLETLSFI YSRKTYMVDY VGEFVLDFIH LKKLSLGVHL SKIPDQHQLP PHIAHIYLLF CHMEEDPMPI LEKLLHLKSV ELRRKAFIGR
801: RMVCSKGGFP QLRALQISEQ SELEEWIVEE GSMPCLRDLI IHSCEKLEEL PDGLKYVTSL KELKIEGMKR EWKEKLVGED YYKVQHIPDV QFFNCDDEQR
901: E

Arabidopsis Description

RPP8L3Disease resistance RPP8-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJB5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.