Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
- mitochondrion 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400005046 | Potato | cytosol, extracellular | 60.88 | 88.53 |
| PGSC0003DMT400005732 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 63.09 | 71.68 |
| PGSC0003DMT400062762 | Potato | plastid | 63.09 | 50.51 |
| PGSC0003DMT400046494 | Potato | cytosol | 35.65 | 41.24 |
| PGSC0003DMT400005034 | Potato | plastid | 49.84 | 38.73 |
| PGSC0003DMT400005011 | Potato | cytosol, plastid | 67.51 | 36.15 |
| PGSC0003DMT400062766 | Potato | cytosol | 59.94 | 35.32 |
| PGSC0003DMT400048669 | Potato | cytosol | 23.03 | 34.6 |
| PGSC0003DMT400068337 | Potato | extracellular | 24.92 | 30.74 |
| PGSC0003DMT400005052 | Potato | plastid | 68.45 | 29.28 |
| PGSC0003DMT400005006 | Potato | vacuole | 81.39 | 28.96 |
| PGSC0003DMT400005013 | Potato | plastid | 70.66 | 25.43 |
| PGSC0003DMT400010987 | Potato | cytosol | 14.2 | 23.44 |
| PGSC0003DMT400005017 | Potato | cytosol, plastid | 61.83 | 22.2 |
| TraesCS7B01G501300.1 | Wheat | cytosol | 19.24 | 22.1 |
| TraesCS2A01G129300.1 | Wheat | cytosol | 17.35 | 22.0 |
| TraesCS6B01G448000.1 | Wheat | cytosol | 17.35 | 20.3 |
| PGSC0003DMT400002788 | Potato | cytosol | 49.21 | 18.33 |
| PGSC0003DMT400005012 | Potato | cytosol | 19.87 | 18.21 |
| VIT_15s0045g01010.t01 | Wine grape | cytosol | 11.04 | 18.13 |
| PGSC0003DMT400078333 | Potato | cytosol, vacuole | 49.53 | 18.13 |
| PGSC0003DMT400078334 | Potato | cytosol, plastid | 51.73 | 17.83 |
| VIT_15s0021g00130.t01 | Wine grape | cytosol, nucleus, plastid | 17.35 | 17.68 |
| PGSC0003DMT400025439 | Potato | cytosol | 27.44 | 15.82 |
| PGSC0003DMT400062366 | Potato | cytosol | 17.35 | 14.75 |
| PGSC0003DMT400058647 | Potato | cytosol, nucleus | 28.08 | 14.31 |
| PGSC0003DMT400036104 | Potato | extracellular, plasma membrane | 15.14 | 13.83 |
| TraesCS2D01G510100.1 | Wheat | cytosol | 20.5 | 13.35 |
| PGSC0003DMT400059833 | Potato | cytosol | 18.3 | 13.27 |
| VIT_15s0045g00920.t01 | Wine grape | cytosol | 21.77 | 13.27 |
| PGSC0003DMT400025432 | Potato | cytosol | 28.08 | 13.05 |
| PGSC0003DMT400082452 | Potato | cytosol | 20.5 | 12.92 |
| VIT_15s0045g00810.t01 | Wine grape | cytosol | 17.35 | 12.91 |
| VIT_15s0045g00640.t01 | Wine grape | cytosol | 19.56 | 12.84 |
| PGSC0003DMT400019327 | Potato | cytosol, extracellular | 19.24 | 12.68 |
| PGSC0003DMT400005032 | Potato | cytosol | 23.34 | 12.65 |
| PGSC0003DMT400076082 | Potato | cytosol | 25.87 | 12.31 |
| PGSC0003DMT400082507 | Potato | cytosol | 13.88 | 12.12 |
| PGSC0003DMT400062272 | Potato | cytosol | 19.24 | 12.08 |
| PGSC0003DMT400056268 | Potato | cytosol | 23.34 | 12.05 |
| Os11t0633500-01 | Rice | cytosol | 19.24 | 11.55 |
| PGSC0003DMT400030826 | Potato | cytosol | 16.72 | 11.23 |
| TraesCS2B01G536900.1 | Wheat | cytosol | 19.56 | 11.21 |
| PGSC0003DMT400034063 | Potato | cytosol | 28.08 | 11.01 |
| TraesCS7A01G562500.1 | Wheat | cytosol | 19.24 | 10.99 |
| VIT_15s0045g00980.t01 | Wine grape | cytosol | 20.5 | 10.89 |
| PGSC0003DMT400012486 | Potato | cytosol | 29.65 | 10.76 |
| PGSC0003DMT400060798 | Potato | cytosol | 27.44 | 10.7 |
| PGSC0003DMT400062180 | Potato | cytosol | 28.39 | 10.68 |
| PGSC0003DMT400010970 | Potato | plasma membrane | 27.44 | 10.56 |
| TraesCS6B01G447800.1 | Wheat | cytosol | 17.67 | 10.53 |
| PGSC0003DMT400017538 | Potato | nucleus | 28.71 | 10.25 |
| KRG88520 | Soybean | plastid | 11.04 | 10.09 |
| PGSC0003DMT400042194 | Potato | cytosol | 29.65 | 9.99 |
| PGSC0003DMT400036070 | Potato | cytosol, plastid | 29.02 | 9.94 |
| PGSC0003DMT400036058 | Potato | cytosol | 23.66 | 9.78 |
| PGSC0003DMT400082505 | Potato | cytosol | 13.56 | 9.75 |
| PGSC0003DMT400020342 | Potato | cytosol | 27.76 | 9.71 |
| PGSC0003DMT400020353 | Potato | cytosol, nucleus, plastid | 27.44 | 9.62 |
| GSMUA_AchrUn_... | Banana | cytosol | 8.2 | 9.49 |
| PGSC0003DMT400050509 | Potato | cytosol | 25.87 | 9.36 |
| VIT_15s0046g02800.t01 | Wine grape | cytosol | 19.87 | 9.18 |
| PGSC0003DMT400030022 | Potato | cytosol | 15.14 | 9.16 |
| PGSC0003DMT400007570 | Potato | cytosol | 25.87 | 9.03 |
| TraesCS2D01G510000.1 | Wheat | cytosol | 21.77 | 8.96 |
| VIT_15s0045g00680.t01 | Wine grape | cytosol | 21.77 | 8.93 |
| PGSC0003DMT400020349 | Potato | cytosol | 26.5 | 8.84 |
| PGSC0003DMT400093366 | Potato | cytosol | 20.19 | 8.84 |
| KRH01534 | Soybean | cytosol | 23.03 | 8.73 |
| TraesCS2A01G477200.1 | Wheat | cytosol | 18.61 | 8.73 |
| TraesCS5D01G269100.1 | Wheat | cytosol | 18.93 | 8.71 |
| PGSC0003DMT400020360 | Potato | cytosol | 26.18 | 8.7 |
| VIT_15s0045g00880.t01 | Wine grape | cytosol | 20.5 | 8.61 |
| TraesCS6A01G403900.1 | Wheat | plasma membrane, vacuole | 20.5 | 8.59 |
| PGSC0003DMT400030030 | Potato | nucleus | 19.87 | 8.57 |
| KRG88521 | Soybean | cytosol | 22.71 | 8.35 |
| TraesCS7B01G500800.1 | Wheat | cytosol | 18.93 | 8.32 |
| PGSC0003DMT400041023 | Potato | cytosol | 21.77 | 8.24 |
| PGSC0003DMT400056264 | Potato | endoplasmic reticulum | 23.03 | 8.23 |
| TraesCS6B01G448300.2 | Wheat | cytosol, peroxisome, plasma membrane | 20.5 | 8.22 |
| PGSC0003DMT400080647 | Potato | cytosol | 23.34 | 8.19 |
| PGSC0003DMT400062184 | Potato | cytosol | 22.4 | 8.18 |
| KRH45220 | Soybean | cytosol, extracellular, plastid | 23.03 | 8.17 |
| KRH17117 | Soybean | cytosol | 22.4 | 8.1 |
| PGSC0003DMT400088449 | Potato | cytosol | 23.03 | 8.02 |
| TraesCS6B01G448400.1 | Wheat | cytosol | 21.45 | 8.02 |
| PGSC0003DMT400030019 | Potato | cytosol | 21.14 | 7.94 |
| OQU82378 | Sorghum | nucleus | 20.82 | 7.88 |
| GSMUA_AchrUn_... | Banana | cytosol | 18.61 | 7.87 |
| PGSC0003DMT400030034 | Potato | cytosol | 20.82 | 7.87 |
| PGSC0003DMT400047502 | Potato | cytosol | 23.34 | 7.78 |
| TraesCS7B01G501000.1 | Wheat | cytosol | 21.45 | 7.78 |
| PGSC0003DMT400016707 | Potato | cytosol | 20.82 | 7.76 |
| TraesCS7D01G548100.1 | Wheat | cytosol | 21.77 | 7.76 |
| TraesCS6B01G448100.1 | Wheat | cytosol | 19.24 | 7.74 |
| TraesCS7A01G561700.1 | Wheat | cytosol | 21.14 | 7.72 |
| PGSC0003DMT400050826 | Potato | cytosol | 22.08 | 7.71 |
| PGSC0003DMT400025440 | Potato | cytosol, mitochondrion | 11.36 | 7.71 |
| PGSC0003DMT400058642 | Potato | cytosol | 11.04 | 7.69 |
| VIT_15s0046g02750.t01 | Wine grape | cytosol | 22.71 | 7.69 |
| PGSC0003DMT400019301 | Potato | cytosol | 20.5 | 7.67 |
| TraesCS7B01G500700.1 | Wheat | cytosol | 20.5 | 7.66 |
| KRH01595 | Soybean | cytosol | 21.45 | 7.59 |
| TraesCS6D01G387500.1 | Wheat | cytosol, plastid | 18.93 | 7.59 |
| VIT_15s0046g02810.t01 | Wine grape | cytosol | 22.4 | 7.58 |
| PGSC0003DMT400066996 | Potato | cytosol | 21.14 | 7.56 |
| TraesCS2B01G151600.2 | Wheat | cytosol | 20.19 | 7.56 |
| TraesCS7B01G423500.1 | Wheat | cytosol | 20.5 | 7.51 |
| TraesCS1B01G336700.1 | Wheat | cytosol | 18.93 | 7.48 |
| PGSC0003DMT400021403 | Potato | cytosol | 22.4 | 7.47 |
| VIT_00s0448g00020.t01 | Wine grape | cytosol | 22.08 | 7.42 |
| TraesCS7A01G561900.4 | Wheat | cytosol | 21.45 | 7.41 |
| HORVU5Hr1G072540.26 | Barley | cytosol | 20.5 | 7.39 |
| HORVU1Hr1G075170.1 | Barley | cytosol | 20.19 | 7.36 |
| TraesCS1D01G324700.2 | Wheat | cytosol | 20.19 | 7.36 |
| PGSC0003DMT400050821 | Potato | cytosol | 20.5 | 7.35 |
| PGSC0003DMT400050805 | Potato | cytosol | 20.5 | 7.34 |
| TraesCS7B01G449900.2 | Wheat | cytosol | 20.5 | 7.34 |
| PGSC0003DMT400030042 | Potato | cytosol | 19.87 | 7.33 |
| TraesCS2D01G510300.1 | Wheat | cytosol | 12.62 | 7.31 |
| VIT_15s0046g02730.t01 | Wine grape | cytosol | 21.14 | 7.28 |
| TraesCS5A01G261700.1 | Wheat | cytosol | 20.19 | 7.26 |
| PGSC0003DMT400010966 | Potato | cytosol | 18.93 | 7.26 |
| PGSC0003DMT400030011 | Potato | cytosol | 19.24 | 7.24 |
| KRH01598 | Soybean | cytosol | 20.19 | 7.24 |
| TraesCS7B01G501900.1 | Wheat | cytosol | 19.87 | 7.23 |
| PGSC0003DMT400075885 | Potato | cytosol, plastid | 20.19 | 7.22 |
| PGSC0003DMT400047510 | Potato | nucleus | 23.03 | 7.19 |
| Os10t0183000-01 | Rice | plasma membrane | 20.19 | 7.16 |
| PGSC0003DMT400066993 | Potato | cytosol, plasma membrane | 20.5 | 7.13 |
| HORVU2Hr1G022620.8 | Barley | cytosol | 19.56 | 7.12 |
| TraesCS1A01G323600.1 | Wheat | cytosol | 19.56 | 7.12 |
| VIT_15s0046g02820.t01 | Wine grape | cytosol | 21.14 | 7.1 |
| PGSC0003DMT400030044 | Potato | mitochondrion | 18.93 | 7.05 |
| PGSC0003DMT400016712 | Potato | cytosol | 18.61 | 7.02 |
| TraesCS7B01G501100.1 | Wheat | cytosol | 19.24 | 7.0 |
| TraesCS7A01G562000.1 | Wheat | cytosol | 19.24 | 6.97 |
| TraesCS7B01G500900.1 | Wheat | cytosol | 19.24 | 6.97 |
| PGSC0003DMT400019304 | Potato | cytosol | 19.24 | 6.94 |
| TraesCS5A01G261600.1 | Wheat | cytosol | 19.24 | 6.92 |
| PGSC0003DMT400027529 | Potato | cytosol | 19.24 | 6.91 |
| PGSC0003DMT400075439 | Potato | cytosol | 20.82 | 6.9 |
| VIT_15s0046g03660.t01 | Wine grape | cytosol | 18.3 | 6.9 |
| PGSC0003DMT400031132 | Potato | cytosol | 17.35 | 6.88 |
| KRH23932 | Soybean | cytosol | 19.87 | 6.78 |
| TraesCS6B01G447900.1 | Wheat | cytosol | 15.46 | 6.68 |
| TraesCS5B01G259900.1 | Wheat | cytosol | 19.56 | 6.67 |
| GSMUA_Achr7P20230_001 | Banana | cytosol | 18.61 | 6.64 |
| Os03t0709200-01 | Rice | cytosol | 19.87 | 6.57 |
| GSMUA_Achr7P20220_001 | Banana | cytosol | 18.61 | 6.56 |
| PGSC0003DMT400031142 | Potato | cytosol | 17.03 | 6.47 |
| PGSC0003DMT400031116 | Potato | cytosol | 15.46 | 6.29 |
| TraesCS2A01G459100.1 | Wheat | plastid | 15.46 | 6.16 |
| TraesCS2B01G507100.1 | Wheat | cytosol | 17.03 | 5.69 |
| PGSC0003DMT400027536 | Potato | cytosol | 11.04 | 5.61 |
| PGSC0003DMT400019329 | Potato | cytosol | 12.62 | 5.45 |
| PGSC0003DMT400019300 | Potato | cytosol, plasma membrane, plastid | 11.67 | 5.43 |
| TraesCS2D01G481300.1 | Wheat | cytosol | 16.09 | 5.33 |
| VIT_16s0022g01330.t01 | Wine grape | cytosol | 9.15 | 4.58 |
| Zm00001d045512_P001 | Maize | cytosol, mitochondrion | 11.04 | 4.2 |
| PGSC0003DMT400030031 | Potato | cytosol | 4.1 | 4.05 |
| PGSC0003DMT400012479 | Potato | cytosol | 7.26 | 3.5 |
| PGSC0003DMT400012121 | Potato | extracellular, golgi | 5.68 | 3.3 |
| GSMUA_Achr7P20240_001 | Banana | mitochondrion | 6.31 | 2.86 |
| PGSC0003DMT400005041 | Potato | cytosol | 5.36 | 2.81 |
| PGSC0003DMT400030040 | Potato | cytosol | 5.05 | 2.63 |
| Solyc10g051050.1.1 | Tomato | cytosol | 4.42 | 2.53 |
| PGSC0003DMT400005040 | Potato | cytosol, nucleus, peroxisome | 4.1 | 2.27 |
| TraesCS6D01G387400.1 | Wheat | cytosol | 3.79 | 2.1 |
| PGSC0003DMT400005733 | Potato | cytosol | 3.15 | 1.9 |
| PGSC0003DMT400019683 | Potato | cytosol, mitochondrion | 2.84 | 1.82 |
| PGSC0003DMT400078332 | Potato | cytosol | 2.21 | 1.54 |
| PGSC0003DMT400094032 | Potato | cytosol | 1.89 | 1.53 |
| TraesCS2B01G507000.1 | Wheat | cytosol | 3.47 | 1.5 |
| PGSC0003DMT400059836 | Potato | cytosol | 1.58 | 1.28 |
| VIT_15s0045g01020.t01 | Wine grape | cytosol | 2.52 | 1.24 |
| TraesCS6A01G404000.1 | Wheat | cytosol | 1.89 | 1.1 |
| TraesCS7B01G501200.1 | Wheat | cytosol | 1.58 | 0.91 |
| PGSC0003DMT400056267 | Potato | cytosol | 1.26 | 0.88 |
| PGSC0003DMT400069012 | Potato | cytosol | 1.26 | 0.72 |
| PGSC0003DMT400031120 | Potato | cytosol | 0.63 | 0.65 |
| PGSC0003DMT400046497 | Potato | cytosol | 0.63 | 0.61 |
| PGSC0003DMT400020350 | Potato | cytosol, nucleus, plasma membrane | 1.58 | 0.57 |
| PGSC0003DMT400047508 | Potato | cytosol | 0.63 | 0.5 |
| PGSC0003DMT400051415 | Potato | cytosol | 0.63 | 0.41 |
| PGSC0003DMT400020346 | Potato | cytosol | 0.32 | 0.23 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400019678 | EnsemblPlantsGene:PGSC0003DMG400007605 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0043531 | InterPro:NB-ARC | InterPro:P-loop_NTPase | InterPro:RX-like_CC | PANTHER:PTHR43886 | PANTHER:PTHR43886:SF17 |
| PFAM:PF00931 | PGSC:PGSC0003DMG400007605 | SUPFAM:SSF52540 | UniParc:UPI000296DE87 | UniProt:M1ACF4 | MapMan:35.1 |
Description
NBS-LRR protein [Source:PGSC_GENE;Acc:PGSC0003DMG400007605]
Coordinates
chr11:-:5762513..5767391
Molecular Weight (calculated)
36342.6 Da
IEP (calculated)
4.977
GRAVY (calculated)
-0.382
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYAAISSLM YTLEQLLKPN HSLVCPSSTQ QHVESLYQNL SALQDFLDDT TTKDIETLKV IEKRIRNVVY KAEDRIDSSL RSIIVADHED KRQKACTSFY
101: EELLKVEQQV YFLNKEVMLI EFNNHGSKSA ELARISSSLE KSTIEENTIV GMEDDFNIIL DRVTTQTDEL TVIPIFGMGG IGKTTLARKV YDDSYIRSRF
201: DKQAWVTISQ EYNERQMLLE LVSSITGSKK ETSDDELMEI VYRGLKEGMK DEEREGYLKE AGADYMLPHL LNFWDKKPLQ NRETVKVPLV GRVIEVSRRA
301: LMLLTHALMG FGKDPSM
101: EELLKVEQQV YFLNKEVMLI EFNNHGSKSA ELARISSSLE KSTIEENTIV GMEDDFNIIL DRVTTQTDEL TVIPIFGMGG IGKTTLARKV YDDSYIRSRF
201: DKQAWVTISQ EYNERQMLLE LVSSITGSKK ETSDDELMEI VYRGLKEGMK DEEREGYLKE AGADYMLPHL LNFWDKKPLQ NRETVKVPLV GRVIEVSRRA
301: LMLLTHALMG FGKDPSM
001: MDPARECEGK GACELKSNKR FADKIMPHLL NLYGSSAKAN DFDMYAPNAS FEDPLTHAQG VKQIKSAFYS LPKVFGESKI VEYHIQESET SPGKKEILID
101: NKQHYKIMGR NIDMISLIKL YVEDGKIVRH EDWWDKKPLR NRDTVSFPLV GRVMEMGRRG LMLATHAMMG FGKDPDSQ
101: NKQHYKIMGR NIDMISLIKL YVEDGKIVRH EDWWDKKPLR NRDTVSFPLV GRVMEMGRRG LMLATHAMMG FGKDPDSQ
Arabidopsis Description
Nuclear transport factor 2 (NTF2) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FMC7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.