Factsheet for PGSC0003DMT400007570

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400062366	Potato	cytosol	28.19	68.63
PGSC0003DMT400010987	Potato	cytosol	13.88	65.62
PGSC0003DMT400036104	Potato	extracellular, plasma membrane	25.0	65.42
PGSC0003DMT400020360	Potato	cytosol	68.5	65.2
PGSC0003DMT400020349	Potato	cytosol	67.84	64.84
PGSC0003DMT400020353	Potato	cytosol, nucleus, plastid	62.67	62.94
PGSC0003DMT400020342	Potato	cytosol	61.89	62.03
PGSC0003DMT400020346	Potato	cytosol	28.96	59.64
PGSC0003DMT400068337	Potato	extracellular	16.08	56.81
PGSC0003DMT400010966	Potato	cytosol	51.65	56.71
PGSC0003DMT400010970	Potato	plasma membrane	47.91	52.79
PGSC0003DMT400020350	Potato	cytosol, nucleus, plasma membrane	42.4	44.1
PGSC0003DMT400036058	Potato	cytosol	36.45	43.16
PGSC0003DMT400005012	Potato	cytosol	15.64	41.04
PGSC0003DMT400046494	Potato	cytosol	11.89	39.42
PGSC0003DMT400012121	Potato	extracellular, golgi	22.58	37.61
PGSC0003DMT400048669	Potato	cytosol	8.59	36.97
PGSC0003DMT400005034	Potato	plastid	16.41	36.52
PGSC0003DMT400025440	Potato	cytosol, mitochondrion	18.72	36.4
PGSC0003DMT400012479	Potato	cytosol	25.33	34.95
PGSC0003DMT400093366	Potato	cytosol	27.86	34.94
PGSC0003DMT400047508	Potato	cytosol	15.31	34.84
PGSC0003DMT400034063	Potato	cytosol	30.95	34.78
PGSC0003DMT400005032	Potato	cytosol	22.36	34.7
PGSC0003DMT400005041	Potato	cytosol	23.13	34.65
PGSC0003DMT400060798	Potato	cytosol	30.73	34.32
PGSC0003DMT400005011	Potato	cytosol, plastid	22.14	33.95
PGSC0003DMT400047502	Potato	cytosol	35.35	33.75
PGSC0003DMT400062762	Potato	plastid	14.65	33.59
PGSC0003DMT400051415	Potato	cytosol	17.84	33.47
PGSC0003DMT400082507	Potato	cytosol	13.33	33.33
PGSC0003DMT400017538	Potato	nucleus	32.38	33.11
PGSC0003DMT400076082	Potato	cytosol	24.23	33.03
PGSC0003DMT400062180	Potato	cytosol	30.62	32.98
PGSC0003DMT400036070	Potato	cytosol, plastid	33.59	32.94
PGSC0003DMT400025439	Potato	cytosol	19.82	32.73
PGSC0003DMT400030031	Potato	cytosol	11.56	32.71
PGSC0003DMT400005732	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	10.02	32.62
PGSC0003DMT400056264	Potato	endoplasmic reticulum	31.83	32.58
PGSC0003DMT400050821	Potato	cytosol	31.72	32.58
PGSC0003DMT400050805	Potato	cytosol	31.72	32.54
PGSC0003DMT400012486	Potato	cytosol	31.17	32.38
PGSC0003DMT400005013	Potato	plastid	31.39	32.35
PGSC0003DMT400005052	Potato	plastid	26.32	32.25
PGSC0003DMT400056268	Potato	cytosol	21.81	32.25
PGSC0003DMT400062766	Potato	cytosol	19.05	32.16
PGSC0003DMT400005040	Potato	cytosol, nucleus, peroxisome	20.26	32.11
KRG88520	Soybean	plastid	12.22	31.99
PGSC0003DMT400005017	Potato	cytosol, plastid	31.06	31.94
PGSC0003DMT400002788	Potato	cytosol	29.74	31.73
PGSC0003DMT400025432	Potato	cytosol	23.79	31.67
PGSC0003DMT400062184	Potato	cytosol	30.18	31.57
PGSC0003DMT400078333	Potato	cytosol, vacuole	30.07	31.52
PGSC0003DMT400050509	Potato	cytosol	30.4	31.51
PGSC0003DMT400056267	Potato	cytosol	15.75	31.36
PGSC0003DMT400047510	Potato	nucleus	35.02	31.3
PGSC0003DMT400046497	Potato	cytosol	11.23	31.29
PGSC0003DMT400005006	Potato	vacuole	30.62	31.2
PGSC0003DMT400042194	Potato	cytosol	32.27	31.14
PGSC0003DMT400078334	Potato	cytosol, plastid	30.84	30.43
PGSC0003DMT400005046	Potato	cytosol, extracellular	7.27	30.28
PGSC0003DMT400019683	Potato	cytosol, mitochondrion	16.3	29.96
PGSC0003DMT400088449	Potato	cytosol	29.96	29.89
PGSC0003DMT400005733	Potato	cytosol	17.07	29.47
VIT_15s0045g00980.t01	Wine grape	cytosol	19.27	29.31
PGSC0003DMT400069012	Potato	cytosol	17.95	29.16
VIT_16s0022g01330.t01	Wine grape	cytosol	20.26	29.07
PGSC0003DMT400082452	Potato	cytosol	16.08	29.03
PGSC0003DMT400080647	Potato	cytosol	28.85	29.01
PGSC0003DMT400066996	Potato	cytosol	27.97	28.67
PGSC0003DMT400019329	Potato	cytosol	23.13	28.61
PGSC0003DMT400058642	Potato	cytosol	14.32	28.57
TraesCS2D01G510300.1	Wheat	cytosol	17.18	28.52
PGSC0003DMT400030040	Potato	cytosol	19.05	28.45
PGSC0003DMT400062272	Potato	cytosol	15.75	28.32
VIT_15s0046g02800.t01	Wine grape	cytosol	20.93	27.7
PGSC0003DMT400066993	Potato	cytosol, plasma membrane	27.64	27.52
KRG88521	Soybean	cytosol	25.99	27.38
PGSC0003DMT400030826	Potato	cytosol	14.21	27.33
Os11t0633500-01	Rice	cytosol	15.86	27.27
PGSC0003DMT400082505	Potato	cytosol	13.11	26.98
GSMUA_Achr7P20240_001	Banana	mitochondrion	20.7	26.9
TraesCS6A01G404000.1	Wheat	cytosol	16.19	26.87
TraesCS7A01G562500.1	Wheat	cytosol	16.41	26.85
PGSC0003DMT400031116	Potato	cytosol	23.02	26.83
KRH17117	Soybean	cytosol	25.88	26.8
PGSC0003DMT400030019	Potato	cytosol	24.89	26.78
PGSC0003DMT400059833	Potato	cytosol	12.89	26.77
PGSC0003DMT400030042	Potato	cytosol	25.33	26.74
KRH01534	Soybean	cytosol	24.56	26.67
GSMUA_AchrUn_...	Banana	cytosol	8.04	26.64
VIT_15s0045g01020.t01	Wine grape	cytosol	18.83	26.59
PGSC0003DMT400041023	Potato	cytosol	24.45	26.52
KRH45220	Soybean	cytosol, extracellular, plastid	26.1	26.51
PGSC0003DMT400019300	Potato	cytosol, plasma membrane, plastid	19.71	26.28
PGSC0003DMT400030011	Potato	cytosol	24.23	26.13
TraesCS6B01G447800.1	Wheat	cytosol	15.31	26.13
TraesCS6D01G387400.1	Wheat	cytosol	16.41	26.09
PGSC0003DMT400094032	Potato	cytosol	11.23	26.09
PGSC0003DMT400030034	Potato	cytosol	24.01	25.98
PGSC0003DMT400078332	Potato	cytosol	13.0	25.93
PGSC0003DMT400019678	Potato	cytosol, extracellular	9.03	25.87
TraesCS2B01G536900.1	Wheat	cytosol	15.75	25.86
VIT_15s0046g03660.t01	Wine grape	cytosol	23.9	25.8
KRH01598	Soybean	cytosol	25.11	25.79
PGSC0003DMT400058647	Potato	cytosol, nucleus	17.62	25.72
PGSC0003DMT400030030	Potato	nucleus	20.82	25.71
TraesCS2D01G510100.1	Wheat	cytosol	13.77	25.67
PGSC0003DMT400031142	Potato	cytosol	23.57	25.66
TraesCS6B01G447900.1	Wheat	cytosol	20.7	25.65
PGSC0003DMT400031132	Potato	cytosol	22.58	25.62
TraesCS2A01G477200.1	Wheat	cytosol	19.05	25.59
VIT_15s0046g02730.t01	Wine grape	cytosol	25.77	25.43
PGSC0003DMT400016707	Potato	cytosol	23.79	25.41
PGSC0003DMT400019327	Potato	cytosol, extracellular	13.44	25.36
TraesCS6A01G403900.1	Wheat	plasma membrane, vacuole	21.15	25.36
PGSC0003DMT400016712	Potato	cytosol	23.46	25.36
KRH01595	Soybean	cytosol	25.0	25.33
PGSC0003DMT400030044	Potato	mitochondrion	23.68	25.26
KRH23932	Soybean	cytosol	25.77	25.19
TraesCS7A01G561700.1	Wheat	cytosol	24.01	25.12
GSMUA_AchrUn_...	Banana	cytosol	20.7	25.07
TraesCS2D01G510000.1	Wheat	cytosol	21.26	25.06
TraesCS7B01G500800.1	Wheat	cytosol	19.82	24.97
GSMUA_Achr7P20230_001	Banana	cytosol	24.34	24.89
TraesCS6B01G448100.1	Wheat	cytosol	21.59	24.87
PGSC0003DMT400075885	Potato	cytosol, plastid	24.23	24.8
PGSC0003DMT400027529	Potato	cytosol	24.12	24.8
VIT_15s0021g00130.t01	Wine grape	cytosol, nucleus, plastid	8.48	24.76
GSMUA_Achr7P20220_001	Banana	cytosol	24.34	24.58
PGSC0003DMT400019304	Potato	cytosol	23.79	24.57
PGSC0003DMT400075439	Potato	cytosol	25.77	24.48
TraesCS7A01G562000.1	Wheat	cytosol	23.57	24.46
TraesCS2B01G151600.2	Wheat	cytosol	22.69	24.32
TraesCS1B01G336700.1	Wheat	cytosol	21.48	24.31
VIT_00s0448g00020.t01	Wine grape	cytosol	25.22	24.28
TraesCS6D01G387500.1	Wheat	cytosol, plastid	21.15	24.27
VIT_15s0046g02820.t01	Wine grape	cytosol	25.22	24.26
TraesCS7B01G423500.1	Wheat	cytosol	23.13	24.25
OQU82378	Sorghum	nucleus	22.36	24.22
TraesCS7B01G501200.1	Wheat	cytosol	14.65	24.18
PGSC0003DMT400050826	Potato	cytosol	24.12	24.12
TraesCS5D01G269100.1	Wheat	cytosol	18.28	24.09
TraesCS7B01G501000.1	Wheat	cytosol	23.13	24.03
TraesCS7B01G501900.1	Wheat	cytosol	23.02	24.0
PGSC0003DMT400019301	Potato	cytosol	22.36	23.97
VIT_15s0046g02750.t01	Wine grape	cytosol	24.67	23.93
VIT_15s0046g02810.t01	Wine grape	cytosol	24.67	23.91
TraesCS6B01G448300.2	Wheat	cytosol, peroxisome, plasma membrane	20.82	23.89
TraesCS7B01G500900.1	Wheat	cytosol	23.02	23.89
HORVU2Hr1G022620.8	Barley	cytosol	22.91	23.88
TraesCS7B01G501100.1	Wheat	cytosol	22.91	23.88
TraesCS7A01G561900.4	Wheat	cytosol	24.01	23.75
HORVU1Hr1G075170.1	Barley	cytosol	22.58	23.56
PGSC0003DMT400031120	Potato	cytosol	7.93	23.53
TraesCS7D01G548100.1	Wheat	cytosol	23.02	23.51
TraesCS1D01G324700.2	Wheat	cytosol	22.47	23.45
VIT_15s0045g00880.t01	Wine grape	cytosol	19.49	23.44
TraesCS7B01G500700.1	Wheat	cytosol	21.92	23.44
TraesCS1A01G323600.1	Wheat	cytosol	22.36	23.31
VIT_15s0045g00680.t01	Wine grape	cytosol	19.82	23.29
PGSC0003DMT400059836	Potato	cytosol	9.91	23.02
Os10t0183000-01	Rice	plasma membrane	22.47	22.82
TraesCS2A01G459100.1	Wheat	plastid	19.93	22.77
HORVU5Hr1G072540.26	Barley	cytosol	21.92	22.64
TraesCS7B01G449900.2	Wheat	cytosol	22.03	22.6
TraesCS5A01G261700.1	Wheat	cytosol	21.92	22.59
TraesCS2B01G507000.1	Wheat	cytosol	18.17	22.57
PGSC0003DMT400021403	Potato	cytosol	23.46	22.42
PGSC0003DMT400030022	Potato	cytosol	12.89	22.33
TraesCS2B01G507100.1	Wheat	cytosol	23.13	22.13
TraesCS6B01G448400.1	Wheat	cytosol	20.59	22.05
TraesCS5A01G261600.1	Wheat	cytosol	21.37	22.02
TraesCS2D01G481300.1	Wheat	cytosol	22.8	21.63
TraesCS5B01G259900.1	Wheat	cytosol	21.92	21.42
Os03t0709200-01	Rice	cytosol	22.47	21.27
VIT_15s0045g00920.t01	Wine grape	cytosol	12.11	21.15
Zm00001d045512_P001	Maize	cytosol, mitochondrion	19.27	21.01
TraesCS6B01G448000.1	Wheat	cytosol	5.84	19.56
VIT_15s0045g00810.t01	Wine grape	cytosol	9.03	19.25
VIT_15s0045g00640.t01	Wine grape	cytosol	10.13	19.05
TraesCS2A01G129300.1	Wheat	cytosol	5.07	18.4
TraesCS7B01G501300.1	Wheat	cytosol	5.4	17.75
PGSC0003DMT400027536	Potato	cytosol	11.23	16.35
VIT_15s0045g01010.t01	Wine grape	cytosol	3.19	15.03

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf
UniProt:M0ZT73	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	EnsemblPlantsGene:PGSC0003DMG400002920	PGSC:PGSC0003DMG400002920
EnsemblPlants:PGSC0003DMT400007570	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF17	InterPro:RX-like_CC	SUPFAM:SSF52058
SUPFAM:SSF52540	UniParc:UPI000296A36C	SEG:seg	:	:	:

Description

RGC1 [Source:PGSC_GENE;Acc:PGSC0003DMG400002920]

Coordinates

chr12:-:3002413..3006190

Molecular Weight (calculated)

104615.0 Da

IEP (calculated)

4.894

GRAVY (calculated)

-0.193

Length

908 amino acids

Sequence
(BLAST)

001: MSYAAITCLM RTIHQSMQLT GRDLQPFYEK LKSLRAILEK PWKATDDLEA LTNLEAEISE VAYSAGDMVD LKSRNVLFAQ KAKNKARAFW ELCCSLEQEV
101: ERIDSLMMQW LAIWNWYSKI KDLKARKFSL APSIPEHAVG KPENIMVGHE NEFEMMLNQV AGGERELEVV SIVGMGGIGK TTLATKLYRD PRIMSHFDIL
201: AKATVSQEYC VRNVLLALLA STSEEPDDQL ADQLQKRLKG KRYLVVIDDI WTKGAWDDIR QCFPDCNNRS RILLTTRNVE VAGYARSGKP PYHMRVMDFD
301: ESWSLLYEKV FAKDSFPSEF EQLGKQIALK CGGLPLAIIV IAGLLSKTGK TLDVWQSIAE NVSSVVSTDL EAQCMRVLAL SYHHLPSHLK PCFLYFAIFP
401: EDRLIFVNKL LDLWVAEGFL KVEEMENIEE VAEKCLTDLV DRSLISISHS IFDGKKARCG MHDVTRELCL REARNVNFVN VLRGTSDQIP CTQSMQTSRG
501: RISIHDKQKL VRYLNSEAHS IFMFGIYQFY EPELSFKRVR VLYLDSIKFQ TFPRVILSLI HLRYIALNFR LLIEGDHSAK IDIPPSILNL CYLETLRLNV
601: SDPYDKAALI LPLEILMLPQ LRHLHLTRNF LYDHGITEKS LVLKNLHCLI GLNPRYCTEF FFRRFPNLKE LQIRGFFVDF CSRKDLRDFH YLDQLEELEF
701: LLENLTSFDR KTVGSSLLLP PPCAFPQGLK KLAFTGEFFL PLKDLSIVGK LPKLESLKLE YDAFIGDEWE VAEEGFPRLK FLLLRCLHFR HWRASSDHFP
801: CLERLIIDAC WKLHSIPQDF ANITTLALID IKICAQAVGN SAKQIQQDIE DDYGRSIEVY IRDASYFDDD DDDDDDDEEE DFDDDDDQEE EDDDDDDFDV
901: DEQDNVIG

Best Arabidopsis Sequence Match ( AT1G50180.1 )
(BLAST)

001: MAEAIVSVTV QKLGQLLLEE PLFLFGIGDQ VKQLQDELKR LNCFLKDADE KQHESERVRN WVAGIREASY DAEDILEAFF LKAESRKQKG MKRVLRRLAC
101: ILNEAVSLHS VGSEIREITS RLSKIAASML DFGIKESMGR EGLSLSDSLR EQRQSFPYVV EHNLVGLEQS LEKLVNDLVS GGEKLRVTSI CGMGGLGKTT
201: LAKQIFHHHK VRRHFDRFAW VYVSQDCRRR HVWQDIFLNL SYKDENQRIL SLRDEQLGEE LHRFLKRNKC LIVLDDIWGK DAWDCLKHVF PHETGSEIIL
301: TTRNKEVALY ADPRGVLHEP QLLTCEESWE LLEKISLSGR ENIEPMLVKK MEEIGKQIVV RCGGLPLAIT VLGGLLATKS TWNEWQRVCE NIKSYVSNGG
401: SSNGSKNMLV ADVLCLSYEY LPPHVKQCFL YFAHYPEDYE VHVGTLVSYC IAEGMVMPVK HTEAGTTVED VGQDYLEELV KRSMVMVGRR DIVTSEVMTC
501: RMHDLMREVC LQKAKQESFV QVIDSRDQDE AEAFISLSTN TSRRISVQLH GGAEEHHIKS LSQVSFRKMK LLRVLDLEGA QIEGGKLPDD VGDLIHLRNL
601: SVRLTNVKEL TSSIGNLKLM ITLDLFVKGQ LYIPNQLWDF PVGKCNPRDL LAMTSLRRLS INLSSQNTDF VVVSSLSKVL KRLRGLTINV PCEPMLPPVD
701: VTQLVSAFTN LCELELFLKL EKLPGEQSFS SDLGALRLWQ CGLVDDPFMV LEKLPNLKIL QLFEGSFVGS KLCCSKNLEN LEEWTVEDGA MMRLVTVELK
801: CCNKLKSVPE GTRFLKNLQE VEIGNRTKAF KDKLISGGED FYKVQHVPCV VFENCEL

Arabidopsis Description

Putative disease resistance protein At1g50180 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX38]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.