Factsheet for PGSC0003DMT400062762

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400046494	Potato	cytosol	52.02	75.18
PGSC0003DMT400048669	Potato	cytosol	39.9	74.88
PGSC0003DMT400005046	Potato	cytosol, extracellular	40.66	73.85
PGSC0003DMT400005732	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	49.24	69.89
PGSC0003DMT400005034	Potato	plastid	69.19	67.16
PGSC0003DMT400019678	Potato	cytosol, extracellular	50.51	63.09
PGSC0003DMT400062766	Potato	cytosol	80.05	58.92
PGSC0003DMT400005011	Potato	cytosol, plastid	79.04	52.87
PGSC0003DMT400005012	Potato	cytosol	42.17	48.27
PGSC0003DMT400010987	Potato	cytosol	18.18	37.5
PGSC0003DMT400005017	Potato	cytosol, plastid	78.79	35.33
PGSC0003DMT400068337	Potato	extracellular	22.22	34.24
PGSC0003DMT400005006	Potato	vacuole	76.77	34.12
PGSC0003DMT400005013	Potato	plastid	75.51	33.94
PGSC0003DMT400005032	Potato	cytosol	46.21	31.28
PGSC0003DMT400005052	Potato	plastid	58.08	31.04
PGSC0003DMT400036104	Potato	extracellular, plasma membrane	25.25	28.82
PGSC0003DMT400062366	Potato	cytosol	26.77	28.42
PGSC0003DMT400078333	Potato	cytosol, vacuole	61.62	28.18
PGSC0003DMT400002788	Potato	cytosol	59.6	27.73
PGSC0003DMT400078334	Potato	cytosol, plastid	64.39	27.72
PGSC0003DMT400025439	Potato	cytosol	35.86	25.82
KRG88520	Soybean	plastid	20.96	23.92
TraesCS7B01G501300.1	Wheat	cytosol	16.41	23.55
PGSC0003DMT400059833	Potato	cytosol	25.76	23.34
PGSC0003DMT400082507	Potato	cytosol	21.21	23.14
VIT_15s0021g00130.t01	Wine grape	cytosol, nucleus, plastid	17.93	22.83
TraesCS2A01G129300.1	Wheat	cytosol	14.39	22.8
PGSC0003DMT400058647	Potato	cytosol, nucleus	35.35	22.51
TraesCS6B01G448000.1	Wheat	cytosol	14.9	21.77
Solyc10g051050.1.1	Tomato	cytosol	30.05	21.52
TraesCS2D01G510100.1	Wheat	cytosol	26.01	21.15
PGSC0003DMT400062272	Potato	cytosol	26.52	20.79
PGSC0003DMT400025432	Potato	cytosol	35.35	20.53
PGSC0003DMT400082452	Potato	cytosol	25.76	20.28
PGSC0003DMT400005041	Potato	cytosol	30.81	20.13
PGSC0003DMT400076082	Potato	cytosol	33.59	19.97
PGSC0003DMT400019327	Potato	cytosol, extracellular	24.24	19.96
PGSC0003DMT400025440	Potato	cytosol, mitochondrion	22.98	19.49
PGSC0003DMT400056268	Potato	cytosol	29.55	19.06
PGSC0003DMT400082505	Potato	cytosol	21.21	19.05
VIT_15s0045g00980.t01	Wine grape	cytosol	28.54	18.93
VIT_15s0045g00920.t01	Wine grape	cytosol	24.49	18.65
Os11t0633500-01	Rice	cytosol	24.49	18.37
TraesCS2B01G536900.1	Wheat	cytosol	25.51	18.26
TraesCS6B01G447800.1	Wheat	cytosol	24.49	18.23
VIT_15s0045g01010.t01	Wine grape	cytosol	8.84	18.13
TraesCS7A01G562500.1	Wheat	cytosol	25.25	18.02
PGSC0003DMT400060798	Potato	cytosol	36.36	17.71
PGSC0003DMT400062180	Potato	cytosol	35.86	16.84
PGSC0003DMT400010970	Potato	plasma membrane	34.6	16.63
PGSC0003DMT400030031	Potato	cytosol	13.38	16.51
PGSC0003DMT400017538	Potato	nucleus	36.62	16.33
PGSC0003DMT400036058	Potato	cytosol	31.57	16.3
PGSC0003DMT400030022	Potato	cytosol	21.46	16.22
PGSC0003DMT400034063	Potato	cytosol	32.83	16.09
PGSC0003DMT400020342	Potato	cytosol	36.62	16.0
PGSC0003DMT400020353	Potato	cytosol, nucleus, plastid	36.36	15.93
PGSC0003DMT400012486	Potato	cytosol	34.34	15.56
PGSC0003DMT400036070	Potato	cytosol, plastid	35.61	15.23
PGSC0003DMT400042194	Potato	cytosol	35.86	15.09
VIT_15s0045g00680.t01	Wine grape	cytosol	29.29	15.01
PGSC0003DMT400050509	Potato	cytosol	32.83	14.84
VIT_15s0045g00880.t01	Wine grape	cytosol	28.28	14.83
PGSC0003DMT400005040	Potato	cytosol, nucleus, peroxisome	21.46	14.83
PGSC0003DMT400007570	Potato	cytosol	33.59	14.65
TraesCS2A01G477200.1	Wheat	cytosol	25.0	14.64
PGSC0003DMT400020349	Potato	cytosol	35.1	14.63
TraesCS2D01G510300.1	Wheat	cytosol	20.2	14.63
VIT_15s0046g02800.t01	Wine grape	cytosol	25.25	14.58
PGSC0003DMT400020360	Potato	cytosol	34.85	14.47
PGSC0003DMT400088449	Potato	cytosol	33.08	14.4
TraesCS5D01G269100.1	Wheat	cytosol	24.75	14.22
TraesCS6A01G403900.1	Wheat	plasma membrane, vacuole	26.77	14.0
PGSC0003DMT400047502	Potato	cytosol	33.59	13.99
PGSC0003DMT400056264	Potato	endoplasmic reticulum	31.31	13.98
TraesCS6B01G448300.2	Wheat	cytosol, peroxisome, plasma membrane	27.78	13.91
PGSC0003DMT400030030	Potato	nucleus	25.76	13.88
KRH01534	Soybean	cytosol	29.29	13.88
TraesCS2D01G510000.1	Wheat	cytosol	26.77	13.77
PGSC0003DMT400012121	Potato	extracellular, golgi	18.94	13.76
TraesCS7B01G500800.1	Wheat	cytosol	25.0	13.73
PGSC0003DMT400030019	Potato	cytosol	28.54	13.39
TraesCS6B01G448100.1	Wheat	cytosol	26.52	13.32
TraesCS6D01G387500.1	Wheat	cytosol, plastid	26.52	13.27
KRG88521	Soybean	cytosol	28.79	13.23
PGSC0003DMT400010966	Potato	cytosol	27.53	13.18
GSMUA_AchrUn_...	Banana	cytosol	9.09	13.14
PGSC0003DMT400062184	Potato	cytosol	28.79	13.13
KRH17117	Soybean	cytosol	29.04	13.11
PGSC0003DMT400050821	Potato	cytosol	29.04	13.01
PGSC0003DMT400058642	Potato	cytosol	14.9	12.97
PGSC0003DMT400047510	Potato	nucleus	33.08	12.89
PGSC0003DMT400030034	Potato	cytosol	27.27	12.87
PGSC0003DMT400080647	Potato	cytosol	29.29	12.85
TraesCS2B01G151600.2	Wheat	cytosol	27.27	12.75
PGSC0003DMT400027536	Potato	cytosol	19.95	12.66
PGSC0003DMT400041023	Potato	cytosol	26.52	12.54
PGSC0003DMT400016712	Potato	cytosol	26.52	12.5
PGSC0003DMT400016707	Potato	cytosol	26.77	12.47
TraesCS1B01G336700.1	Wheat	cytosol	25.25	12.47
VIT_15s0045g00810.t01	Wine grape	cytosol	13.38	12.44
KRH45220	Soybean	cytosol, extracellular, plastid	28.03	12.42
TraesCS6B01G447900.1	Wheat	cytosol	22.98	12.41
PGSC0003DMT400066996	Potato	cytosol	27.53	12.3
TraesCS6B01G448400.1	Wheat	cytosol	26.26	12.26
PGSC0003DMT400031142	Potato	cytosol	25.76	12.23
PGSC0003DMT400030042	Potato	cytosol	26.52	12.21
PGSC0003DMT400019301	Potato	cytosol	26.01	12.16
PGSC0003DMT400031132	Potato	cytosol	24.49	12.12
TraesCS7B01G423500.1	Wheat	cytosol	26.52	12.12
PGSC0003DMT400030011	Potato	cytosol	25.76	12.11
PGSC0003DMT400050805	Potato	cytosol	27.02	12.09
KRH23932	Soybean	cytosol	28.28	12.06
HORVU2Hr1G022620.8	Barley	cytosol	26.52	12.06
PGSC0003DMT400031116	Potato	cytosol	23.48	11.94
OQU82378	Sorghum	nucleus	25.25	11.93
TraesCS7B01G500700.1	Wheat	cytosol	25.51	11.9
PGSC0003DMT400021403	Potato	cytosol	28.54	11.89
PGSC0003DMT400050826	Potato	cytosol	27.27	11.89
PGSC0003DMT400027529	Potato	cytosol	26.52	11.89
PGSC0003DMT400093366	Potato	cytosol	21.72	11.88
KRH01598	Soybean	cytosol	26.52	11.88
Os10t0183000-01	Rice	plasma membrane	26.77	11.86
PGSC0003DMT400066993	Potato	cytosol, plasma membrane	27.27	11.84
TraesCS1D01G324700.2	Wheat	cytosol	26.01	11.84
TraesCS7B01G501900.1	Wheat	cytosol	25.76	11.71
TraesCS5A01G261700.1	Wheat	cytosol	26.01	11.69
TraesCS7A01G562000.1	Wheat	cytosol	25.76	11.66
KRH01595	Soybean	cytosol	26.26	11.61
HORVU5Hr1G072540.26	Barley	cytosol	25.76	11.6
TraesCS1A01G323600.1	Wheat	cytosol	25.51	11.6
TraesCS7B01G500900.1	Wheat	cytosol	25.51	11.54
VIT_15s0046g03660.t01	Wine grape	cytosol	24.49	11.53
TraesCS7B01G449900.2	Wheat	cytosol	25.76	11.53
PGSC0003DMT400030044	Potato	mitochondrion	24.75	11.52
HORVU1Hr1G075170.1	Barley	cytosol	25.25	11.49
PGSC0003DMT400019304	Potato	cytosol	25.51	11.49
TraesCS7B01G501100.1	Wheat	cytosol	25.25	11.48
TraesCS7A01G561700.1	Wheat	cytosol	25.0	11.41
VIT_15s0045g00640.t01	Wine grape	cytosol	13.89	11.39
TraesCS7D01G548100.1	Wheat	cytosol	25.51	11.36
TraesCS7B01G501000.1	Wheat	cytosol	25.0	11.33
VIT_15s0046g02750.t01	Wine grape	cytosol	26.77	11.32
GSMUA_Achr7P20220_001	Banana	cytosol	25.51	11.23
TraesCS7A01G561900.4	Wheat	cytosol	26.01	11.22
PGSC0003DMT400075885	Potato	cytosol, plastid	25.0	11.16
PGSC0003DMT400019300	Potato	cytosol, plasma membrane, plastid	19.19	11.16
GSMUA_Achr7P20230_001	Banana	cytosol	25.0	11.15
VIT_00s0448g00020.t01	Wine grape	cytosol	26.52	11.13
TraesCS5A01G261600.1	Wheat	cytosol	24.75	11.12
VIT_15s0046g02730.t01	Wine grape	cytosol	25.76	11.09
PGSC0003DMT400030826	Potato	cytosol	13.13	11.02
PGSC0003DMT400056267	Potato	cytosol	12.63	10.96
Os03t0709200-01	Rice	cytosol	26.52	10.95
PGSC0003DMT400012479	Potato	cytosol	18.18	10.94
GSMUA_AchrUn_...	Banana	cytosol	20.71	10.93
VIT_15s0046g02820.t01	Wine grape	cytosol	26.01	10.91
PGSC0003DMT400075439	Potato	cytosol	26.26	10.88
PGSC0003DMT400019329	Potato	cytosol	19.95	10.76
TraesCS2A01G459100.1	Wheat	plastid	21.46	10.69
VIT_15s0046g02810.t01	Wine grape	cytosol	25.25	10.67
TraesCS5B01G259900.1	Wheat	cytosol	25.0	10.66
VIT_16s0022g01330.t01	Wine grape	cytosol	15.91	9.95
TraesCS2B01G507100.1	Wheat	cytosol	22.98	9.59
PGSC0003DMT400030040	Potato	cytosol	14.65	9.54
VIT_15s0045g01020.t01	Wine grape	cytosol	15.15	9.33
TraesCS2D01G481300.1	Wheat	cytosol	22.22	9.2
Zm00001d045512_P001	Maize	cytosol, mitochondrion	18.94	9.0
TraesCS6A01G404000.1	Wheat	cytosol	12.12	8.78
GSMUA_Achr7P20240_001	Banana	mitochondrion	15.4	8.73
TraesCS6D01G387400.1	Wheat	cytosol	12.12	8.41
PGSC0003DMT400047508	Potato	cytosol	7.83	7.77
PGSC0003DMT400069012	Potato	cytosol	9.34	6.62
PGSC0003DMT400020346	Potato	cytosol	7.32	6.58
TraesCS2B01G507000.1	Wheat	cytosol	12.12	6.57
PGSC0003DMT400051415	Potato	cytosol	7.58	6.2
PGSC0003DMT400046497	Potato	cytosol	4.55	5.52
PGSC0003DMT400019683	Potato	cytosol, mitochondrion	6.31	5.06
TraesCS7B01G501200.1	Wheat	cytosol	5.3	3.82
PGSC0003DMT400005733	Potato	cytosol	5.05	3.8
PGSC0003DMT400020350	Potato	cytosol, nucleus, plasma membrane	7.83	3.55
PGSC0003DMT400031120	Potato	cytosol	1.26	1.63
PGSC0003DMT400094032	Potato	cytosol	1.52	1.53
PGSC0003DMT400059836	Potato	cytosol	1.01	1.02
PGSC0003DMT400078332	Potato	cytosol	1.01	0.88

Protein Annotations

EnsemblPlants:PGSC0003DMT400062762	EnsemblPlantsGene:PGSC0003DMG400024429	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43886
PANTHER:PTHR43886:SF17	PFAM:PF00931	PGSC:PGSC0003DMG400024429	PRINTS:PR00364	SEG:seg	SUPFAM:SSF52540
UniParc:UPI0002962735	UniProt:M1C9I7	MapMan:35.1	:	:	:

Description

NBS-coding resistance gene analog [Source:PGSC_GENE;Acc:PGSC0003DMG400024429]

Coordinates

chr00:-:28002456..28006250

Molecular Weight (calculated)

45560.5 Da

IEP (calculated)

5.045

GRAVY (calculated)

-0.329

Length

396 amino acids

Sequence
(BLAST)

001: MAYAALSSLM YTLDQPMKPN QSFVCLSSTQ KHVRSLYQNL SVLQVFLDNA TKETKDIETL KFIEKRIRDV IYEAEDKVDS SLRNIILADC TEKREGAAKF
101: FNEELLKVEK DVDSLNKEVM LIEFNKHGSK SAELASISSS LEKSTIEENT IVGMEDDFNI ILDRLTSQTE ELTVIPIFGM GGIGKTTLAR KVYDNSCIRS
201: RFDKQEWVTI SEKFNERQML LELVSSITGS KQETSSDELM EIVYRGLKRR RFLIVIDDIW STEAWDQMQR IFPNDDNKSR ILLTTRLKYV ADYVSCPYFP
301: PHSKSFLSLE DSWNLFTEKL FKKDHCPPLL EEIGKHIVQQ CRGFPLSVVV VAGLVGKMDP TYDNWKNVEE NLNSFFGTVS ERCQSILSLS YNYLPQ

Best Arabidopsis Sequence Match ( AT3G46530.1 )
(BLAST)

001: MVDAITEFVV GKIGNYLIEE ASMFMAVKED LEELKTELTC IHGYLKDVEA REREDEVSKE WSKLVLDFAY DVEDVLDTYH LKLEERSQRR GLRRLTNKIG
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC

Arabidopsis Description

RPP13Disease resistance protein RPP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M667]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.