Factsheet for PGSC0003DMT400025440

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058642	Potato	cytosol	63.6	65.27
PGSC0003DMT400025439	Potato	cytosol	74.09	62.91
PGSC0003DMT400051415	Potato	cytosol	64.67	62.4
PGSC0003DMT400005012	Potato	cytosol	32.33	43.64
PGSC0003DMT400058647	Potato	cytosol, nucleus	57.6	43.25
PGSC0003DMT400062366	Potato	cytosol	29.98	37.53
PGSC0003DMT400025432	Potato	cytosol	50.54	34.6
PGSC0003DMT400048669	Potato	cytosol	15.42	34.12
PGSC0003DMT400036104	Potato	extracellular, plasma membrane	24.84	33.43
PGSC0003DMT400046494	Potato	cytosol	19.49	33.21
PGSC0003DMT400056267	Potato	cytosol	31.91	32.68
PGSC0003DMT400082507	Potato	cytosol	25.05	32.23
PGSC0003DMT400030031	Potato	cytosol	22.06	32.09
PGSC0003DMT400010987	Potato	cytosol	13.06	31.77
PGSC0003DMT400056268	Potato	cytosol	40.69	30.94
PGSC0003DMT400005011	Potato	cytosol, plastid	38.76	30.57
PGSC0003DMT400046497	Potato	cytosol	20.56	29.45
PGSC0003DMT400005032	Potato	cytosol	36.4	29.06
PGSC0003DMT400047508	Potato	cytosol	24.41	28.57
PGSC0003DMT400005034	Potato	plastid	24.2	27.7
PGSC0003DMT400005041	Potato	cytosol	35.76	27.56
PGSC0003DMT400012121	Potato	extracellular, golgi	32.12	27.52
GSMUA_AchrUn_...	Banana	cytosol	15.63	26.64
PGSC0003DMT400005040	Potato	cytosol, nucleus, peroxisome	31.69	25.83
PGSC0003DMT400020346	Potato	cytosol	23.77	25.17
PGSC0003DMT400082505	Potato	cytosol	23.55	24.94
KRG88520	Soybean	plastid	18.42	24.78
PGSC0003DMT400062272	Potato	cytosol	26.34	24.36
VIT_15s0045g00980.t01	Wine grape	cytosol	31.05	24.29
PGSC0003DMT400082452	Potato	cytosol	26.12	24.25
VIT_16s0022g01330.t01	Wine grape	cytosol	32.76	24.17
TraesCS2D01G510300.1	Wheat	cytosol	27.19	23.22
PGSC0003DMT400062762	Potato	plastid	19.49	22.98
PGSC0003DMT400019327	Potato	cytosol, extracellular	23.55	22.87
PGSC0003DMT400002788	Potato	cytosol	41.54	22.8
PGSC0003DMT400012479	Potato	cytosol	32.12	22.8
VIT_15s0046g02800.t01	Wine grape	cytosol	33.4	22.74
PGSC0003DMT400005017	Potato	cytosol, plastid	42.83	22.65
PGSC0003DMT400036070	Potato	cytosol, plastid	44.75	22.57
PGSC0003DMT400005013	Potato	plastid	42.18	22.36
PGSC0003DMT400050509	Potato	cytosol	41.76	22.26
PGSC0003DMT400059833	Potato	cytosol	20.77	22.2
Os11t0633500-01	Rice	cytosol	25.05	22.16
PGSC0003DMT400019683	Potato	cytosol, mitochondrion	22.7	21.46
PGSC0003DMT400034063	Potato	cytosol	37.05	21.41
TraesCS7A01G562500.1	Wheat	cytosol	25.27	21.26
PGSC0003DMT400078333	Potato	cytosol, vacuole	39.4	21.25
TraesCS6B01G447800.1	Wheat	cytosol	24.2	21.24
PGSC0003DMT400005006	Potato	vacuole	40.47	21.21
PGSC0003DMT400030040	Potato	cytosol	27.19	20.89
PGSC0003DMT400005733	Potato	cytosol	23.34	20.72
PGSC0003DMT400017538	Potato	nucleus	39.4	20.72
PGSC0003DMT400019329	Potato	cytosol	32.55	20.71
VIT_15s0045g01020.t01	Wine grape	cytosol	28.27	20.53
PGSC0003DMT400030030	Potato	nucleus	32.12	20.41
PGSC0003DMT400062184	Potato	cytosol	37.69	20.28
PGSC0003DMT400010966	Potato	cytosol	35.76	20.19
PGSC0003DMT400060798	Potato	cytosol	35.12	20.17
PGSC0003DMT400010970	Potato	plasma membrane	35.55	20.15
PGSC0003DMT400030022	Potato	cytosol	22.48	20.04
PGSC0003DMT400093366	Potato	cytosol	31.05	20.03
PGSC0003DMT400078334	Potato	cytosol, plastid	39.4	20.0
PGSC0003DMT400088449	Potato	cytosol	38.97	20.0
TraesCS2A01G477200.1	Wheat	cytosol	28.91	19.97
TraesCS6D01G387400.1	Wheat	cytosol	24.41	19.96
PGSC0003DMT400062180	Potato	cytosol	35.97	19.93
TraesCS6A01G404000.1	Wheat	cytosol	23.34	19.93
TraesCS2D01G510100.1	Wheat	cytosol	20.77	19.92
TraesCS2B01G536900.1	Wheat	cytosol	23.55	19.89
PGSC0003DMT400056264	Potato	endoplasmic reticulum	37.69	19.84
PGSC0003DMT400020353	Potato	cytosol, nucleus, plastid	38.12	19.69
PGSC0003DMT400012486	Potato	cytosol	36.83	19.68
PGSC0003DMT400069012	Potato	cytosol	23.55	19.68
PGSC0003DMT400005052	Potato	plastid	30.84	19.43
PGSC0003DMT400031116	Potato	cytosol	32.12	19.26
PGSC0003DMT400042194	Potato	cytosol	38.12	18.92
PGSC0003DMT400066996	Potato	cytosol	35.55	18.74
PGSC0003DMT400007570	Potato	cytosol	36.4	18.72
PGSC0003DMT400020349	Potato	cytosol	37.9	18.63
GSMUA_Achr7P20240_001	Banana	mitochondrion	27.84	18.6
PGSC0003DMT400020342	Potato	cytosol	35.97	18.54
PGSC0003DMT400019300	Potato	cytosol, plasma membrane, plastid	26.98	18.5
PGSC0003DMT400036058	Potato	cytosol	30.19	18.38
PGSC0003DMT400080647	Potato	cytosol	35.55	18.38
PGSC0003DMT400020360	Potato	cytosol	37.47	18.34
TraesCS7B01G500800.1	Wheat	cytosol	28.27	18.31
TraesCS5D01G269100.1	Wheat	cytosol	26.98	18.29
TraesCS6B01G447900.1	Wheat	cytosol	28.69	18.28
PGSC0003DMT400016712	Potato	cytosol	32.76	18.21
KRG88521	Soybean	cytosol	33.62	18.21
PGSC0003DMT400050821	Potato	cytosol	34.05	17.99
PGSC0003DMT400050805	Potato	cytosol	34.05	17.97
KRH17117	Soybean	cytosol	33.62	17.9
PGSC0003DMT400030019	Potato	cytosol	32.33	17.89
PGSC0003DMT400066993	Potato	cytosol, plasma membrane	34.9	17.87
PGSC0003DMT400030034	Potato	cytosol	31.91	17.76
PGSC0003DMT400031132	Potato	cytosol	30.41	17.75
PGSC0003DMT400030011	Potato	cytosol	31.91	17.7
PGSC0003DMT400047502	Potato	cytosol	35.97	17.67
KRH01598	Soybean	cytosol	33.4	17.65
TraesCS6B01G448100.1	Wheat	cytosol	29.76	17.64
TraesCS6A01G403900.1	Wheat	plasma membrane, vacuole	28.48	17.57
KRH45220	Soybean	cytosol, extracellular, plastid	33.4	17.45
PGSC0003DMT400041023	Potato	cytosol	31.26	17.44
PGSC0003DMT400078332	Potato	cytosol	16.92	17.36
PGSC0003DMT400030042	Potato	cytosol	31.91	17.33
TraesCS6D01G387500.1	Wheat	cytosol, plastid	29.34	17.32
PGSC0003DMT400016707	Potato	cytosol	31.48	17.29
PGSC0003DMT400031142	Potato	cytosol	30.84	17.27
PGSC0003DMT400019304	Potato	cytosol	32.33	17.18
PGSC0003DMT400062766	Potato	cytosol	19.7	17.1
TraesCS2D01G510000.1	Wheat	cytosol	28.05	17.01
PGSC0003DMT400027529	Potato	cytosol	32.12	16.99
KRH01534	Soybean	cytosol	30.19	16.87
VIT_15s0046g02730.t01	Wine grape	cytosol	33.19	16.85
VIT_15s0046g02750.t01	Wine grape	cytosol	33.62	16.77
PGSC0003DMT400030044	Potato	mitochondrion	30.41	16.69
KRH23932	Soybean	cytosol	33.19	16.68
VIT_15s0046g02820.t01	Wine grape	cytosol	33.62	16.63
TraesCS6B01G448300.2	Wheat	cytosol, peroxisome, plasma membrane	28.05	16.56
TraesCS7B01G501200.1	Wheat	cytosol	19.49	16.55
VIT_00s0448g00020.t01	Wine grape	cytosol	33.4	16.54
PGSC0003DMT400047510	Potato	nucleus	35.97	16.54
PGSC0003DMT400050826	Potato	cytosol	32.12	16.52
KRH01595	Soybean	cytosol	31.48	16.41
PGSC0003DMT400075885	Potato	cytosol, plastid	31.05	16.35
PGSC0003DMT400030826	Potato	cytosol	16.49	16.31
VIT_15s0046g03660.t01	Wine grape	cytosol	29.34	16.29
VIT_15s0046g02810.t01	Wine grape	cytosol	32.55	16.22
TraesCS2B01G507000.1	Wheat	cytosol	25.27	16.14
PGSC0003DMT400005732	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	9.64	16.13
OQU82378	Sorghum	nucleus	28.91	16.11
VIT_15s0021g00130.t01	Wine grape	cytosol, nucleus, plastid	10.71	16.08
TraesCS2B01G151600.2	Wheat	cytosol	29.12	16.06
TraesCS7B01G500700.1	Wheat	cytosol	29.12	16.02
TraesCS1B01G336700.1	Wheat	cytosol	27.19	15.84
TraesCS7A01G562000.1	Wheat	cytosol	29.55	15.77
TraesCS7B01G501100.1	Wheat	cytosol	29.34	15.73
GSMUA_Achr7P20230_001	Banana	cytosol	29.76	15.65
TraesCS7D01G548100.1	Wheat	cytosol	29.55	15.52
PGSC0003DMT400021403	Potato	cytosol	31.48	15.47
PGSC0003DMT400076082	Potato	cytosol	22.06	15.47
GSMUA_Achr7P20220_001	Banana	cytosol	29.76	15.46
TraesCS7B01G501000.1	Wheat	cytosol	28.91	15.45
TraesCS7A01G561700.1	Wheat	cytosol	28.69	15.44
TraesCS7B01G500900.1	Wheat	cytosol	28.91	15.43
TraesCS7A01G561900.4	Wheat	cytosol	29.98	15.25
TraesCS7B01G423500.1	Wheat	cytosol	28.27	15.24
TraesCS6B01G448400.1	Wheat	cytosol	27.62	15.21
PGSC0003DMT400068337	Potato	extracellular	8.35	15.18
HORVU2Hr1G022620.8	Barley	cytosol	28.27	15.15
TraesCS7B01G501900.1	Wheat	cytosol	28.27	15.15
PGSC0003DMT400075439	Potato	cytosol	30.62	14.96
HORVU1Hr1G075170.1	Barley	cytosol	27.84	14.94
HORVU5Hr1G072540.26	Barley	cytosol	28.05	14.9
VIT_15s0045g00680.t01	Wine grape	cytosol	24.63	14.88
Os10t0183000-01	Rice	plasma membrane	28.48	14.88
PGSC0003DMT400019301	Potato	cytosol	26.98	14.88
TraesCS1D01G324700.2	Wheat	cytosol	27.62	14.83
TraesCS1A01G323600.1	Wheat	cytosol	27.62	14.81
TraesCS7B01G449900.2	Wheat	cytosol	28.05	14.8
GSMUA_AchrUn_...	Banana	cytosol	23.77	14.8
Zm00001d045512_P001	Maize	cytosol, mitochondrion	26.34	14.77
TraesCS5A01G261700.1	Wheat	cytosol	27.41	14.53
TraesCS5A01G261600.1	Wheat	cytosol	27.19	14.42
PGSC0003DMT400027536	Potato	cytosol	19.06	14.26
TraesCS2A01G459100.1	Wheat	plastid	24.2	14.21
Os03t0709200-01	Rice	cytosol	29.12	14.18
TraesCS2D01G481300.1	Wheat	cytosol	28.48	13.9
TraesCS5B01G259900.1	Wheat	cytosol	27.41	13.78
TraesCS2B01G507100.1	Wheat	cytosol	27.41	13.49
VIT_15s0045g00880.t01	Wine grape	cytosol	21.63	13.38
PGSC0003DMT400094032	Potato	cytosol	11.13	13.3
PGSC0003DMT400020350	Potato	cytosol, nucleus, plasma membrane	23.98	12.83
PGSC0003DMT400059836	Potato	cytosol	9.85	11.76
PGSC0003DMT400019678	Potato	cytosol, extracellular	7.71	11.36
VIT_15s0045g00920.t01	Wine grape	cytosol	12.42	11.15
PGSC0003DMT400005046	Potato	cytosol, extracellular	4.71	10.09
TraesCS6B01G448000.1	Wheat	cytosol	5.35	9.23
TraesCS7B01G501300.1	Wheat	cytosol	4.71	7.97
TraesCS2A01G129300.1	Wheat	cytosol	4.07	7.6
PGSC0003DMT400031120	Potato	cytosol	4.5	6.86
VIT_15s0045g00640.t01	Wine grape	cytosol	5.14	4.97
VIT_15s0045g00810.t01	Wine grape	cytosol	3.43	3.76
VIT_15s0045g01010.t01	Wine grape	cytosol	0.64	1.55

Protein Annotations

EnsemblPlants:PGSC0003DMT400025440	EnsemblPlantsGene:PGSC0003DMG401009819	Gene3D:1.10.8.430	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0043531	InterPro:NB-ARC
InterPro:P-loop_NTPase	PANTHER:PTHR43886	PANTHER:PTHR43886:SF17	PFAM:PF00931	PGSC:PGSC0003DMG401009819	PRINTS:PR00364
SUPFAM:SSF52540	UniParc:UPI0002954D67	UniProt:M1ALF6	MapMan:35.1	:	:

Description

Resistance protein PSH-RGH6 [Source:PGSC_GENE;Acc:PGSC0003DMG401009819]

Coordinates

chr00:+:32065300..32066703

Molecular Weight (calculated)

53965.4 Da

IEP (calculated)

8.419

GRAVY (calculated)

-0.187

Length

467 amino acids

Sequence
(BLAST)

001: MGGIGKTTLA RRVYDDSLIA YHFYVRAWTN VSQEFDTREI FLGILRSIGV VNDEVERSST TEQLAERVYR SLKGRKYLIV LDDMWSIEAW QHVRRSFPDD
101: HNGSRIVLTT RLVDVASCAC SGNSLHQMRF LSMEESWTLL RDKVFGNGGY PPELEKIGRY IGHQCQGLPL AVVAIGGLLS KMSKETSSWE NVAEKVESLM
201: TSDTMDCLNI LSLSYNHLPQ YLKTCFLYMG VFAETREIPV WKLIKLWIAE GFVKKVNHKN LEDVAEENLR ELVDRSLVLV GKHTSLGKIK TCKMHDLVRD
301: MCLREAQYEN FIHFKTRYDY DDLLENNSCL RRVADFHKYT DSRLSKLTPL TRSVFFKYPS FDCCLSQSSF RLLRILDVCF TTSLDSSQSI SELVHLRYLA
401: CPFFNGLVQS LCKLRNIQNL VIHNLHPFGL LMGPQSLPWE VVNMPRLRHI HTKKFKSFHT PTYIPNC

Best Arabidopsis Sequence Match ( AT1G50180.1 )
(BLAST)

001: MAEAIVSVTV QKLGQLLLEE PLFLFGIGDQ VKQLQDELKR LNCFLKDADE KQHESERVRN WVAGIREASY DAEDILEAFF LKAESRKQKG MKRVLRRLAC
101: ILNEAVSLHS VGSEIREITS RLSKIAASML DFGIKESMGR EGLSLSDSLR EQRQSFPYVV EHNLVGLEQS LEKLVNDLVS GGEKLRVTSI CGMGGLGKTT
201: LAKQIFHHHK VRRHFDRFAW VYVSQDCRRR HVWQDIFLNL SYKDENQRIL SLRDEQLGEE LHRFLKRNKC LIVLDDIWGK DAWDCLKHVF PHETGSEIIL
301: TTRNKEVALY ADPRGVLHEP QLLTCEESWE LLEKISLSGR ENIEPMLVKK MEEIGKQIVV RCGGLPLAIT VLGGLLATKS TWNEWQRVCE NIKSYVSNGG
401: SSNGSKNMLV ADVLCLSYEY LPPHVKQCFL YFAHYPEDYE VHVGTLVSYC IAEGMVMPVK HTEAGTTVED VGQDYLEELV KRSMVMVGRR DIVTSEVMTC
501: RMHDLMREVC LQKAKQESFV QVIDSRDQDE AEAFISLSTN TSRRISVQLH GGAEEHHIKS LSQVSFRKMK LLRVLDLEGA QIEGGKLPDD VGDLIHLRNL
601: SVRLTNVKEL TSSIGNLKLM ITLDLFVKGQ LYIPNQLWDF PVGKCNPRDL LAMTSLRRLS INLSSQNTDF VVVSSLSKVL KRLRGLTINV PCEPMLPPVD
701: VTQLVSAFTN LCELELFLKL EKLPGEQSFS SDLGALRLWQ CGLVDDPFMV LEKLPNLKIL QLFEGSFVGS KLCCSKNLEN LEEWTVEDGA MMRLVTVELK
801: CCNKLKSVPE GTRFLKNLQE VEIGNRTKAF KDKLISGGED FYKVQHVPCV VFENCEL

Arabidopsis Description

Putative disease resistance protein At1g50180 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX38]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.