Factsheet for PGSC0003DMT400030011

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400030019	Potato	cytosol	86.94	86.73
PGSC0003DMT400082507	Potato	cytosol	35.99	83.47
PGSC0003DMT400062272	Potato	cytosol	48.1	80.2
PGSC0003DMT400030040	Potato	cytosol	57.84	80.1
PGSC0003DMT400016712	Potato	cytosol	78.38	78.57
PGSC0003DMT400059833	Potato	cytosol	40.74	78.49
PGSC0003DMT400082505	Potato	cytosol	41.09	78.46
PGSC0003DMT400030031	Potato	cytosol	29.45	77.26
PGSC0003DMT400082452	Potato	cytosol	45.13	75.55
PGSC0003DMT400031142	Potato	cytosol	74.47	75.18
PGSC0003DMT400030042	Potato	cytosol	76.37	74.77
PGSC0003DMT400031116	Potato	cytosol	68.88	74.45
PGSC0003DMT400030030	Potato	nucleus	64.85	74.29
PGSC0003DMT400030034	Potato	cytosol	73.28	73.54
PGSC0003DMT400016707	Potato	cytosol	71.5	70.82
PGSC0003DMT400059836	Potato	cytosol	32.78	70.59
PGSC0003DMT400031132	Potato	cytosol	66.98	70.5
PGSC0003DMT400030044	Potato	mitochondrion	68.88	68.16
PGSC0003DMT400031120	Potato	cytosol	23.99	66.01
PGSC0003DMT400030022	Potato	cytosol	40.38	64.89
PGSC0003DMT400027529	Potato	cytosol	57.6	54.93
PGSC0003DMT400027536	Potato	cytosol	29.57	39.9
CDX82995	Canola	cytosol	13.9	37.5
AT3G46730.1	Thale cress	cytosol	35.04	34.83
AT3G46530.1	Thale cress	nucleus	33.49	33.77
PGSC0003DMT400005012	Potato	cytosol	13.78	33.53
Bra037123.1-P	Field mustard	cytosol	31.95	33.46
CDX82996	Canola	cytosol	14.96	33.42
PGSC0003DMT400010987	Potato	cytosol	7.6	33.33
PGSC0003DMT400062366	Potato	cytosol	14.61	32.98
CDX68399	Canola	cytosol	8.43	32.57
GSMUA_AchrUn_...	Banana	cytosol	10.57	32.48
AT3G46710.1	Thale cress	cytosol	32.3	32.11
CDY18642	Canola	cytosol, nucleus, peroxisome	14.01	31.98
PGSC0003DMT400025440	Potato	cytosol, mitochondrion	17.7	31.91
PGSC0003DMT400036104	Potato	extracellular, plasma membrane	12.95	31.41
CDX82994	Canola	nucleus	16.51	30.82
GSMUA_Achr7P20240_001	Banana	mitochondrion	25.53	30.76
TraesCS2D01G510300.1	Wheat	cytosol	19.95	30.71
PGSC0003DMT400048669	Potato	cytosol	7.6	30.33
TraesCS2D01G510100.1	Wheat	cytosol	17.46	30.18
TraesCS7A01G562500.1	Wheat	cytosol	19.83	30.09
Os11t0633500-01	Rice	cytosol	18.65	29.73
GSMUA_Achr7P20230_001	Banana	cytosol	31.35	29.73
PGSC0003DMT400025439	Potato	cytosol	19.36	29.64
GSMUA_Achr7P20220_001	Banana	cytosol	31.59	29.59
CDX81333	Canola	nucleus	18.88	29.23
TraesCS2B01G536900.1	Wheat	cytosol	19.0	28.93
TraesCS6B01G447800.1	Wheat	cytosol	18.17	28.76
PGSC0003DMT400046494	Potato	cytosol	9.26	28.47
TraesCS2D01G510000.1	Wheat	cytosol	25.89	28.31
PGSC0003DMT400075439	Potato	cytosol	32.07	28.24
PGSC0003DMT400056264	Potato	endoplasmic reticulum	29.57	28.07
CDX68397	Canola	cytosol	8.19	27.94
GSMUA_AchrUn_...	Banana	cytosol	24.7	27.73
PGSC0003DMT400005034	Potato	plastid	13.42	27.7
TraesCS2A01G477200.1	Wheat	cytosol	22.21	27.66
TraesCS6D01G387400.1	Wheat	cytosol	18.65	27.5
TraesCS6A01G403900.1	Wheat	plasma membrane, vacuole	24.7	27.48
TraesCS6A01G404000.1	Wheat	cytosol	17.81	27.42
PGSC0003DMT400056267	Potato	cytosol	14.85	27.41
PGSC0003DMT400012121	Potato	extracellular, golgi	17.7	27.34
TraesCS7B01G500800.1	Wheat	cytosol	23.16	27.05
TraesCS6B01G448100.1	Wheat	cytosol	25.18	26.9
PGSC0003DMT400005011	Potato	cytosol, plastid	18.88	26.86
TraesCS5D01G269100.1	Wheat	cytosol	21.97	26.85
TraesCS7D01G548100.1	Wheat	cytosol	28.27	26.77
PGSC0003DMT400005032	Potato	cytosol	18.53	26.67
TraesCS7B01G501000.1	Wheat	cytosol	27.67	26.66
PGSC0003DMT400021403	Potato	cytosol	30.05	26.63
PGSC0003DMT400005041	Potato	cytosol	19.12	26.57
PGSC0003DMT400047508	Potato	cytosol	12.59	26.57
TraesCS7A01G562000.1	Wheat	cytosol	27.55	26.51
PGSC0003DMT400056268	Potato	cytosol	19.24	26.38
TraesCS6B01G447900.1	Wheat	cytosol	22.92	26.33
TraesCS6B01G448300.2	Wheat	cytosol, peroxisome, plasma membrane	24.7	26.3
TraesCS7B01G501900.1	Wheat	cytosol	27.2	26.29
TraesCS7B01G423500.1	Wheat	cytosol	26.96	26.21
TraesCS7B01G500700.1	Wheat	cytosol	26.37	26.15
TraesCS2B01G151600.2	Wheat	cytosol	26.25	26.09
TraesCS7A01G561700.1	Wheat	cytosol	26.84	26.04
PGSC0003DMT400010966	Potato	cytosol	25.53	26.0
TraesCS1B01G336700.1	Wheat	cytosol	24.7	25.94
PGSC0003DMT400066996	Potato	cytosol	27.2	25.85
TraesCS7B01G501100.1	Wheat	cytosol	26.72	25.83
PGSC0003DMT400051415	Potato	cytosol	14.85	25.83
TraesCS7A01G561900.4	Wheat	cytosol	28.15	25.82
TraesCS2A01G459100.1	Wheat	plastid	24.35	25.79
OQU82378	Sorghum	nucleus	25.65	25.78
PGSC0003DMT400062762	Potato	plastid	12.11	25.76
TraesCS7B01G500900.1	Wheat	cytosol	26.6	25.6
PGSC0003DMT400050509	Potato	cytosol	26.6	25.57
HORVU1Hr1G075170.1	Barley	cytosol	26.13	25.29
TraesCS1D01G324700.2	Wheat	cytosol	26.13	25.29
TraesCS7B01G501200.1	Wheat	cytosol	16.51	25.27
TraesCS5A01G261700.1	Wheat	cytosol	26.37	25.2
TraesCS6D01G387500.1	Wheat	cytosol, plastid	23.63	25.16
PGSC0003DMT400080647	Potato	cytosol	26.96	25.14
HORVU2Hr1G022620.8	Barley	cytosol	25.89	25.03
PGSC0003DMT400066993	Potato	cytosol, plasma membrane	26.84	24.78
TraesCS2D01G481300.1	Wheat	cytosol	28.15	24.76
PGSC0003DMT400060798	Potato	cytosol	23.75	24.6
HORVU5Hr1G072540.26	Barley	cytosol	25.65	24.57
TraesCS1A01G323600.1	Wheat	cytosol	25.42	24.57
TraesCS2B01G507100.1	Wheat	cytosol	27.67	24.55
PGSC0003DMT400017538	Potato	nucleus	25.89	24.55
PGSC0003DMT400046497	Potato	cytosol	9.5	24.54
TraesCS5A01G261600.1	Wheat	cytosol	25.65	24.52
PGSC0003DMT400088449	Potato	cytosol	26.48	24.51
PGSC0003DMT400025432	Potato	cytosol	19.71	24.34
PGSC0003DMT400012479	Potato	cytosol	19.0	24.32
PGSC0003DMT400093366	Potato	cytosol	20.9	24.31
PGSC0003DMT400020346	Potato	cytosol	12.71	24.26
PGSC0003DMT400007570	Potato	cytosol	26.13	24.23
PGSC0003DMT400020342	Potato	cytosol	26.01	24.17
PGSC0003DMT400034063	Potato	cytosol	23.16	24.13
PGSC0003DMT400020353	Potato	cytosol, nucleus, plastid	25.89	24.11
TraesCS7B01G449900.2	Wheat	cytosol	25.3	24.07
PGSC0003DMT400012486	Potato	cytosol	24.94	24.03
TraesCS6B01G448400.1	Wheat	cytosol	24.11	23.94
PGSC0003DMT400005013	Potato	plastid	24.94	23.84
PGSC0003DMT400005017	Potato	cytosol, plastid	24.94	23.78
PGSC0003DMT400036070	Potato	cytosol, plastid	26.13	23.76
PGSC0003DMT400078333	Potato	cytosol, vacuole	24.35	23.67
TraesCS2B01G507000.1	Wheat	cytosol	20.43	23.53
Os10t0183000-01	Rice	plasma membrane	24.94	23.49
PGSC0003DMT400019329	Potato	cytosol	20.43	23.43
PGSC0003DMT400010970	Potato	plasma membrane	22.92	23.42
PGSC0003DMT400062184	Potato	cytosol	24.11	23.39
PGSC0003DMT400002788	Potato	cytosol	23.63	23.38
Os03t0709200-01	Rice	cytosol	26.6	23.36
PGSC0003DMT400005732	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	7.72	23.3
PGSC0003DMT400019327	Potato	cytosol, extracellular	13.3	23.28
PGSC0003DMT400019683	Potato	cytosol, mitochondrion	13.66	23.28
TraesCS5B01G259900.1	Wheat	cytosol	25.65	23.25
PGSC0003DMT400062766	Potato	cytosol	14.85	23.23
PGSC0003DMT400005040	Potato	cytosol, nucleus, peroxisome	15.8	23.21
PGSC0003DMT400058647	Potato	cytosol, nucleus	17.1	23.15
PGSC0003DMT400058642	Potato	cytosol	12.47	23.08
PGSC0003DMT400020349	Potato	cytosol	25.89	22.95
PGSC0003DMT400062180	Potato	cytosol	22.92	22.89
PGSC0003DMT400076082	Potato	cytosol	18.05	22.82
PGSC0003DMT400020360	Potato	cytosol	25.77	22.75
PGSC0003DMT400042194	Potato	cytosol	25.42	22.74
PGSC0003DMT400050826	Potato	cytosol	24.35	22.58
TraesCS6B01G448000.1	Wheat	cytosol	7.24	22.51
PGSC0003DMT400078334	Potato	cytosol, plastid	24.58	22.5
PGSC0003DMT400047502	Potato	cytosol	25.3	22.4
PGSC0003DMT400069012	Potato	cytosol	14.85	22.36
PGSC0003DMT400005006	Potato	vacuole	23.4	22.11
TraesCS7B01G501300.1	Wheat	cytosol	7.24	22.1
PGSC0003DMT400005052	Potato	plastid	19.36	22.0
Zm00001d045512_P001	Maize	cytosol, mitochondrion	21.73	21.97
PGSC0003DMT400041023	Potato	cytosol	21.73	21.86
PGSC0003DMT400005733	Potato	cytosol	13.54	21.67
PGSC0003DMT400019300	Potato	cytosol, plasma membrane, plastid	17.46	21.59
PGSC0003DMT400050805	Potato	cytosol	22.68	21.58
PGSC0003DMT400075885	Potato	cytosol, plastid	22.57	21.42
PGSC0003DMT400050821	Potato	cytosol	22.45	21.38
PGSC0003DMT400019304	Potato	cytosol	21.97	21.05
PGSC0003DMT400019301	Potato	cytosol	20.67	20.54
PGSC0003DMT400047510	Potato	nucleus	24.58	20.37
PGSC0003DMT400078332	Potato	cytosol	10.93	20.22
PGSC0003DMT400005046	Potato	cytosol, extracellular	5.23	20.18
PGSC0003DMT400036058	Potato	cytosol	18.29	20.08
TraesCS2A01G129300.1	Wheat	cytosol	5.94	20.0
PGSC0003DMT400068337	Potato	extracellular	5.94	19.46
PGSC0003DMT400094032	Potato	cytosol	9.03	19.44
PGSC0003DMT400019678	Potato	cytosol, extracellular	7.24	19.24
PGSC0003DMT400030826	Potato	cytosol	10.45	18.64
PGSC0003DMT400020350	Potato	cytosol, nucleus, plasma membrane	16.39	15.81

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:102590927	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150
GO:GO:0043531	InterPro:IPR032675	InterPro:IPR036388	InterPro:LRR_dom_sf	UniProt:M1ATN9	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	EnsemblPlantsGene:PGSC0003DMG400011517	PGSC:PGSC0003DMG400011517	EnsemblPlants:PGSC0003DMT400030011	PRINTS:PR00364
PANTHER:PTHR43886	PANTHER:PTHR43886:SF7	InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI000296C1BF
InterPro:WH-like_DNA-bd_sf	RefSeq:XP_015169822.1	SEG:seg	:	:	:

Description

HJTR2GH1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400011517]

Coordinates

chr4:+:4715071..4717942

Molecular Weight (calculated)

97071.1 Da

IEP (calculated)

6.746

GRAVY (calculated)

-0.152

Length

842 amino acids

Sequence
(BLAST)

001: MADAVVSFAV QKLGDFLIQE VNLRLSLRED MKWMRTELLF MQSFLKDTEL KQYGDHTIQQ WVTEMNSIAN DAVAILETYS LEAGKGASRL KACACICRKE
101: KKFYNVAKEI QSLKQRIMDI SRKRDTYSIT NINSNAGEGT SNQVTTLRRT TSYVDDQDYI FVGLQDVVES LLAELLKAEP RRNVLSIHGM GGLGKTTLAR
201: NLYNSPNIVS SFPTRTWICV SQEYNTMDLF KTIIKSIQGC AKETLDLLEK MAETDLENHL RDLLEGCKYL VVVDDVWQKE AWESLKRAFP DRNNGSRVII
301: TTRNQDVAER ANNRGFVHKL RFLKQEESWD LFCRKLLDVR AMVPAMESLA KDMVEKCRGL PLAIVVLSGL LSHRWGLDKW QNVKDCLWKD IEEDSIEISY
401: ILSLSFNDLS AALKKCFLYF GVFPEDQVID ADDIMRLWMT EGFIIPRGEE RMEDVAEGFL NELIRRSLVQ VAQTFWEKVT VCRVHDLLRD LAIQKALEVN
501: FFDIYDPRKN LKSTSCIRHA IHSEGERYLS SLDLSNSKLR SIMFFDPHIC NVFQHIDVFR HIYVLYLDID YGKVIPDAIG SLYNLKLLRL SVVSKIPSSI
601: GNLKNLQTLV VVNMDRRFCQ LPPETADLIN LRHLVVPYSI PLAGISKLTS LQVLRLDCDQ WKEVDPVDLV NLRELEMRNI YKSYSLNNIS SLKNLNTLKL
701: CILLGPQSTY PFPSLEFVNS CEKLQKLLLG GRLEKLPVFP DSITMIFLWE SRLTKDPMPI LGMLPNLRNL ELEAAYEGEE IMCSDYSFSQ LELLHLYGLD
801: NLERWHLGTN AMPLIKDLVI HHCPKLREIP ERMKDVKHFK RI

Best Arabidopsis Sequence Match ( AT3G46530.1 )
(BLAST)

001: MVDAITEFVV GKIGNYLIEE ASMFMAVKED LEELKTELTC IHGYLKDVEA REREDEVSKE WSKLVLDFAY DVEDVLDTYH LKLEERSQRR GLRRLTNKIG
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC

Arabidopsis Description

RPP13Disease resistance protein RPP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M667]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.