Factsheet for PGSC0003DMT400019683

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

mitochondrion: 24351685

msms PMID: 24351685 doi

F Salvato, JF Havelund, M Chen, RS Rao, A Rogowska-Wrzesinska, ON Jensen, DR Gang, JJ Thelen, IM Møller

Department of Biochemistry and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400094032	Potato	cytosol	62.35	78.77
PGSC0003DMT400046497	Potato	cytosol	47.17	71.47
PGSC0003DMT400005733	Potato	cytosol	67.81	63.69
PGSC0003DMT400005041	Potato	cytosol	76.52	62.38
PGSC0003DMT400005040	Potato	cytosol, nucleus, peroxisome	69.23	59.69
PGSC0003DMT400005032	Potato	cytosol	69.64	58.8
Solyc10g051050.1.1	Tomato	cytosol	56.28	50.27
PGSC0003DMT400078332	Potato	cytosol	45.14	49.01
PGSC0003DMT400005052	Potato	plastid	66.8	44.53
PGSC0003DMT400005017	Potato	cytosol, plastid	70.45	39.41
PGSC0003DMT400005006	Potato	vacuole	67.81	37.6
PGSC0003DMT400005013	Potato	plastid	67.0	37.57
PGSC0003DMT400005012	Potato	cytosol	25.1	35.84
PGSC0003DMT400051415	Potato	cytosol	33.0	33.68
PGSC0003DMT400002788	Potato	cytosol	54.45	31.61
PGSC0003DMT400078334	Potato	cytosol, plastid	57.49	30.87
PGSC0003DMT400078333	Potato	cytosol, vacuole	53.64	30.6
PGSC0003DMT400005011	Potato	cytosol, plastid	33.0	27.53
PGSC0003DMT400047508	Potato	cytosol	21.26	26.32
PGSC0003DMT400012479	Potato	cytosol	33.2	24.92
PGSC0003DMT400069012	Potato	cytosol	27.13	23.97
PGSC0003DMT400058642	Potato	cytosol	21.26	23.08
PGSC0003DMT400025440	Potato	cytosol, mitochondrion	21.46	22.7
PGSC0003DMT400093366	Potato	cytosol	33.0	22.51
PGSC0003DMT400020346	Potato	cytosol	19.84	22.22
PGSC0003DMT400056267	Potato	cytosol	19.03	20.61
PGSC0003DMT400059836	Potato	cytosol	16.19	20.46
PGSC0003DMT400062766	Potato	cytosol	22.27	20.45
PGSC0003DMT400050509	Potato	cytosol	36.23	20.43
VIT_16s0022g01330.t01	Wine grape	cytosol	25.91	20.22
PGSC0003DMT400017538	Potato	nucleus	36.23	20.16
PGSC0003DMT400062184	Potato	cytosol	34.01	19.35
PGSC0003DMT400036070	Potato	cytosol, plastid	36.23	19.33
TraesCS7B01G501200.1	Wheat	cytosol	21.46	19.27
PGSC0003DMT400010966	Potato	cytosol	32.19	19.23
PGSC0003DMT400012486	Potato	cytosol	34.01	19.22
PGSC0003DMT400062180	Potato	cytosol	32.59	19.1
PGSC0003DMT400019329	Potato	cytosol	27.94	18.8
PGSC0003DMT400012121	Potato	extracellular, golgi	20.65	18.72
PGSC0003DMT400005034	Potato	plastid	15.38	18.63
GSMUA_Achr7P20240_001	Banana	mitochondrion	26.32	18.6
VIT_15s0045g01020.t01	Wine grape	cytosol	23.68	18.2
PGSC0003DMT400034063	Potato	cytosol	29.76	18.19
PGSC0003DMT400031120	Potato	cytosol	11.13	17.97
PGSC0003DMT400056264	Potato	endoplasmic reticulum	31.98	17.81
PGSC0003DMT400030040	Potato	cytosol	21.86	17.76
TraesCS6A01G404000.1	Wheat	cytosol	19.43	17.55
PGSC0003DMT400050821	Potato	cytosol	31.17	17.42
PGSC0003DMT400060798	Potato	cytosol	28.34	17.22
PGSC0003DMT400042194	Potato	cytosol	32.79	17.22
PGSC0003DMT400050805	Potato	cytosol	30.57	17.06
PGSC0003DMT400025432	Potato	cytosol	23.48	17.01
PGSC0003DMT400020350	Potato	cytosol, nucleus, plasma membrane	29.76	16.84
TraesCS6D01G387400.1	Wheat	cytosol	19.43	16.81
PGSC0003DMT400047502	Potato	cytosol	32.19	16.72
PGSC0003DMT400020342	Potato	cytosol	30.16	16.45
PGSC0003DMT400007570	Potato	cytosol	29.96	16.3
PGSC0003DMT400019300	Potato	cytosol, plasma membrane, plastid	22.47	16.3
PGSC0003DMT400088449	Potato	cytosol	29.96	16.26
PGSC0003DMT400020353	Potato	cytosol, nucleus, plastid	29.76	16.26
PGSC0003DMT400030031	Potato	cytosol	10.53	16.2
PGSC0003DMT400020349	Potato	cytosol	30.57	15.89
PGSC0003DMT400020360	Potato	cytosol	30.16	15.62
PGSC0003DMT400019304	Potato	cytosol	27.53	15.47
PGSC0003DMT400047510	Potato	nucleus	31.78	15.45
TraesCS2B01G507000.1	Wheat	cytosol	22.67	15.32
PGSC0003DMT400080647	Potato	cytosol	27.73	15.17
PGSC0003DMT400041023	Potato	cytosol	25.51	15.05
PGSC0003DMT400066996	Potato	cytosol	26.92	15.01
PGSC0003DMT400010970	Potato	plasma membrane	24.9	14.93
PGSC0003DMT400075885	Potato	cytosol, plastid	26.72	14.88
PGSC0003DMT400076082	Potato	cytosol	20.04	14.86
VIT_15s0046g03660.t01	Wine grape	cytosol	24.7	14.51
PGSC0003DMT400025439	Potato	cytosol	15.99	14.36
GSMUA_AchrUn_...	Banana	cytosol	21.66	14.27
PGSC0003DMT400066993	Potato	cytosol, plasma membrane	26.32	14.25
GSMUA_Achr7P20220_001	Banana	cytosol	25.91	14.24
GSMUA_Achr7P20230_001	Banana	cytosol	25.51	14.19
PGSC0003DMT400031116	Potato	cytosol	22.27	14.12
PGSC0003DMT400062366	Potato	cytosol	10.53	13.94
PGSC0003DMT400030011	Potato	cytosol	23.28	13.66
VIT_15s0046g02730.t01	Wine grape	cytosol	25.3	13.59
VIT_15s0046g02750.t01	Wine grape	cytosol	25.71	13.57
PGSC0003DMT400050826	Potato	cytosol	24.9	13.55
GSMUA_AchrUn_...	Banana	cytosol	7.49	13.5
PGSC0003DMT400027529	Potato	cytosol	24.09	13.48
PGSC0003DMT400016712	Potato	cytosol	22.87	13.45
PGSC0003DMT400016707	Potato	cytosol	22.87	13.29
PGSC0003DMT400030019	Potato	cytosol	22.67	13.27
VIT_00s0448g00020.t01	Wine grape	cytosol	25.3	13.26
KRG88521	Soybean	cytosol	23.08	13.23
VIT_15s0046g02820.t01	Wine grape	cytosol	25.1	13.14
KRH23932	Soybean	cytosol	24.7	13.13
KRH17117	Soybean	cytosol	23.28	13.11
PGSC0003DMT400030034	Potato	cytosol	22.27	13.11
PGSC0003DMT400019301	Potato	cytosol	22.47	13.11
PGSC0003DMT400031142	Potato	cytosol	22.06	13.07
VIT_15s0046g02810.t01	Wine grape	cytosol	24.7	13.02
VIT_15s0046g02800.t01	Wine grape	cytosol	17.81	12.83
KRH01598	Soybean	cytosol	22.87	12.78
TraesCS6B01G448300.2	Wheat	cytosol, peroxisome, plasma membrane	20.45	12.77
KRH01534	Soybean	cytosol	21.46	12.68
TraesCS2D01G510300.1	Wheat	cytosol	13.97	12.61
TraesCS7B01G501000.1	Wheat	cytosol	22.27	12.59
TraesCS6B01G447900.1	Wheat	cytosol	18.62	12.55
TraesCS6D01G387500.1	Wheat	cytosol, plastid	20.04	12.52
TraesCS2B01G151600.2	Wheat	cytosol	21.46	12.51
PGSC0003DMT400031132	Potato	cytosol	20.24	12.5
TraesCS7B01G423500.1	Wheat	cytosol	21.86	12.47
TraesCS7A01G561700.1	Wheat	cytosol	21.86	12.44
KRH45220	Soybean	cytosol, extracellular, plastid	22.47	12.42
TraesCS6B01G448100.1	Wheat	cytosol	19.64	12.31
KRH01595	Soybean	cytosol	22.27	12.28
TraesCS7B01G500700.1	Wheat	cytosol	21.05	12.25
PGSC0003DMT400030044	Potato	mitochondrion	21.05	12.22
PGSC0003DMT400056268	Potato	cytosol	15.18	12.21
PGSC0003DMT400030042	Potato	cytosol	21.26	12.21
TraesCS7B01G501900.1	Wheat	cytosol	21.46	12.17
TraesCS7A01G562000.1	Wheat	cytosol	21.46	12.11
TraesCS7B01G500900.1	Wheat	cytosol	21.46	12.11
PGSC0003DMT400030826	Potato	cytosol	11.54	12.08
TraesCS7B01G501100.1	Wheat	cytosol	21.26	12.06
HORVU5Hr1G072540.26	Barley	cytosol	21.26	11.95
OQU82378	Sorghum	nucleus	20.24	11.93
TraesCS2B01G507100.1	Wheat	cytosol	22.87	11.91
VIT_15s0045g00980.t01	Wine grape	cytosol	14.37	11.89
HORVU2Hr1G022620.8	Barley	cytosol	20.85	11.83
HORVU1Hr1G075170.1	Barley	cytosol	20.65	11.72
TraesCS5A01G261700.1	Wheat	cytosol	20.85	11.69
TraesCS7A01G561900.4	Wheat	cytosol	21.66	11.66
TraesCS6A01G403900.1	Wheat	plasma membrane, vacuole	17.81	11.62
PGSC0003DMT400075439	Potato	cytosol	22.47	11.61
TraesCS1D01G324700.2	Wheat	cytosol	20.24	11.49
TraesCS2D01G481300.1	Wheat	cytosol	22.27	11.49
TraesCS1A01G323600.1	Wheat	cytosol	20.24	11.48
TraesCS7D01G548100.1	Wheat	cytosol	20.65	11.47
TraesCS5A01G261600.1	Wheat	cytosol	20.24	11.35
TraesCS2D01G510000.1	Wheat	cytosol	17.61	11.3
Os10t0183000-01	Rice	plasma membrane	20.45	11.3
PGSC0003DMT400082507	Potato	cytosol	8.3	11.29
PGSC0003DMT400030030	Potato	nucleus	16.8	11.29
Zm00001d045512_P001	Maize	cytosol, mitochondrion	19.03	11.28
PGSC0003DMT400021403	Potato	cytosol	21.66	11.26
TraesCS7B01G449900.2	Wheat	cytosol	20.04	11.19
TraesCS5B01G259900.1	Wheat	cytosol	20.85	11.09
Os03t0709200-01	Rice	cytosol	21.46	11.05
TraesCS7B01G500800.1	Wheat	cytosol	15.99	10.96
TraesCS2A01G477200.1	Wheat	cytosol	14.98	10.95
TraesCS2A01G459100.1	Wheat	plastid	17.61	10.94
TraesCS1B01G336700.1	Wheat	cytosol	17.61	10.85
TraesCS6B01G448400.1	Wheat	cytosol	17.81	10.38
TraesCS5D01G269100.1	Wheat	cytosol	14.37	10.3
PGSC0003DMT400082505	Potato	cytosol	8.91	9.98
VIT_15s0045g00680.t01	Wine grape	cytosol	15.59	9.96
PGSC0003DMT400062272	Potato	cytosol	9.72	9.5
PGSC0003DMT400082452	Potato	cytosol	9.51	9.34
PGSC0003DMT400036104	Potato	extracellular, plasma membrane	6.28	8.93
VIT_15s0045g00880.t01	Wine grape	cytosol	13.36	8.74
VIT_15s0045g00810.t01	Wine grape	cytosol	7.49	8.69
PGSC0003DMT400058647	Potato	cytosol, nucleus	10.93	8.68
PGSC0003DMT400036058	Potato	cytosol	13.36	8.6
TraesCS7A01G562500.1	Wheat	cytosol	9.51	8.47
Os11t0633500-01	Rice	cytosol	8.7	8.14
PGSC0003DMT400019327	Potato	cytosol, extracellular	7.89	8.11
VIT_15s0045g00640.t01	Wine grape	cytosol	7.89	8.07
TraesCS2B01G536900.1	Wheat	cytosol	8.91	7.96
TraesCS6B01G447800.1	Wheat	cytosol	8.5	7.89
PGSC0003DMT400046494	Potato	cytosol	4.25	7.66
PGSC0003DMT400030022	Potato	cytosol	7.29	6.87
TraesCS2D01G510100.1	Wheat	cytosol	6.28	6.37
PGSC0003DMT400062762	Potato	plastid	5.06	6.31
KRG88520	Soybean	plastid	4.05	5.76
VIT_15s0045g00920.t01	Wine grape	cytosol	5.47	5.19
PGSC0003DMT400027536	Potato	cytosol	6.28	4.97
PGSC0003DMT400059833	Potato	cytosol	4.05	4.58
PGSC0003DMT400005732	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	2.02	3.58
PGSC0003DMT400019678	Potato	cytosol, extracellular	1.82	2.84
PGSC0003DMT400048669	Potato	cytosol	0.81	1.9
PGSC0003DMT400005046	Potato	cytosol, extracellular	0.4	0.92
PGSC0003DMT400010987	Potato	cytosol	0.0	0.0
PGSC0003DMT400068337	Potato	extracellular	0.0	0.0
TraesCS2A01G129300.1	Wheat	cytosol	0.0	0.0
TraesCS6B01G448000.1	Wheat	cytosol	0.0	0.0
TraesCS7B01G501300.1	Wheat	cytosol	0.0	0.0
VIT_15s0021g00130.t01	Wine grape	cytosol, nucleus, plastid	0.0	0.0
VIT_15s0045g01010.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400019683	EnsemblPlantsGene:PGSC0003DMG400007606	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	PANTHER:PTHR43886	PANTHER:PTHR43886:SF17
PFAM:PF00931	PGSC:PGSC0003DMG400007606	SUPFAM:SSF52058	UniParc:UPI0002952BC2	UniProt:M1ACF5	MapMan:35.1

Description

Disease resistance protein [Source:PGSC_GENE;Acc:PGSC0003DMG400007606]

Coordinates

chr11:-:5774170..5775654

Molecular Weight (calculated)

57263.5 Da

IEP (calculated)

5.027

GRAVY (calculated)

-0.085

Length

494 amino acids

Sequence
(BLAST)

001: MDPTHDNWKK VEENLNSFFG TVSERCQSIL SLSYNYLPQY LRACFLYVGG FPEDMEIDVS KLIRLWISEQ FVKARSNKRL EVVAEEYLQE LIDRSLILAD
101: KQWVHGMMRS CKIHDLLRQL CLSETHTENV VHVMNGKVLK AIDGQCRVIL LSNYEEKYDY FPRHSSGIVR TFISMGVAFP KEMCSIISEF KLIKVLDVLP
201: VLYDFSSVIP ELVHLRYVAA RIEEGLSLAK LRNLQTIILQ RYFSRPTTLK QPVDIWSMSE IRHVDIQFPL YISNPVEAEQ PLCLLNNLQT LYPYNSPFVE
301: EIIRRTPNLK KLKILDISEH SDWAVILDSL SILQDLETLH IQNIDPMIIS EDISLPNLKE LNLSNTCIPW EVVNLLANLP NLEKLYGHAA FDGTDWKVDE
401: DVVFHKLKYL RLYTCRDLER WELAAGSDNF PMLENLILFE LPKLEEIPES IGEVMTLKFI RIVNCGSGVK TSAKKIQEEQ ESLGNYELDV QIYP

Best Arabidopsis Sequence Match ( AT3G46730.1 )
(BLAST)

001: MVDAVTGFVL NKIGGYLINE VLALMGVKDD LEELKTELTC IHGYLKDVEA REREDEVSKE WTKLVLDIAY DIEDVLDTYF LKLEERSLRR GLLRLTNKIG
101: KKRDAYNIVE DIRTLKRRIL DITRKRETFG IGSFNEPRGE NITNVRVRQL RRAPPVDQEE LVVGLEDDVK ILLVKLLSDN EKDKSYIISI FGMGGLGKTA
201: LARKLYNSGD VKRRFDCRAW TYVSQEYKTR DILIRIIRSL GIVSAEEMEK IKMFEEDEEL EVYLYGLLEG KNYMVVVDDV WDPDAWESLK RALPCDHRGS
301: KVIITTRIRA IAEGVEGTVY AHKLRFLTFE ESWTLFERKA FSNIEKVDED LQRTGKEMVK KCGGLPLAIV VLSGLLSRKR TNEWHEVCAS LWRRLKDNSI
401: HISTVFDLSF KEMRHELKLC FLYFSVFPED YEIKVEKLIH LLVAEGFIQE DEEMMMEDVA RCYIDELVDR SLVKAERIER GKVMSCRIHD LLRDLAIKKA
501: KELNFVNVYN EKQHSSDICR REVVHHLMND YYLCDRRVNK RMRSFLFIGE RRGFGYVNTT NLKLKLLRVL NMEGLLFVSK NISNTLPDVI GELIHLRYLG
601: IADTYVSILP ASISNLRFLQ TLDASGNDPF QYTTDLSKLT SLRHVIGKFV GECLIGEGVN LQTLRSISSY SWSKLNHELL RNLQDLEIYD HSKWVDQRRV
701: PLNFVSFSKP KNLRVLKLEM RNFKLSSESR TTIGLVDVNF PSLESLTLVG TTLEENSMPA LQKLPRLEDL VLKDCNYSGV KIMSISAQGF GRLKNLEMSM
801: ERRGHGLDEL RIEEEAMPSL IKLTVKGRLE LTKLMIPDRL KAFVRRN

Arabidopsis Description

RPP13L3Putative disease resistance RPP13-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9STE7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.