Factsheet for PGSC0003DMT400020360

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400020349	Potato	cytosol	97.06	97.47
PGSC0003DMT400062366	Potato	cytosol	27.57	70.51
PGSC0003DMT400007570	Potato	cytosol	65.2	68.5
PGSC0003DMT400020353	Potato	cytosol, nucleus, plastid	63.84	67.37
PGSC0003DMT400036104	Potato	extracellular, plasma membrane	24.11	66.28
PGSC0003DMT400010987	Potato	cytosol	13.31	66.15
PGSC0003DMT400020342	Potato	cytosol	62.79	66.11
PGSC0003DMT400020346	Potato	cytosol	27.99	60.54
PGSC0003DMT400010966	Potato	cytosol	50.94	58.77
PGSC0003DMT400068337	Potato	extracellular	15.3	56.81
PGSC0003DMT400010970	Potato	plasma membrane	46.65	54.0
PGSC0003DMT400020350	Potato	cytosol, nucleus, plasma membrane	41.61	45.48
PGSC0003DMT400036058	Potato	cytosol	35.64	44.33
PGSC0003DMT400005012	Potato	cytosol	15.41	42.49
PGSC0003DMT400048669	Potato	cytosol	8.7	39.34
PGSC0003DMT400046494	Potato	cytosol	11.01	38.32
PGSC0003DMT400025440	Potato	cytosol, mitochondrion	18.34	37.47
PGSC0003DMT400005034	Potato	plastid	15.72	36.76
PGSC0003DMT400047508	Potato	cytosol	14.78	35.34
PGSC0003DMT400005041	Potato	cytosol	22.33	35.15
PGSC0003DMT400012479	Potato	cytosol	24.21	35.11
PGSC0003DMT400012121	Potato	extracellular, golgi	20.02	35.05
PGSC0003DMT400062762	Potato	plastid	14.47	34.85
PGSC0003DMT400025439	Potato	cytosol	19.81	34.36
PGSC0003DMT400005032	Potato	cytosol	21.07	34.36
PGSC0003DMT400005011	Potato	cytosol, plastid	21.28	34.29
PGSC0003DMT400060798	Potato	cytosol	29.14	34.19
PGSC0003DMT400082507	Potato	cytosol	13.0	34.16
PGSC0003DMT400093366	Potato	cytosol	25.89	34.12
PGSC0003DMT400050509	Potato	cytosol	31.24	34.02
KRG88520	Soybean	plastid	12.37	34.01
PGSC0003DMT400047502	Potato	cytosol	33.86	33.96
PGSC0003DMT400030031	Potato	cytosol	11.43	33.96
PGSC0003DMT400025432	Potato	cytosol	24.21	33.87
PGSC0003DMT400034063	Potato	cytosol	28.41	33.54
PGSC0003DMT400005732	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	9.75	33.33
PGSC0003DMT400056268	Potato	cytosol	21.38	33.22
PGSC0003DMT400062180	Potato	cytosol	29.35	33.21
PGSC0003DMT400036070	Potato	cytosol, plastid	32.18	33.15
PGSC0003DMT400062766	Potato	cytosol	18.66	33.09
PGSC0003DMT400076082	Potato	cytosol	22.96	32.88
PGSC0003DMT400050821	Potato	cytosol	30.4	32.81
PGSC0003DMT400017538	Potato	nucleus	30.4	32.66
PGSC0003DMT400056264	Potato	endoplasmic reticulum	30.29	32.58
PGSC0003DMT400005040	Potato	cytosol, nucleus, peroxisome	19.5	32.46
PGSC0003DMT400051415	Potato	cytosol	16.46	32.44
PGSC0003DMT400012486	Potato	cytosol	29.66	32.38
PGSC0003DMT400005017	Potato	cytosol, plastid	29.87	32.28
PGSC0003DMT400005013	Potato	plastid	29.66	32.12
PGSC0003DMT400005052	Potato	plastid	24.84	31.98
PGSC0003DMT400078333	Potato	cytosol, vacuole	28.93	31.87
PGSC0003DMT400002788	Potato	cytosol	28.41	31.84
PGSC0003DMT400042194	Potato	cytosol	31.24	31.67
PGSC0003DMT400050805	Potato	cytosol	29.35	31.64
PGSC0003DMT400047510	Potato	nucleus	33.65	31.59
PGSC0003DMT400056267	Potato	cytosol	15.09	31.58
PGSC0003DMT400062184	Potato	cytosol	28.62	31.45
PGSC0003DMT400005006	Potato	vacuole	29.25	31.31
PGSC0003DMT400078334	Potato	cytosol, plastid	29.77	30.87
PGSC0003DMT400046497	Potato	cytosol	10.38	30.37
PGSC0003DMT400019683	Potato	cytosol, mitochondrion	15.62	30.16
PGSC0003DMT400005046	Potato	cytosol, extracellular	6.81	29.82
PGSC0003DMT400066996	Potato	cytosol	27.67	29.8
PGSC0003DMT400088449	Potato	cytosol	28.41	29.78
PGSC0003DMT400058642	Potato	cytosol	14.15	29.67
PGSC0003DMT400080647	Potato	cytosol	27.99	29.57
TraesCS2D01G510300.1	Wheat	cytosol	16.88	29.43
PGSC0003DMT400082452	Potato	cytosol	15.51	29.42
VIT_15s0045g00980.t01	Wine grape	cytosol	18.34	29.31
VIT_16s0022g01330.t01	Wine grape	cytosol	19.29	29.07
PGSC0003DMT400019329	Potato	cytosol	22.33	29.02
GSMUA_AchrUn_...	Banana	cytosol	8.28	28.83
PGSC0003DMT400069012	Potato	cytosol	16.77	28.62
PGSC0003DMT400062272	Potato	cytosol	15.09	28.51
PGSC0003DMT400066993	Potato	cytosol, plasma membrane	27.25	28.51
PGSC0003DMT400005733	Potato	cytosol	15.62	28.33
PGSC0003DMT400078332	Potato	cytosol	13.42	28.13
Os11t0633500-01	Rice	cytosol	15.51	28.03
PGSC0003DMT400059833	Potato	cytosol	12.79	27.92
VIT_15s0046g02800.t01	Wine grape	cytosol	20.02	27.84
GSMUA_Achr7P20240_001	Banana	mitochondrion	20.34	27.75
KRG88521	Soybean	cytosol	25.05	27.73
KRH17117	Soybean	cytosol	25.47	27.71
PGSC0003DMT400030040	Potato	cytosol	17.61	27.63
KRH01534	Soybean	cytosol	24.0	27.39
TraesCS6B01G447800.1	Wheat	cytosol	15.2	27.26
PGSC0003DMT400058647	Potato	cytosol, nucleus	17.71	27.17
TraesCS6A01G404000.1	Wheat	cytosol	15.51	27.06
PGSC0003DMT400082505	Potato	cytosol	12.47	26.98
KRH01598	Soybean	cytosol	24.95	26.92
TraesCS6B01G447900.1	Wheat	cytosol	20.65	26.88
TraesCS2D01G510100.1	Wheat	cytosol	13.63	26.69
KRH45220	Soybean	cytosol, extracellular, plastid	24.95	26.62
PGSC0003DMT400019327	Potato	cytosol, extracellular	13.42	26.61
VIT_15s0045g01020.t01	Wine grape	cytosol	17.92	26.59
TraesCS7A01G562500.1	Wheat	cytosol	15.41	26.49
PGSC0003DMT400041023	Potato	cytosol	23.17	26.4
TraesCS2B01G536900.1	Wheat	cytosol	15.3	26.4
PGSC0003DMT400031116	Potato	cytosol	21.49	26.32
PGSC0003DMT400030019	Potato	cytosol	23.27	26.3
TraesCS6D01G387400.1	Wheat	cytosol	15.72	26.27
PGSC0003DMT400019678	Potato	cytosol, extracellular	8.7	26.18
GSMUA_AchrUn_...	Banana	cytosol	20.55	26.13
GSMUA_Achr7P20230_001	Banana	cytosol	24.21	26.01
PGSC0003DMT400030030	Potato	nucleus	20.02	25.99
PGSC0003DMT400030042	Potato	cytosol	23.38	25.93
GSMUA_Achr7P20220_001	Banana	cytosol	24.42	25.92
TraesCS2A01G477200.1	Wheat	cytosol	18.34	25.89
TraesCS2D01G510000.1	Wheat	cytosol	20.86	25.84
KRH23932	Soybean	cytosol	25.16	25.83
PGSC0003DMT400030011	Potato	cytosol	22.75	25.77
TraesCS6A01G403900.1	Wheat	plasma membrane, vacuole	20.44	25.76
KRH01595	Soybean	cytosol	24.11	25.67
PGSC0003DMT400016712	Potato	cytosol	22.33	25.36
PGSC0003DMT400094032	Potato	cytosol	10.38	25.32
PGSC0003DMT400031142	Potato	cytosol	22.12	25.3
PGSC0003DMT400030034	Potato	cytosol	22.22	25.27
PGSC0003DMT400019300	Potato	cytosol, plasma membrane, plastid	18.03	25.26
PGSC0003DMT400019304	Potato	cytosol	23.27	25.26
TraesCS1B01G336700.1	Wheat	cytosol	21.17	25.19
TraesCS2B01G151600.2	Wheat	cytosol	22.33	25.15
PGSC0003DMT400027529	Potato	cytosol	23.27	25.14
PGSC0003DMT400031132	Potato	cytosol	21.07	25.12
PGSC0003DMT400050826	Potato	cytosol	23.9	25.11
VIT_15s0046g02730.t01	Wine grape	cytosol	24.21	25.11
TraesCS7B01G500800.1	Wheat	cytosol	18.97	25.1
PGSC0003DMT400016707	Potato	cytosol	22.33	25.06
PGSC0003DMT400030826	Potato	cytosol	12.37	25.0
TraesCS6B01G448100.1	Wheat	cytosol	20.65	25.0
VIT_15s0046g03660.t01	Wine grape	cytosol	22.01	24.97
OQU82378	Sorghum	nucleus	21.8	24.82
PGSC0003DMT400075885	Potato	cytosol, plastid	23.06	24.8
TraesCS7B01G501900.1	Wheat	cytosol	22.64	24.8
TraesCS6B01G448300.2	Wheat	cytosol, peroxisome, plasma membrane	20.55	24.78
PGSC0003DMT400030044	Potato	mitochondrion	22.01	24.68
HORVU1Hr1G075170.1	Barley	cytosol	22.43	24.6
TraesCS7A01G561700.1	Wheat	cytosol	22.33	24.54
TraesCS5D01G269100.1	Wheat	cytosol	17.71	24.53
TraesCS1D01G324700.2	Wheat	cytosol	22.33	24.48
TraesCS7B01G423500.1	Wheat	cytosol	22.22	24.48
TraesCS6D01G387500.1	Wheat	cytosol, plastid	20.23	24.4
TraesCS7B01G501000.1	Wheat	cytosol	22.33	24.37
TraesCS7A01G562000.1	Wheat	cytosol	22.33	24.34
HORVU2Hr1G022620.8	Barley	cytosol	22.22	24.34
TraesCS1A01G323600.1	Wheat	cytosol	22.12	24.23
VIT_15s0046g02750.t01	Wine grape	cytosol	23.69	24.15
VIT_15s0046g02810.t01	Wine grape	cytosol	23.69	24.12
TraesCS7B01G500900.1	Wheat	cytosol	22.12	24.11
TraesCS7B01G501100.1	Wheat	cytosol	22.01	24.11
TraesCS7D01G548100.1	Wheat	cytosol	22.33	23.96
PGSC0003DMT400030022	Potato	cytosol	13.1	23.86
VIT_15s0046g02820.t01	Wine grape	cytosol	23.58	23.83
TraesCS7B01G501200.1	Wheat	cytosol	13.73	23.82
VIT_00s0448g00020.t01	Wine grape	cytosol	23.38	23.65
TraesCS7A01G561900.4	Wheat	cytosol	22.64	23.53
Os10t0183000-01	Rice	plasma membrane	21.91	23.38
PGSC0003DMT400019301	Potato	cytosol	20.75	23.38
TraesCS7B01G500700.1	Wheat	cytosol	20.75	23.32
VIT_15s0045g00680.t01	Wine grape	cytosol	18.76	23.16
HORVU5Hr1G072540.26	Barley	cytosol	21.28	23.09
VIT_15s0045g00880.t01	Wine grape	cytosol	18.24	23.05
TraesCS2B01G507000.1	Wheat	cytosol	17.61	22.98
TraesCS6B01G448400.1	Wheat	cytosol	20.23	22.76
TraesCS7B01G449900.2	Wheat	cytosol	21.07	22.71
PGSC0003DMT400021403	Potato	cytosol	22.54	22.63
PGSC0003DMT400075439	Potato	cytosol	22.64	22.59
TraesCS5A01G261700.1	Wheat	cytosol	20.86	22.59
VIT_15s0021g00130.t01	Wine grape	cytosol, nucleus, plastid	7.34	22.51
TraesCS2D01G481300.1	Wheat	cytosol	22.43	22.36
TraesCS5A01G261600.1	Wheat	cytosol	20.65	22.36
PGSC0003DMT400059836	Potato	cytosol	9.12	22.25
TraesCS2B01G507100.1	Wheat	cytosol	22.12	22.23
TraesCS2A01G459100.1	Wheat	plastid	18.45	22.14
TraesCS5B01G259900.1	Wheat	cytosol	21.28	21.85
Os03t0709200-01	Rice	cytosol	21.7	21.59
PGSC0003DMT400031120	Potato	cytosol	6.81	21.24
VIT_15s0045g00920.t01	Wine grape	cytosol	11.43	20.96
Zm00001d045512_P001	Maize	cytosol, mitochondrion	18.24	20.89
TraesCS6B01G448000.1	Wheat	cytosol	5.66	19.93
TraesCS2A01G129300.1	Wheat	cytosol	5.03	19.2
VIT_15s0045g00640.t01	Wine grape	cytosol	9.64	19.05
VIT_15s0045g00810.t01	Wine grape	cytosol	8.49	19.01
TraesCS7B01G501300.1	Wheat	cytosol	5.45	18.84
PGSC0003DMT400027536	Potato	cytosol	10.69	16.35
VIT_15s0045g01010.t01	Wine grape	cytosol	3.14	15.54

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:102580627	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ProteinID:AEQ29660
ProteinID:AEQ29660.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0006950
GO:GO:0006952	GO:GO:0008150	GO:GO:0043531	InterPro:IPR032675	InterPro:IPR036388	EMBL:JF896476
InterPro:LRR_dom_sf	UniProt:M1ADD0	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	EnsemblPlantsGene:PGSC0003DMG400007872
PGSC:PGSC0003DMG400007872	EnsemblPlants:PGSC0003DMT400020360	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF17	InterPro:RX-like_CC
SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI000294C6BF	InterPro:WH-like_DNA-bd_sf	RefSeq:XP_006350138.2	SEG:seg

Description

NBS-LRR protein [Source:PGSC_GENE;Acc:PGSC0003DMG400007872]

Coordinates

chr12:-:1749066..1758197

Molecular Weight (calculated)

110426.0 Da

IEP (calculated)

4.567

GRAVY (calculated)

-0.252

Length

954 amino acids

Sequence
(BLAST)

001: MAYAAVTSLM RTIHQSMELT GCDLQPFYEK LESLRAIMEK SCNITGDHEG LTTLEVEIAE VAYKAEDMVD SKSRKVSSAE TVITRSKAFW ELCCSLEQEV
101: ECIDSFMMQW LAIWDWYNNF KDFKAQNFCL SKIPERAVER SEDIMVGYEN EFKMMLDQLA RGERELAVVS IVGMGGIGKT TLATKLYNDP CMMYRFDIRA
201: KATVSQEYCV RNVFLDLLSC ISDKPYDQLH DGQLADRLQK LLKGERYLVV IDDIWTTKAW DDIQICFPDF HNGSRILLTT RNVEVAEYAS SGKPPYHMRL
301: MNFDESWSLL YEKVFTKDSF SPEYEQLGKQ IALKCGGLPL AIVVIAGLLT KIDKALSEWQ SVAENVSSAV STDVGVQCMR VLAMSYHYLP HHLKPCFLYF
401: AIFPEDKLIF VNKLMILWET EGFLKVEEMK SIEEVAEKYL QDLIDRSLIS IESTTFDGKI KCCGIHDTTR ELCMMEARNM NFVNVLGSKN DQNPCVKSMQ
501: CLSKSRGRIS IHNKKEYVRC LNSEAHSVIL FGRFRCCMRE YLPFKLVRVL DLADNICLTF PREILYLIHL RHLALRIYPN VEQYLGSEED VLSSRVDIPT
601: SISNLCYLQS LVLYLPLVIN LRKHALILPS EILTMPQLRH LHLDRNYLRY HELTEKSLVM KNLHSLFGWN PSYCTASFFR LFPNLKELQV RGIPQDFHSH
701: KDLYDFRYLD HLEELAFCLP PQNNAYFLER RMCFQTRNPL VVEVVPSLIL PPPDAFPRNL KNLTFTGNFF LSWKDLSIVV GKLPKLELLE LTQGVCRGRE
801: WEVAEEGFPF LKFLLLKRSH IQYWRASCDH FPCLERLFLD SCRFLDSIPQ DFADITTLAL IDIRNCPESV GNSAKQIQQD IQDNYGGSIE VHIHQAFEET
901: SDDDDHDDDD DNDEEDEDDD EDDDEDEDDD EDEDEDDNDD EYDDDDLFLS NVIA

Best Arabidopsis Sequence Match ( AT1G53350.1 )
(BLAST)

001: MAEAVVSFGV EKLWELLSRE SARLNGIDEQ VDGLKRQLGR LQSLLKDADA KKNETERVRN FLEDVKDIVY DADDIIESFL LNELRGKEKG IKKQVRTLAC
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH

Arabidopsis Description

RPP8L2Probable disease resistance RPP8-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P0C8S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.