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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc04g009260.1.1 Tomato cytosol 85.92 85.51
PGSC0003DMT400082505 Potato cytosol 42.84 82.09
Solyc04g009660.2.1 Tomato cytosol 80.59 81.46
Solyc04g009290.1.1 Tomato cytosol 80.12 80.21
Solyc04g009250.1.1 Tomato cytosol 79.05 79.52
Solyc04g009690.1.1 Tomato cytosol 78.34 79.38
Solyc04g026110.2.1 Tomato cytosol 41.42 79.19
PGSC0003DMT400031142 Potato cytosol 76.21 77.22
Solyc04g009150.1.1 Tomato cytosol 77.04 77.13
Solyc04g009120.1.1 Tomato cytosol 57.75 75.31
Solyc04g009130.2.1 Tomato cytosol 67.93 74.16
Solyc04g009110.1.1 Tomato cytosol 73.37 73.55
Solyc12g010660.1.1 Tomato cytosol 11.95 40.56
Solyc12g006040.1.1 Tomato cytosol 14.2 39.22
CDX82995 Canola cytosol 13.85 37.5
AT3G46730.1 Thale cress cytosol 35.03 34.95
CDX82996 Canola cytosol 15.5 34.75
CDY18642 Canola cytosol, nucleus, peroxisome 15.15 34.69
Bra037123.1-P Field mustard cytosol 32.66 34.33
AT3G46530.1 Thale cress nucleus 33.61 34.01
AT3G46710.1 Thale cress cytosol 33.02 32.94
GSMUA_AchrUn_... Banana cytosol 10.41 32.12
TraesCS2D01G510300.1 Wheat cytosol 20.24 31.26
CDX68399 Canola cytosol 8.05 31.19
TraesCS7A01G562500.1 Wheat cytosol 20.47 31.17
TraesCS2D01G510100.1 Wheat cytosol 17.87 31.01
Os11t0633500-01 Rice cytosol 19.05 30.49
GSMUA_Achr7P20240_001 Banana mitochondrion 24.97 30.19
CDX81333 Canola nucleus 19.41 30.15
TraesCS2A01G477200.1 Wheat cytosol 23.79 29.73
GSMUA_Achr7P20230_001 Banana cytosol 31.24 29.73
CDX82994 Canola nucleus 15.86 29.71
TraesCS2B01G536900.1 Wheat cytosol 19.41 29.66
GSMUA_Achr7P20220_001 Banana cytosol 31.36 29.48
Solyc12g096920.1.1 Tomato extracellular 33.25 29.45
TraesCS6B01G447800.1 Wheat cytosol 18.46 29.32
TraesCS2D01G510000.1 Wheat cytosol 26.51 29.09
TraesCS7B01G500800.1 Wheat cytosol 24.5 28.71
TraesCS6A01G403900.1 Wheat plasma membrane, vacuole 25.68 28.67
CDX68397 Canola cytosol 8.28 28.34
GSMUA_AchrUn_... Banana cytosol 25.09 28.27
TraesCS7D01G548100.1 Wheat cytosol 29.47 28.01
TraesCS6B01G448100.1 Wheat cytosol 26.04 27.92
TraesCS7B01G501000.1 Wheat cytosol 28.88 27.92
TraesCS7B01G500700.1 Wheat cytosol 28.05 27.92
TraesCS7B01G423500.1 Wheat cytosol 28.52 27.83
TraesCS6D01G387400.1 Wheat cytosol 18.7 27.67
TraesCS7A01G561700.1 Wheat cytosol 28.4 27.65
Solyc07g009190.1.1 Tomato cytosol 15.86 27.63
TraesCS5D01G269100.1 Wheat cytosol 22.49 27.58
TraesCS1B01G336700.1 Wheat cytosol 26.15 27.56
TraesCS7B01G501900.1 Wheat cytosol 28.4 27.55
TraesCS7A01G562000.1 Wheat cytosol 28.52 27.54
TraesCS6B01G447900.1 Wheat cytosol 23.79 27.42
Solyc10g008220.2.1 Tomato endoplasmic reticulum 26.39 27.4
TraesCS7B01G501100.1 Wheat cytosol 28.17 27.32
TraesCS6B01G448300.2 Wheat cytosol, peroxisome, plasma membrane 25.56 27.31
TraesCS6A01G404000.1 Wheat cytosol 17.63 27.24
TraesCS7A01G561900.4 Wheat cytosol 29.59 27.23
TraesCS7B01G500900.1 Wheat cytosol 28.05 27.09
TraesCS1D01G324700.2 Wheat cytosol 27.69 26.9
TraesCS2B01G151600.2 Wheat cytosol 26.75 26.68
HORVU1Hr1G075170.1 Barley cytosol 27.46 26.67
Solyc10g047320.1.1 Tomato nucleus 27.93 26.67
TraesCS6D01G387500.1 Wheat cytosol, plastid 24.85 26.55
Solyc01g090430.2.1 Tomato extracellular 27.69 26.35
TraesCS1A01G323600.1 Wheat cytosol 27.1 26.29
Solyc10g008230.1.1 Tomato cytosol 24.14 26.02
HORVU2Hr1G022620.8 Barley cytosol 26.75 25.95
Solyc11g020100.1.1 Tomato cytosol, plasma membrane 19.17 25.92
OQU82378 Sorghum nucleus 25.68 25.89
Solyc10g008240.2.1 Tomato nucleus 27.22 25.87
TraesCS7B01G501200.1 Wheat cytosol 16.8 25.82
TraesCS5A01G261700.1 Wheat cytosol 26.63 25.54
TraesCS2A01G459100.1 Wheat plastid 23.79 25.28
Solyc01g087200.2.1 Tomato cytosol 26.27 25.23
Solyc08g005500.2.1 Tomato cytosol 21.66 25.03
TraesCS7B01G501300.1 Wheat cytosol 8.17 25.0
Solyc11g069020.1.1 Tomato cytosol 26.39 24.94
HORVU5Hr1G072540.26 Barley cytosol 25.92 24.91
TraesCS7B01G449900.2 Wheat cytosol 26.04 24.86
TraesCS6B01G448400.1 Wheat cytosol 24.85 24.76
TraesCS5A01G261600.1 Wheat cytosol 25.8 24.74
Solyc12g017800.1.1 Tomato cytosol 24.97 24.51
Solyc10g051050.1.1 Tomato cytosol 15.98 24.41
Solyc07g049700.1.1 Tomato cytosol 24.73 24.36
TraesCS2D01G481300.1 Wheat cytosol 27.34 24.14
TraesCS2B01G507100.1 Wheat cytosol 27.1 24.13
Solyc11g006630.1.1 Tomato cytosol, plastid 24.5 24.13
Solyc07g009180.1.1 Tomato nucleus 25.68 24.06
Solyc03g005660.2.1 Tomato cytosol 24.62 24.02
TraesCS2A01G129300.1 Wheat cytosol 7.1 24.0
TraesCS6B01G448000.1 Wheat cytosol 7.69 23.99
TraesCS5B01G259900.1 Wheat cytosol 26.27 23.9
Os03t0709200-01 Rice cytosol 27.1 23.88
Solyc08g074250.1.1 Tomato cytosol 24.38 23.65
Solyc05g008070.2.1 Tomato mitochondrion 23.2 23.45
Os10t0183000-01 Rice plasma membrane 24.73 23.38
Solyc11g006640.1.1 Tomato cytosol 23.55 23.36
Solyc04g011960.1.1 Tomato cytosol 24.26 23.09
Solyc04g011980.1.1 Tomato cytosol 24.02 23.04
Solyc04g012010.2.1 Tomato cytosol 22.6 23.01
Solyc04g011990.1.1 Tomato cytosol 24.5 22.97
Solyc02g027080.1.1 Tomato cytosol, plasma membrane 25.21 22.93
Solyc11g006530.1.1 Tomato cytosol, plastid 23.43 22.86
Solyc11g006520.1.1 Tomato cytosol, plastid 23.79 22.82
Solyc07g005770.2.1 Tomato cytosol 22.01 22.6
Solyc12g009450.1.1 Tomato mitochondrion 26.04 22.54
TraesCS2B01G507000.1 Wheat cytosol 19.41 22.43
Solyc06g062440.2.1 Tomato nucleus 17.99 22.19
Solyc12g009460.1.1 Tomato cytosol 22.6 22.11
Solyc04g015210.2.1 Tomato nucleus 24.02 22.02
Solyc12g017810.1.1 Tomato cytosol 5.68 21.92
Solyc04g007050.2.1 Tomato cytosol 21.18 21.88
Solyc04g007070.2.1 Tomato nucleus 22.49 21.86
Zm00001d045512_P001 Maize cytosol, mitochondrion 21.3 21.61
Solyc04g015220.2.1 Tomato cytosol 20.59 21.56
Solyc04g007030.2.1 Tomato endoplasmic reticulum 22.49 21.49
Solyc04g007060.2.1 Tomato nucleus 21.54 20.71
Protein Annotations
Gene3D:1.10.8.430Gene3D:3.40.50.300Gene3D:3.80.10.10MapMan:35.1GO:GO:0000166GO:GO:0003674
GO:GO:0005488GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006950GO:GO:0006952
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0043531
InterPro:IPR032675UniProt:K4BP80InterPro:LRR_dom_sfInterPro:NB-ARCInterPro:P-loop_NTPasePFAM:PF00931
PRINTS:PR00364PANTHER:PTHR43886PANTHER:PTHR43886:SF7InterPro:RX-like_CCSUPFAM:SSF52058SUPFAM:SSF52540
EnsemblPlantsGene:Solyc04g009240.1EnsemblPlants:Solyc04g009240.1.1UniParc:UPI00027657DB:::
Description
No Description!
Coordinates
chr4:-:2713465..2716002
Molecular Weight (calculated)
97536.0 Da
IEP (calculated)
7.689
GRAVY (calculated)
-0.142
Length
845 amino acids
Sequence
(BLAST)
001: MADAFVSFAV QKLGDFLIQE INLRLSLRDD IQWLRNELLF MQSFLRDAEL KQCGDQRVQQ WVFEINSIAN DAVAILETYS FEAGKRRPSR LKACACICSK
101: EKKFYNVAKE IKSLKKKIMD ISRKRETYGI TNIISGDEGP SNQVTTLRRT TSYVDDHDYI FVGLQDVVET LLAQLLKEEP CRTVLSIYGM GGLGKTTLAR
201: NLYRSPRIVN TFPTRAWICV SQEYNTMDLL KTIIKSIQGC TMGTLGLLEK MDERDLENHL RDLLKERKYL VVVDDIWQRE AWESLKRAFP DGEKGSRVII
301: TTRKEDVAER ADDRGFVHKL RFLSQEESWD LFCRKLLDVR AMVPEMESLA EDMVEKCRGL PLAIVVLSGL LSHKKGLNEW KKVKDHLWKN IKEDKFIEIS
401: NILSLSYNDL STALKQCFLY FGIFPEDKVV KVDNIIWLWM AEGFIPRRGV ERMEDVAEGF LNELIRRSLV QVANTFWEKV TECRVHDLLH DLAIQKALEV
501: NFFDIYDPTS HSISSSCIRH GIHNQGERYL SLDLSNLKLR SIMFYDPGFH KMSLINFRSV FQYLYVLYLD ILGATIPDVI GSLYHLKLLS LSCIHYLPSS
601: IGNLKNLQTL VVVAGAYSFQ LPPETTDLIN LRHLVVRCIK PLVHINKLTN LQVLQGIQCD QWKDIDPVDL VNLRELSMSG IDKSYSLNNI NSLKNLDTLK
701: LFCGFDESFP SLEFVIHCEK LQKLYLNGSI EKLPNLFSNS ITMMTLTDSK LTQDPMLILG MLPNLRNLQL KEAYFGKEII CSDNSFCQLQ FLQLEYLRNL
801: ETWRLGTNAM PLIKGLCIDH CPNLKEIPER MKRVELLKRT SKWSS
Best Arabidopsis Sequence Match ( AT3G46730.1 )
(BLAST)
001: MVDAVTGFVL NKIGGYLINE VLALMGVKDD LEELKTELTC IHGYLKDVEA REREDEVSKE WTKLVLDIAY DIEDVLDTYF LKLEERSLRR GLLRLTNKIG
101: KKRDAYNIVE DIRTLKRRIL DITRKRETFG IGSFNEPRGE NITNVRVRQL RRAPPVDQEE LVVGLEDDVK ILLVKLLSDN EKDKSYIISI FGMGGLGKTA
201: LARKLYNSGD VKRRFDCRAW TYVSQEYKTR DILIRIIRSL GIVSAEEMEK IKMFEEDEEL EVYLYGLLEG KNYMVVVDDV WDPDAWESLK RALPCDHRGS
301: KVIITTRIRA IAEGVEGTVY AHKLRFLTFE ESWTLFERKA FSNIEKVDED LQRTGKEMVK KCGGLPLAIV VLSGLLSRKR TNEWHEVCAS LWRRLKDNSI
401: HISTVFDLSF KEMRHELKLC FLYFSVFPED YEIKVEKLIH LLVAEGFIQE DEEMMMEDVA RCYIDELVDR SLVKAERIER GKVMSCRIHD LLRDLAIKKA
501: KELNFVNVYN EKQHSSDICR REVVHHLMND YYLCDRRVNK RMRSFLFIGE RRGFGYVNTT NLKLKLLRVL NMEGLLFVSK NISNTLPDVI GELIHLRYLG
601: IADTYVSILP ASISNLRFLQ TLDASGNDPF QYTTDLSKLT SLRHVIGKFV GECLIGEGVN LQTLRSISSY SWSKLNHELL RNLQDLEIYD HSKWVDQRRV
701: PLNFVSFSKP KNLRVLKLEM RNFKLSSESR TTIGLVDVNF PSLESLTLVG TTLEENSMPA LQKLPRLEDL VLKDCNYSGV KIMSISAQGF GRLKNLEMSM
801: ERRGHGLDEL RIEEEAMPSL IKLTVKGRLE LTKLMIPDRL KAFVRRN
Arabidopsis Description
RPP13L3Putative disease resistance RPP13-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9STE7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.