Factsheet for Solyc04g007070.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400041023	Potato	cytosol	85.27	88.53
PGSC0003DMT400069012	Potato	cytosol	56.16	87.3
Solyc04g007060.2.1	Tomato	nucleus	69.39	68.6
Solyc04g007030.2.1	Tomato	endoplasmic reticulum	64.9	63.8
Solyc01g090430.2.1	Tomato	extracellular	47.99	46.96
Solyc10g047320.1.1	Tomato	nucleus	46.95	46.1
Solyc04g015210.2.1	Tomato	nucleus	48.68	45.88
Solyc04g007050.2.1	Tomato	cytosol	39.82	42.3
Solyc03g005660.2.1	Tomato	cytosol	42.12	42.26
Solyc10g008220.2.1	Tomato	endoplasmic reticulum	35.67	38.08
Solyc12g006040.1.1	Tomato	cytosol	12.08	34.31
Solyc12g010660.1.1	Tomato	cytosol	9.32	32.53
Solyc07g009190.1.1	Tomato	cytosol	16.69	29.9
VIT_15s0045g00980.t01	Wine grape	cytosol	19.91	28.98
KRG88521	Soybean	cytosol	27.96	28.19
Solyc08g074250.1.1	Tomato	cytosol	28.19	28.13
KRH01598	Soybean	cytosol	28.54	28.05
Solyc11g020100.1.1	Tomato	cytosol, plasma membrane	20.14	28.0
Solyc01g087200.2.1	Tomato	cytosol	28.31	27.95
Solyc12g017800.1.1	Tomato	cytosol	27.62	27.87
Solyc11g006630.1.1	Tomato	cytosol, plastid	27.5	27.86
VIT_16s0022g01330.t01	Wine grape	cytosol	20.25	27.8
Solyc11g006530.1.1	Tomato	cytosol, plastid	27.39	27.48
Solyc12g017810.1.1	Tomato	cytosol	6.9	27.4
Solyc11g006640.1.1	Tomato	cytosol	26.81	27.35
Solyc10g008240.2.1	Tomato	nucleus	27.96	27.33
Solyc10g051050.1.1	Tomato	cytosol	17.38	27.31
Solyc06g062440.2.1	Tomato	nucleus	21.52	27.3
Solyc11g069020.1.1	Tomato	cytosol	27.96	27.18
VIT_15s0046g02800.t01	Wine grape	cytosol	21.4	27.11
Solyc04g011980.1.1	Tomato	cytosol	27.39	27.01
KRH01534	Soybean	cytosol	25.89	26.91
KRH17117	Soybean	cytosol	27.16	26.91
TraesCS2D01G510100.1	Wheat	cytosol	15.07	26.9
TraesCS7A01G562500.1	Wheat	cytosol	17.15	26.85
Solyc07g049700.1.1	Tomato	cytosol	26.47	26.81
KRG88520	Soybean	plastid	10.7	26.8
Solyc05g008070.2.1	Tomato	mitochondrion	25.78	26.79
Solyc04g015220.2.1	Tomato	cytosol	24.86	26.77
Solyc12g009460.1.1	Tomato	cytosol	26.58	26.74
Os11t0633500-01	Rice	cytosol	16.23	26.7
Solyc04g011960.1.1	Tomato	cytosol	27.16	26.58
KRH01595	Soybean	cytosol	27.39	26.56
Solyc02g027080.1.1	Tomato	cytosol, plasma membrane	28.19	26.37
KRH45220	Soybean	cytosol, extracellular, plastid	27.04	26.29
Solyc10g008230.1.1	Tomato	cytosol	23.36	25.89
TraesCS2B01G536900.1	Wheat	cytosol	16.46	25.86
Solyc08g005500.2.1	Tomato	cytosol	21.75	25.86
Solyc07g009180.1.1	Tomato	nucleus	26.81	25.83
VIT_15s0046g03660.t01	Wine grape	cytosol	24.97	25.8
Solyc04g011990.1.1	Tomato	cytosol	26.7	25.75
Solyc12g009450.1.1	Tomato	mitochondrion	28.88	25.72
Solyc04g026110.2.1	Tomato	cytosol	13.0	25.57
Solyc04g012010.2.1	Tomato	cytosol	24.4	25.54
Solyc11g006520.1.1	Tomato	cytosol, plastid	25.55	25.2
VIT_15s0045g01020.t01	Wine grape	cytosol	18.64	25.19
KRH23932	Soybean	cytosol	26.93	25.19
TraesCS2D01G510000.1	Wheat	cytosol	22.21	25.06
TraesCS7B01G501300.1	Wheat	cytosol	7.94	25.0
TraesCS2D01G510300.1	Wheat	cytosol	15.65	24.86
Solyc07g005770.2.1	Tomato	cytosol	23.48	24.79
VIT_15s0046g02750.t01	Wine grape	cytosol	26.7	24.79
VIT_15s0046g02730.t01	Wine grape	cytosol	26.24	24.78
TraesCS7A01G561700.1	Wheat	cytosol	24.74	24.77
GSMUA_Achr7P20240_001	Banana	mitochondrion	19.79	24.61
OQU82378	Sorghum	nucleus	23.59	24.46
TraesCS2B01G151600.2	Wheat	cytosol	23.82	24.44
TraesCS7B01G500700.1	Wheat	cytosol	23.71	24.26
TraesCS2A01G477200.1	Wheat	cytosol	18.87	24.26
VIT_15s0046g02820.t01	Wine grape	cytosol	26.35	24.26
GSMUA_Achr7P20230_001	Banana	cytosol	24.74	24.21
VIT_15s0045g00680.t01	Wine grape	cytosol	21.4	24.06
GSMUA_AchrUn_...	Banana	cytosol	20.71	24.0
Solyc04g009660.2.1	Tomato	cytosol	23.02	23.92
VIT_15s0045g01010.t01	Wine grape	cytosol	5.29	23.83
TraesCS6D01G387400.1	Wheat	cytosol	15.65	23.82
HORVU2Hr1G022620.8	Barley	cytosol	23.82	23.77
Solyc04g009120.1.1	Tomato	cytosol	17.72	23.77
TraesCS6B01G447800.1	Wheat	cytosol	14.5	23.68
TraesCS7A01G562000.1	Wheat	cytosol	23.82	23.66
TraesCS7B01G501100.1	Wheat	cytosol	23.71	23.65
VIT_00s0448g00020.t01	Wine grape	cytosol	25.66	23.65
TraesCS7B01G501200.1	Wheat	cytosol	14.96	23.64
GSMUA_Achr7P20220_001	Banana	cytosol	24.4	23.58
TraesCS7B01G501900.1	Wheat	cytosol	23.59	23.54
TraesCS7B01G423500.1	Wheat	cytosol	23.25	23.33
TraesCS7B01G500900.1	Wheat	cytosol	23.48	23.31
VIT_15s0046g02810.t01	Wine grape	cytosol	25.09	23.27
TraesCS1B01G336700.1	Wheat	cytosol	21.4	23.19
VIT_15s0045g00880.t01	Wine grape	cytosol	20.14	23.18
TraesCS7B01G501000.1	Wheat	cytosol	23.25	23.11
HORVU1Hr1G075170.1	Barley	cytosol	22.78	22.76
Solyc04g009150.1.1	Tomato	cytosol	22.09	22.75
TraesCS6A01G403900.1	Wheat	plasma membrane, vacuole	19.79	22.72
Solyc04g009110.1.1	Tomato	cytosol	21.98	22.66
TraesCS6D01G387500.1	Wheat	cytosol, plastid	20.6	22.63
Solyc04g009250.1.1	Tomato	cytosol	21.86	22.62
TraesCS6B01G448100.1	Wheat	cytosol	20.48	22.59
VIT_15s0045g00810.t01	Wine grape	cytosol	11.05	22.54
Solyc04g009290.1.1	Tomato	cytosol	21.86	22.51
TraesCS1A01G323600.1	Wheat	cytosol	22.55	22.5
TraesCS7D01G548100.1	Wheat	cytosol	23.02	22.5
Solyc04g009240.1.1	Tomato	cytosol	21.86	22.49
TraesCS2A01G129300.1	Wheat	cytosol	6.44	22.4
TraesCS7B01G500800.1	Wheat	cytosol	18.53	22.33
VIT_15s0045g00920.t01	Wine grape	cytosol	13.35	22.31
Solyc04g009690.1.1	Tomato	cytosol	21.4	22.3
TraesCS1D01G324700.2	Wheat	cytosol	22.32	22.3
Solyc04g009260.1.1	Tomato	cytosol	21.75	22.26
TraesCS7B01G449900.2	Wheat	cytosol	22.67	22.26
Solyc12g096920.1.1	Tomato	extracellular	24.4	22.22
TraesCS2A01G459100.1	Wheat	plastid	20.25	22.14
TraesCS6A01G404000.1	Wheat	cytosol	13.92	22.12
TraesCS6B01G448300.2	Wheat	cytosol, peroxisome, plasma membrane	20.02	22.0
TraesCS6B01G447900.1	Wheat	cytosol	18.53	21.96
VIT_15s0021g00130.t01	Wine grape	cytosol, nucleus, plastid	7.83	21.86
TraesCS7A01G561900.4	Wheat	cytosol	22.9	21.68
TraesCS2B01G507100.1	Wheat	cytosol	23.48	21.5
TraesCS6B01G448000.1	Wheat	cytosol	6.67	21.4
VIT_15s0045g00640.t01	Wine grape	cytosol	11.85	21.33
TraesCS2D01G481300.1	Wheat	cytosol	23.36	21.21
Solyc04g009130.2.1	Tomato	cytosol	18.87	21.19
GSMUA_AchrUn_...	Banana	cytosol	6.67	21.17
TraesCS6B01G448400.1	Wheat	cytosol	20.6	21.11
TraesCS2B01G507000.1	Wheat	cytosol	17.72	21.07
TraesCS5D01G269100.1	Wheat	cytosol	16.57	20.9
Os10t0183000-01	Rice	plasma membrane	21.29	20.69
TraesCS5A01G261600.1	Wheat	cytosol	20.6	20.32
TraesCS5A01G261700.1	Wheat	cytosol	20.6	20.32
HORVU5Hr1G072540.26	Barley	cytosol	20.48	20.25
Os03t0709200-01	Rice	cytosol	22.21	20.13
TraesCS5B01G259900.1	Wheat	cytosol	20.71	19.38
Zm00001d045512_P001	Maize	cytosol, mitochondrion	18.41	19.21

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531
InterPro:IPR032675	UniProt:K4BNL4	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931
PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF17	InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540
EnsemblPlantsGene:Solyc04g007070.2	EnsemblPlants:Solyc04g007070.2.1	UniParc:UPI00027667C4	SEG:seg	:	:

Description

No Description!

Coordinates

chr4:+:791050..796086

Molecular Weight (calculated)

98985.3 Da

IEP (calculated)

8.101

GRAVY (calculated)

-0.218

Length

869 amino acids

Sequence
(BLAST)

001: MADAVVNFLV ENLLQLLVEN VKLIGSAKGE LENLLKISQQ LKGFLDDAAK YGHTNSEQWK VLVEQIHKTV YRAEDAIDKF LVQAKLHQDK NIAERTFDWL
101: GNQIKVRNFA ADIKGIHDQI KDIRNNNQAL QATPVLELPK KGEVTQGPSL ENDAVVGFDD EANKVIKRLV EGPLDSVDII PVVGMPGLGK TTLARKIYND
201: PKLTYEFYSI VWVYVGQEYK AKDIYLRILK FFKKNIEDHL NDDVDTLAKA IGGYIKKGGR CLIVLDDVWE DDVIDHVMKV FAENKKGHRI MMTTRDTRLG
301: FFANKEPHKL KFLETEESFE LLVMRVFGRG GCPNELVVTG TEIARKCGGV PLVVVVIAGA LRGRSDKKDW ERVEKSVVQY LGEHTEDSCL KYVKMSYDYL
401: PREVQMCFLY CGVFPRGFDI PCWKLIRLWI AEGLIKPQPE STLQVEEIAE FYLTDLLNRN LVIIMQKRSD GQIKTCRLHD MLYQFCKKEA SNKWLFEEPD
501: QSKLDPDTCR RLCIQPSNLS DFLSTTPFAE HVRSFYCFSS KQKPINLSPN ETKLIHKAFP LMRVMDVESL RFIFSKDFKN LFHLRYIAIS GDFKSLPPTF
601: GKFWNLQTLI LNTSTLEPTL EVKADIWNLL QLRHLHTNIP AKLPSPTTTT GKPSCLQTLS MVTPESCEKE VLAKACNVKK LSIRGQMAAF LGAYKGGINN
701: LKELQCLEHL KLLNDVLFMN KALHLPSTFS ELVHTVKKLT LTNTRFTWSE AEKLGTLESL EVLKFKENAF TGDFWEPKSG FSALQVLWIE RSELESWEAS
801: VVNFPALRQL VLISCDKLDA VPLELADIPS LVEMRLDNTS KAVKSAKNVR DSKTSKGMKL KLSIYPPEN

Best Arabidopsis Sequence Match ( AT1G53350.1 )
(BLAST)

001: MAEAVVSFGV EKLWELLSRE SARLNGIDEQ VDGLKRQLGR LQSLLKDADA KKNETERVRN FLEDVKDIVY DADDIIESFL LNELRGKEKG IKKQVRTLAC
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH

Arabidopsis Description

RPP8L2Probable disease resistance RPP8-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P0C8S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.