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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92335 Canola cytosol 86.89 55.89
CDY38707 Canola cytosol, extracellular 2.51 51.85
CDY45136 Canola extracellular, golgi 29.98 41.13
CDY05425 Canola cytosol 33.93 36.49
CDY30895 Canola cytosol 45.06 36.17
CDY05420 Canola cytosol 35.55 35.42
CDX75041 Canola cytosol 47.22 34.07
CDX75047 Canola cytosol 41.65 33.53
CDX75044 Canola cytosol 35.37 33.5
CDY30905 Canola cytosol 26.21 32.74
CDY66057 Canola cytosol 43.63 32.66
CDY05433 Canola cytosol 37.7 31.39
CDX86272 Canola cytosol 16.88 31.02
CDY33605 Canola cytosol 46.32 30.39
CDY24492 Canola cytosol 42.55 29.26
CDX93129 Canola cytosol 48.65 28.77
CDX89618 Canola cytosol 48.65 28.56
CDY45054 Canola cytosol 42.01 28.02
CDX86269 Canola cytosol 31.24 27.97
GSMUA_AchrUn_... Banana cytosol 13.64 27.74
CDX86270 Canola cytosol 17.41 27.64
CDY03593 Canola cytosol 42.73 27.48
CDY66072 Canola cytosol 41.47 27.37
CDY28958 Canola cytosol 43.27 27.36
CDX84131 Canola cytosol 36.98 27.28
CDY48845 Canola nucleus 43.99 27.28
CDY65486 Canola mitochondrion 45.06 27.22
CDY15085 Canola extracellular, golgi 44.88 26.68
CDY19984 Canola cytosol 45.24 26.64
CDX85375 Canola cytosol 31.42 26.36
CDY66341 Canola nucleus 35.55 25.85
CDX82996 Canola cytosol 17.41 25.73
CDY45150 Canola endoplasmic reticulum 43.63 25.21
VIT_13s0067g00780.t01 Wine grape cytosol 33.93 25.2
CDY27293 Canola cytosol, mitochondrion 13.29 25.0
VIT_03s0038g01400.t01 Wine grape cytosol 38.96 24.94
TraesCS2D01G510100.1 Wheat cytosol 21.72 24.85
TraesCS6B01G447800.1 Wheat cytosol 23.52 24.62
KRH01327 Soybean cytosol 40.04 24.27
VIT_13s0067g00750.t01 Wine grape cytosol 16.34 24.14
TraesCS2A01G477200.1 Wheat cytosol 29.08 23.96
Os11t0633500-01 Rice cytosol 22.62 23.86
VIT_13s0067g00760.t01 Wine grape cytosol, plastid 33.57 23.67
TraesCS7A01G562500.1 Wheat cytosol 23.52 23.6
TraesCS2D01G510300.1 Wheat cytosol 23.16 23.58
VIT_13s0067g00790.t01 Wine grape cytosol 40.22 23.55
VIT_13s0067g00810.t01 Wine grape cytosol 38.96 23.48
CDY38710 Canola cytosol, mitochondrion 15.8 23.34
TraesCS2B01G536900.1 Wheat cytosol 22.98 23.15
CDY00088 Canola cytosol 26.57 22.84
VIT_13s0067g00740.t01 Wine grape extracellular 22.62 22.62
TraesCS7B01G500800.1 Wheat cytosol 28.73 22.19
KRH12365 Soybean endoplasmic reticulum 38.96 22.17
KRH37369 Soybean extracellular 30.88 22.16
VIT_09s0096g00930.t01 Wine grape cytosol, endoplasmic reticulum 9.34 21.85
TraesCS5D01G269100.1 Wheat cytosol 26.93 21.77
PGSC0003DMT400019327 Potato cytosol, extracellular 18.67 21.62
CDY05434 Canola cytosol 42.91 21.51
CDY18642 Canola cytosol, nucleus, peroxisome 14.18 21.41
TraesCS2D01G510000.1 Wheat cytosol 29.26 21.17
PGSC0003DMT400075439 Potato cytosol 35.55 20.71
CDX75042 Canola plastid 36.27 20.7
Solyc12g096920.1.1 Tomato extracellular 35.37 20.65
CDX68397 Canola cytosol 9.16 20.65
TraesCS6A01G403900.1 Wheat plasma membrane, vacuole 27.83 20.48
TraesCS1B01G336700.1 Wheat cytosol 29.08 20.2
CDY38706 Canola cytosol 14.54 20.0
TraesCS6B01G448300.2 Wheat cytosol, peroxisome, plasma membrane 28.37 19.97
TraesCS6D01G387400.1 Wheat cytosol 20.47 19.96
TraesCS6B01G448100.1 Wheat cytosol 28.19 19.92
GSMUA_Achr7P20240_001 Banana mitochondrion 24.96 19.89
GSMUA_Achr7P20230_001 Banana cytosol 31.42 19.71
TraesCS6B01G447900.1 Wheat cytosol 25.67 19.51
GSMUA_Achr7P20220_001 Banana cytosol 31.42 19.47
KRH45065 Soybean cytosol 27.11 19.24
TraesCS6D01G387500.1 Wheat cytosol, plastid 27.29 19.22
GSMUA_AchrUn_... Banana cytosol 25.85 19.2
TraesCS6A01G404000.1 Wheat cytosol 18.85 19.2
CDY05424 Canola cytosol 17.41 19.13
TraesCS7B01G500700.1 Wheat cytosol 29.08 19.08
TraesCS1D01G324700.2 Wheat cytosol 29.62 18.97
TraesCS7B01G501100.1 Wheat cytosol 29.62 18.94
TraesCS7A01G562000.1 Wheat cytosol 29.62 18.86
TraesCS7B01G501900.1 Wheat cytosol 29.44 18.83
TraesCS2B01G151600.2 Wheat cytosol 28.55 18.77
TraesCS1A01G323600.1 Wheat cytosol 29.08 18.6
TraesCS7B01G501000.1 Wheat cytosol 29.08 18.54
TraesCS7B01G500900.1 Wheat cytosol 29.08 18.51
TraesCS6B01G448000.1 Wheat cytosol 8.98 18.45
TraesCS7A01G561700.1 Wheat cytosol 28.55 18.32
TraesCS6B01G448400.1 Wheat cytosol 27.83 18.28
HORVU1Hr1G075170.1 Barley cytosol 28.55 18.28
CDX82995 Canola cytosol 10.23 18.27
OQU82378 Sorghum nucleus 27.47 18.26
TraesCS7B01G423500.1 Wheat cytosol 28.37 18.24
TraesCS7B01G449900.2 Wheat cytosol 28.9 18.19
HORVU2Hr1G022620.8 Barley cytosol 28.19 18.03
TraesCS7D01G548100.1 Wheat cytosol 28.73 18.0
TraesCS7A01G561900.4 Wheat cytosol 29.08 17.65
TraesCS2A01G129300.1 Wheat cytosol 7.9 17.6
CDX82994 Canola nucleus 14.0 17.29
Zm00001d045512_P001 Maize cytosol, mitochondrion 25.67 17.17
TraesCS2A01G459100.1 Wheat plastid 24.24 16.98
TraesCS5A01G261600.1 Wheat cytosol 26.75 16.91
TraesCS5A01G261700.1 Wheat cytosol 26.75 16.91
HORVU5Hr1G072540.26 Barley cytosol 26.57 16.84
TraesCS2B01G507100.1 Wheat cytosol 28.37 16.65
TraesCS2D01G481300.1 Wheat cytosol 28.55 16.61
Os10t0183000-01 Rice plasma membrane 26.57 16.55
TraesCS7B01G501200.1 Wheat cytosol 16.34 16.55
TraesCS5B01G259900.1 Wheat cytosol 27.29 16.36
VIT_13s0067g00830.t01 Wine grape cytosol 39.68 16.06
TraesCS7B01G501300.1 Wheat cytosol 7.9 15.94
TraesCS2B01G507000.1 Wheat cytosol 20.65 15.73
Os03t0709200-01 Rice cytosol 26.93 15.64
CDX68399 Canola cytosol 6.1 15.6
CDY60887 Canola cytosol 38.24 15.29
CDX81333 Canola nucleus 14.18 14.52
PGSC0003DMT400031120 Potato cytosol 5.39 9.8
CDY45137 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:1.10.8.430Gene3D:3.40.50.300Gene3D:3.80.10.10MapMan:35.1GO:A0A078GP52UniProt:A0A078GP52
EnsemblPlants:CDY26957ProteinID:CDY26957ProteinID:CDY26957.1ncoils:CoilGO:GO:0000166GO:GO:0003674
GO:GO:0005488GO:GO:0006950GO:GO:0006952GO:GO:0008150GO:GO:0043531EnsemblPlantsGene:GSBRNA2T00036710001
InterPro:IPR032675InterPro:LRR_dom_sfInterPro:NB-ARCInterPro:P-loop_NTPasePFAM:PF00931PRINTS:PR00364
PANTHER:PTHR43886PANTHER:PTHR43886:SF8InterPro:RX-like_CCSUPFAM:SSF52058SUPFAM:SSF52540UniParc:UPI0004EEA80E
SEG:seg:::::
Description
BnaC09g36260DBnaC09g36260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GP52]
Coordinates
chrLK032197:+:311734..314197
Molecular Weight (calculated)
63970.9 Da
IEP (calculated)
8.288
GRAVY (calculated)
-0.129
Length
557 amino acids
Sequence
(BLAST)
001: MADAVVAFGL HFLWELLIRE SNRLKAVQEQ ATELQNDLRR LKSFVKDAEA RARELGIKKH LKRVSCITFA HQKLSSQIRG ISRRISKVID NMETVEKLVG
101: HLVEENGVQV VSVCGMGGIG KTTLARQVFH HEKVRRRFNG FAWVFVSQEC RQKHRCLIVL DDVWSSAAWE LIKPAFPHRS GSKILLTSRN ESVGLHPDLR
201: CIIFRPRFLT HDDSWEVFQK IALIERNDIE FEVDDLTEEI QQMLKHCGGL PLAVKTRGGL LATKRTASEW RKVHNNIRSH IAGEIGENSG LIINVITLSY
301: EDLPSHLKHC FLYLAHFPED HEIQTETLFN YWVAEGIVMV GSEESTIVDV AEDYLENMVL VGKRNIVTSR IESCRLHDVV REVCLFKAKE ESFMQVFNAQ
401: SSVLDATSTR RVAVHLVDDD ENEPIQNLKA RALLYITRDF HPWILSTRSF RGLESLRVLD LFGAQFRRPK LHKSIGKLIH LRYLSLKETN LSVLPSSLGN
501: LELLVYLDLE IYETMVHIPD VLKKMKKLRY LMLPDELSNK TKLELSGLNF VGLLCLW
Best Arabidopsis Sequence Match ( AT1G53350.1 )
(BLAST)
001: MAEAVVSFGV EKLWELLSRE SARLNGIDEQ VDGLKRQLGR LQSLLKDADA KKNETERVRN FLEDVKDIVY DADDIIESFL LNELRGKEKG IKKQVRTLAC
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH
Arabidopsis Description
RPP8L2Probable disease resistance RPP8-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P0C8S1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.