Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86272 | Canola | cytosol | 69.8 | 80.86 |
| CDX85375 | Canola | cytosol | 74.07 | 39.16 |
| CDY27293 | Canola | cytosol, mitochondrion | 28.49 | 33.78 |
| CDX75047 | Canola | cytosol | 61.54 | 31.21 |
| CDY30905 | Canola | cytosol | 38.18 | 30.04 |
| VIT_09s0096g00930.t01 | Wine grape | cytosol, endoplasmic reticulum | 20.23 | 29.83 |
| CDY38710 | Canola | cytosol, mitochondrion | 31.62 | 29.44 |
| VIT_13s0067g00750.t01 | Wine grape | cytosol | 31.05 | 28.91 |
| CDX75041 | Canola | cytosol | 62.96 | 28.63 |
| CDX84131 | Canola | cytosol | 60.4 | 28.08 |
| Bra037448.1-P | Field mustard | cytosol | 67.52 | 27.85 |
| TraesCS6B01G448000.1 | Wheat | cytosol | 20.8 | 26.94 |
| CDX75044 | Canola | cytosol | 44.16 | 26.36 |
| CDX68399 | Canola | cytosol | 15.95 | 25.69 |
| CDY05425 | Canola | cytosol | 37.89 | 25.68 |
| CDX82995 | Canola | cytosol | 22.51 | 25.32 |
| TraesCS7B01G501300.1 | Wheat | cytosol | 19.66 | 25.0 |
| Bra037451.1-P | Field mustard | cytosol | 56.41 | 23.77 |
| TraesCS2A01G129300.1 | Wheat | cytosol | 16.81 | 23.6 |
| CDX75042 | Canola | plastid | 64.96 | 23.36 |
| CDY30895 | Canola | cytosol | 38.75 | 19.6 |
| TraesCS2D01G510100.1 | Wheat | cytosol | 27.07 | 19.51 |
| CDY66057 | Canola | cytosol | 39.32 | 18.55 |
| CDY26957 | Canola | cytosol | 27.64 | 17.41 |
| CDX92335 | Canola | cytosol | 41.88 | 16.97 |
| Os11t0633500-01 | Rice | cytosol | 25.36 | 16.86 |
| CDY15085 | Canola | extracellular, golgi | 44.44 | 16.65 |
| TraesCS2B01G536900.1 | Wheat | cytosol | 25.64 | 16.27 |
| CDY65486 | Canola | mitochondrion | 42.73 | 16.27 |
| CDY05420 | Canola | cytosol | 25.64 | 16.1 |
| CDY33605 | Canola | cytosol | 38.75 | 16.02 |
| TraesCS6B01G447800.1 | Wheat | cytosol | 24.22 | 15.98 |
| CDX89618 | Canola | cytosol | 42.45 | 15.7 |
| TraesCS7A01G562500.1 | Wheat | cytosol | 24.79 | 15.68 |
| CDX93129 | Canola | cytosol | 41.88 | 15.61 |
| CDY66341 | Canola | nucleus | 33.62 | 15.4 |
| CDY03593 | Canola | cytosol | 37.61 | 15.24 |
| PGSC0003DMT400019327 | Potato | cytosol, extracellular | 20.8 | 15.18 |
| CDY48845 | Canola | nucleus | 38.46 | 15.03 |
| VIT_13s0067g00780.t01 | Wine grape | cytosol | 31.05 | 14.53 |
| CDY28958 | Canola | cytosol | 36.18 | 14.42 |
| CDY45054 | Canola | cytosol | 33.62 | 14.13 |
| CDY24492 | Canola | cytosol | 32.48 | 14.07 |
| CDY19984 | Canola | cytosol | 37.32 | 13.85 |
| CDY45150 | Canola | endoplasmic reticulum | 37.61 | 13.69 |
| CDY66072 | Canola | cytosol | 32.48 | 13.51 |
| TraesCS2A01G477200.1 | Wheat | cytosol | 25.64 | 13.31 |
| TraesCS2D01G510000.1 | Wheat | cytosol | 27.35 | 12.47 |
| CDY05434 | Canola | cytosol | 39.03 | 12.33 |
| VIT_13s0067g00810.t01 | Wine grape | cytosol | 31.34 | 11.9 |
| TraesCS6A01G403900.1 | Wheat | plasma membrane, vacuole | 25.64 | 11.89 |
| TraesCS7B01G500800.1 | Wheat | cytosol | 24.22 | 11.79 |
| CDY18642 | Canola | cytosol, nucleus, peroxisome | 12.25 | 11.65 |
| CDY05424 | Canola | cytosol | 16.81 | 11.64 |
| GSMUA_AchrUn_... | Banana | cytosol | 8.83 | 11.31 |
| TraesCS6B01G448300.2 | Wheat | cytosol, peroxisome, plasma membrane | 25.36 | 11.25 |
| KRH37369 | Soybean | extracellular | 24.79 | 11.21 |
| VIT_13s0067g00790.t01 | Wine grape | cytosol | 30.2 | 11.15 |
| OQU82378 | Sorghum | nucleus | 26.5 | 11.1 |
| TraesCS6B01G448100.1 | Wheat | cytosol | 24.5 | 10.91 |
| CDY05433 | Canola | cytosol | 20.8 | 10.91 |
| TraesCS2D01G510300.1 | Wheat | cytosol | 16.81 | 10.79 |
| KRH01327 | Soybean | cytosol | 28.21 | 10.77 |
| TraesCS1B01G336700.1 | Wheat | cytosol | 24.5 | 10.72 |
| TraesCS7B01G501900.1 | Wheat | cytosol | 26.5 | 10.68 |
| TraesCS5D01G269100.1 | Wheat | cytosol | 20.8 | 10.6 |
| TraesCS6D01G387500.1 | Wheat | cytosol, plastid | 23.65 | 10.49 |
| TraesCS7B01G449900.2 | Wheat | cytosol | 26.21 | 10.4 |
| TraesCS6B01G448400.1 | Wheat | cytosol | 25.07 | 10.38 |
| TraesCS7D01G548100.1 | Wheat | cytosol | 26.21 | 10.35 |
| TraesCS7A01G561900.4 | Wheat | cytosol | 27.07 | 10.35 |
| TraesCS1A01G323600.1 | Wheat | cytosol | 25.64 | 10.33 |
| TraesCS7B01G501100.1 | Wheat | cytosol | 25.36 | 10.22 |
| TraesCS7A01G562000.1 | Wheat | cytosol | 25.07 | 10.06 |
| TraesCS7B01G500900.1 | Wheat | cytosol | 25.07 | 10.06 |
| TraesCS7B01G500700.1 | Wheat | cytosol | 23.93 | 9.89 |
| TraesCS7B01G423500.1 | Wheat | cytosol | 24.22 | 9.82 |
| TraesCS1D01G324700.2 | Wheat | cytosol | 24.22 | 9.77 |
| TraesCS7B01G501000.1 | Wheat | cytosol | 24.22 | 9.73 |
| TraesCS2B01G151600.2 | Wheat | cytosol | 23.36 | 9.68 |
| HORVU1Hr1G075170.1 | Barley | cytosol | 23.65 | 9.54 |
| GSMUA_AchrUn_... | Banana | cytosol | 20.23 | 9.47 |
| HORVU2Hr1G022620.8 | Barley | cytosol | 23.36 | 9.41 |
| TraesCS7A01G561700.1 | Wheat | cytosol | 23.08 | 9.33 |
| KRH12365 | Soybean | endoplasmic reticulum | 25.93 | 9.3 |
| GSMUA_Achr7P20230_001 | Banana | cytosol | 22.79 | 9.01 |
| CDX81333 | Canola | nucleus | 13.68 | 8.82 |
| TraesCS2A01G459100.1 | Wheat | plastid | 19.94 | 8.81 |
| KRH45065 | Soybean | cytosol | 19.66 | 8.79 |
| TraesCS6B01G447900.1 | Wheat | cytosol | 18.23 | 8.73 |
| Solyc12g096920.1.1 | Tomato | extracellular | 23.65 | 8.7 |
| PGSC0003DMT400075439 | Potato | cytosol | 23.65 | 8.68 |
| VIT_03s0038g01400.t01 | Wine grape | cytosol | 21.37 | 8.62 |
| GSMUA_Achr7P20220_001 | Banana | cytosol | 21.94 | 8.57 |
| TraesCS5A01G261700.1 | Wheat | cytosol | 20.51 | 8.17 |
| HORVU5Hr1G072540.26 | Barley | cytosol | 20.23 | 8.08 |
| TraesCS2B01G507100.1 | Wheat | cytosol | 21.65 | 8.01 |
| TraesCS2D01G481300.1 | Wheat | cytosol | 21.65 | 7.94 |
| TraesCS5A01G261600.1 | Wheat | cytosol | 19.66 | 7.83 |
| Os10t0183000-01 | Rice | plasma membrane | 19.94 | 7.83 |
| Os03t0709200-01 | Rice | cytosol | 21.08 | 7.72 |
| TraesCS5B01G259900.1 | Wheat | cytosol | 20.23 | 7.64 |
| VIT_13s0067g00830.t01 | Wine grape | cytosol | 29.34 | 7.49 |
| VIT_13s0067g00760.t01 | Wine grape | cytosol, plastid | 15.1 | 6.71 |
| Zm00001d045512_P001 | Maize | cytosol, mitochondrion | 14.53 | 6.12 |
| CDY60887 | Canola | cytosol | 21.37 | 5.38 |
| GSMUA_Achr7P20240_001 | Banana | mitochondrion | 9.97 | 5.01 |
| TraesCS6A01G404000.1 | Wheat | cytosol | 4.84 | 3.11 |
| TraesCS6D01G387400.1 | Wheat | cytosol | 4.84 | 2.98 |
| TraesCS2B01G507000.1 | Wheat | cytosol | 5.41 | 2.6 |
| CDY45136 | Canola | extracellular, golgi | 1.42 | 1.23 |
| CDX68397 | Canola | cytosol | 0.57 | 0.81 |
| CDX86269 | Canola | cytosol | 1.14 | 0.64 |
| PGSC0003DMT400031120 | Potato | cytosol | 0.28 | 0.33 |
| TraesCS7B01G501200.1 | Wheat | cytosol | 0.28 | 0.18 |
| VIT_13s0067g00740.t01 | Wine grape | extracellular | 0.28 | 0.18 |
| CDY00088 | Canola | cytosol | 0.28 | 0.15 |
| CDX82994 | Canola | nucleus | 0.0 | 0.0 |
| CDX82996 | Canola | cytosol | 0.0 | 0.0 |
| CDY38706 | Canola | cytosol | 0.0 | 0.0 |
| CDY38707 | Canola | cytosol, extracellular | 0.0 | 0.0 |
| CDY45137 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX86270 | EnsemblPlantsGene:GSBRNA2T00144379001 | Gene3D:3.40.50.300 | GO:A0A078DAJ9 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:NB-ARC | InterPro:P-loop_NTPase | InterPro:RX-like_CC | ncoils:Coil |
| PANTHER:PTHR43886 | PANTHER:PTHR43886:SF8 | PFAM:PF00931 | ProteinID:CDX86270 | ProteinID:CDX86270.1 | SEG:seg |
| SUPFAM:SSF52540 | UniParc:UPI0004EED556 | MapMan:35.1 | : | : | : |
Description
BnaA06g29870D
Coordinates
chrLK031845:-:705134..706400
Molecular Weight (calculated)
40650.3 Da
IEP (calculated)
6.441
GRAVY (calculated)
-0.371
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLESTLSLP LISLLQRTSL RELQSCFIKV MAEVVVSAMV EGVVSFGVEK LWDLLSRETE RLQGVHEHVA GLKRRMRTLQ SLLKDADAKK HENKEVRNFL
101: EDVKDIVYDA EDIIESFLLK ESSGNEKGIK RRVKALSCFL VERRDISIDI EGITKRMSEV VAEMQSFGIK EIMYDGRSLE IRQTFPKSSE KGLVGVEESV
201: EELVGHLVKN DNIQVVSISG MGGIGKTTLA RQVFHHDIVR RHFDGFAWVC VSKEFRRKDI WQKILQDLKR HGKDIKQVDQ NEVQAIKQMD ENELQAIKQM
301: DENELQEKLF LLLGTRRHLI VLDDVWKNED WDRIKDVFPQ ERGKLFNLYI T
101: EDVKDIVYDA EDIIESFLLK ESSGNEKGIK RRVKALSCFL VERRDISIDI EGITKRMSEV VAEMQSFGIK EIMYDGRSLE IRQTFPKSSE KGLVGVEESV
201: EELVGHLVKN DNIQVVSISG MGGIGKTTLA RQVFHHDIVR RHFDGFAWVC VSKEFRRKDI WQKILQDLKR HGKDIKQVDQ NEVQAIKQMD ENELQAIKQM
301: DENELQEKLF LLLGTRRHLI VLDDVWKNED WDRIKDVFPQ ERGKLFNLYI T
001: MAEAVVSFGV EKLWELLSRE SARLNGIDEQ VDGLKRQLGR LQSLLKDADA KKNETERVRN FLEDVKDIVY DADDIIESFL LNELRGKEKG IKKQVRTLAC
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH
Arabidopsis Description
RPP8L2Probable disease resistance RPP8-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P0C8S1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.