Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38710 | Canola | cytosol, mitochondrion | 42.23 | 33.16 |
| CDX86272 | Canola | cytosol | 32.43 | 31.68 |
| CDX86270 | Canola | cytosol | 33.78 | 28.49 |
| CDY30905 | Canola | cytosol | 39.86 | 26.46 |
| CDY05425 | Canola | cytosol | 37.5 | 21.43 |
| VIT_13s0067g00750.t01 | Wine grape | cytosol | 26.01 | 20.42 |
| TraesCS6B01G448000.1 | Wheat | cytosol | 18.24 | 19.93 |
| CDX82995 | Canola | cytosol | 20.61 | 19.55 |
| TraesCS7B01G501300.1 | Wheat | cytosol | 17.57 | 18.84 |
| TraesCS2A01G129300.1 | Wheat | cytosol | 15.88 | 18.8 |
| VIT_09s0096g00930.t01 | Wine grape | cytosol, endoplasmic reticulum | 14.86 | 18.49 |
| CDX68399 | Canola | cytosol | 12.5 | 16.97 |
| CDX75044 | Canola | cytosol | 32.43 | 16.33 |
| CDY30895 | Canola | cytosol | 38.18 | 16.28 |
| CDX75047 | Canola | cytosol | 37.16 | 15.9 |
| TraesCS2D01G510100.1 | Wheat | cytosol | 25.68 | 15.61 |
| CDX85375 | Canola | cytosol | 33.45 | 14.91 |
| CDX75041 | Canola | cytosol | 37.5 | 14.38 |
| CDX84131 | Canola | cytosol | 36.49 | 14.3 |
| CDY05420 | Canola | cytosol | 26.69 | 14.13 |
| CDX89618 | Canola | cytosol | 43.92 | 13.7 |
| CDX93129 | Canola | cytosol | 43.58 | 13.69 |
| CDY05424 | Canola | cytosol | 23.31 | 13.61 |
| TraesCS2B01G536900.1 | Wheat | cytosol | 25.34 | 13.56 |
| CDY33605 | Canola | cytosol | 38.18 | 13.31 |
| CDY26957 | Canola | cytosol | 25.0 | 13.29 |
| CDY66341 | Canola | nucleus | 33.78 | 13.05 |
| TraesCS7A01G562500.1 | Wheat | cytosol | 24.32 | 12.97 |
| CDY24492 | Canola | cytosol | 35.47 | 12.96 |
| PGSC0003DMT400019327 | Potato | cytosol, extracellular | 20.95 | 12.89 |
| Os11t0633500-01 | Rice | cytosol | 22.64 | 12.69 |
| TraesCS6B01G447800.1 | Wheat | cytosol | 22.64 | 12.59 |
| CDX92335 | Canola | cytosol | 35.81 | 12.24 |
| CDY18642 | Canola | cytosol, nucleus, peroxisome | 15.2 | 12.2 |
| CDY28958 | Canola | cytosol | 35.47 | 11.92 |
| CDY48845 | Canola | nucleus | 36.15 | 11.92 |
| CDY45150 | Canola | endoplasmic reticulum | 38.51 | 11.83 |
| VIT_13s0067g00780.t01 | Wine grape | cytosol | 29.73 | 11.73 |
| CDY66072 | Canola | cytosol | 33.45 | 11.73 |
| GSMUA_AchrUn_... | Banana | cytosol | 10.81 | 11.68 |
| CDY05433 | Canola | cytosol | 26.35 | 11.66 |
| CDY19984 | Canola | cytosol | 35.47 | 11.1 |
| CDY03593 | Canola | cytosol | 32.43 | 11.09 |
| CDX75042 | Canola | plastid | 35.14 | 10.66 |
| CDY05434 | Canola | cytosol | 37.84 | 10.08 |
| VIT_13s0067g00810.t01 | Wine grape | cytosol | 31.42 | 10.06 |
| TraesCS2D01G510300.1 | Wheat | cytosol | 18.58 | 10.05 |
| TraesCS2D01G510000.1 | Wheat | cytosol | 26.01 | 10.0 |
| CDY66057 | Canola | cytosol | 24.66 | 9.81 |
| TraesCS2A01G477200.1 | Wheat | cytosol | 22.3 | 9.76 |
| CDY45054 | Canola | cytosol | 27.03 | 9.58 |
| CDY65486 | Canola | mitochondrion | 29.73 | 9.54 |
| CDY15085 | Canola | extracellular, golgi | 30.07 | 9.5 |
| KRH37369 | Soybean | extracellular | 23.99 | 9.15 |
| TraesCS5D01G269100.1 | Wheat | cytosol | 20.95 | 9.0 |
| TraesCS6A01G403900.1 | Wheat | plasma membrane, vacuole | 22.97 | 8.98 |
| KRH01327 | Soybean | cytosol | 27.7 | 8.92 |
| TraesCS7B01G500800.1 | Wheat | cytosol | 21.62 | 8.88 |
| VIT_13s0067g00790.t01 | Wine grape | cytosol | 28.04 | 8.73 |
| TraesCS7B01G501900.1 | Wheat | cytosol | 25.68 | 8.73 |
| TraesCS6B01G448100.1 | Wheat | cytosol | 22.97 | 8.63 |
| TraesCS7B01G501100.1 | Wheat | cytosol | 25.34 | 8.61 |
| TraesCS7B01G500900.1 | Wheat | cytosol | 25.34 | 8.57 |
| TraesCS7A01G562000.1 | Wheat | cytosol | 25.0 | 8.46 |
| TraesCS6B01G448300.2 | Wheat | cytosol, peroxisome, plasma membrane | 22.3 | 8.34 |
| TraesCS1B01G336700.1 | Wheat | cytosol | 22.3 | 8.23 |
| TraesCS7D01G548100.1 | Wheat | cytosol | 24.66 | 8.21 |
| PGSC0003DMT400075439 | Potato | cytosol | 26.35 | 8.16 |
| TraesCS6B01G448400.1 | Wheat | cytosol | 23.31 | 8.14 |
| OQU82378 | Sorghum | nucleus | 22.97 | 8.11 |
| TraesCS6D01G387500.1 | Wheat | cytosol, plastid | 21.62 | 8.09 |
| CDX81333 | Canola | nucleus | 14.86 | 8.09 |
| TraesCS7B01G500700.1 | Wheat | cytosol | 22.97 | 8.01 |
| TraesCS7B01G423500.1 | Wheat | cytosol | 23.31 | 7.97 |
| Solyc12g096920.1.1 | Tomato | extracellular | 25.68 | 7.97 |
| TraesCS1A01G323600.1 | Wheat | cytosol | 23.31 | 7.92 |
| TraesCS2B01G151600.2 | Wheat | cytosol | 22.64 | 7.91 |
| KRH12365 | Soybean | endoplasmic reticulum | 26.01 | 7.87 |
| TraesCS7A01G561900.4 | Wheat | cytosol | 24.32 | 7.84 |
| TraesCS7B01G449900.2 | Wheat | cytosol | 23.31 | 7.8 |
| TraesCS6B01G447900.1 | Wheat | cytosol | 19.26 | 7.78 |
| HORVU1Hr1G075170.1 | Barley | cytosol | 22.64 | 7.7 |
| TraesCS1D01G324700.2 | Wheat | cytosol | 22.64 | 7.7 |
| TraesCS7B01G501000.1 | Wheat | cytosol | 22.64 | 7.67 |
| KRH45065 | Soybean | cytosol | 20.27 | 7.64 |
| TraesCS7A01G561700.1 | Wheat | cytosol | 21.96 | 7.49 |
| HORVU2Hr1G022620.8 | Barley | cytosol | 21.96 | 7.46 |
| GSMUA_AchrUn_... | Banana | cytosol | 18.58 | 7.33 |
| VIT_03s0038g01400.t01 | Wine grape | cytosol | 21.28 | 7.24 |
| GSMUA_Achr7P20220_001 | Banana | cytosol | 21.96 | 7.23 |
| GSMUA_Achr7P20230_001 | Banana | cytosol | 21.62 | 7.21 |
| HORVU5Hr1G072540.26 | Barley | cytosol | 20.95 | 7.05 |
| TraesCS5A01G261700.1 | Wheat | cytosol | 20.61 | 6.92 |
| TraesCS5A01G261600.1 | Wheat | cytosol | 19.93 | 6.7 |
| TraesCS5B01G259900.1 | Wheat | cytosol | 20.95 | 6.67 |
| TraesCS2A01G459100.1 | Wheat | plastid | 17.91 | 6.67 |
| Os03t0709200-01 | Rice | cytosol | 21.28 | 6.57 |
| TraesCS2B01G507100.1 | Wheat | cytosol | 20.61 | 6.43 |
| Os10t0183000-01 | Rice | plasma membrane | 19.26 | 6.38 |
| TraesCS2D01G481300.1 | Wheat | cytosol | 20.27 | 6.27 |
| CDY60887 | Canola | cytosol | 29.05 | 6.17 |
| VIT_13s0067g00830.t01 | Wine grape | cytosol | 28.38 | 6.1 |
| Zm00001d045512_P001 | Maize | cytosol, mitochondrion | 16.55 | 5.88 |
| VIT_13s0067g00760.t01 | Wine grape | cytosol, plastid | 15.54 | 5.82 |
| GSMUA_Achr7P20240_001 | Banana | mitochondrion | 11.82 | 5.01 |
| CDY38707 | Canola | cytosol, extracellular | 0.34 | 3.7 |
| TraesCS2B01G507000.1 | Wheat | cytosol | 7.09 | 2.87 |
| TraesCS6D01G387400.1 | Wheat | cytosol | 5.41 | 2.8 |
| TraesCS6A01G404000.1 | Wheat | cytosol | 5.07 | 2.74 |
| CDX68397 | Canola | cytosol | 2.03 | 2.43 |
| CDX82996 | Canola | cytosol | 2.7 | 2.12 |
| CDY45136 | Canola | extracellular, golgi | 1.69 | 1.23 |
| CDX86269 | Canola | cytosol | 2.36 | 1.13 |
| CDX82994 | Canola | nucleus | 1.69 | 1.11 |
| TraesCS7B01G501200.1 | Wheat | cytosol | 1.69 | 0.91 |
| VIT_13s0067g00740.t01 | Wine grape | extracellular | 1.69 | 0.9 |
| CDY00088 | Canola | cytosol | 1.69 | 0.77 |
| CDY38706 | Canola | cytosol | 0.68 | 0.49 |
| CDY45137 | Canola | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400031120 | Potato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY27293 | EnsemblPlantsGene:GSBRNA2T00037200001 | Gene3D:3.40.50.300 | GO:A0A078GRM1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:NB-ARC | InterPro:P-loop_NTPase | PANTHER:PTHR43886 | PANTHER:PTHR43886:SF8 |
| PFAM:PF00931 | PRINTS:PR00364 | ProteinID:CDY27293 | ProteinID:CDY27293.1 | SUPFAM:SSF52540 | UniParc:UPI0004EE38C5 |
| UniProt:A0A078GRM1 | MapMan:35.1 | : | : | : | : |
Description
BnaC04g18730DBnaC04g18730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GRM1]
Coordinates
chrLK032202:-:337771..343879
Molecular Weight (calculated)
34589.7 Da
IEP (calculated)
9.584
GRAVY (calculated)
-0.542
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAGLRNWRG RGQTFSRRWL KLRGISEKLT AETLLLFGVE KLWDLIVRES ERLKGVDEQF TELKKLGKAS GIRKHMRRLA FSIVDCMEHA TEIRGSSKRI
101: SKVILSMQSF GLQQSISGDG YSQPLQERRE MQKTFSNDNE NNLVGLEKNV KTLVHYLVEE DCIRVISITR MGGIGKTTIA RQVFNHETVK NHFEGLAWVC
201: VSQQFTRKDV WRTILRNLQP NYEEITEDEI QNKLFGLMET QNYLIVHDDI WKEEDWDRIK PFFFIKMGVS QTYGRTQTNL QVEVQPTDRP SLRVCK
101: SKVILSMQSF GLQQSISGDG YSQPLQERRE MQKTFSNDNE NNLVGLEKNV KTLVHYLVEE DCIRVISITR MGGIGKTTIA RQVFNHETVK NHFEGLAWVC
201: VSQQFTRKDV WRTILRNLQP NYEEITEDEI QNKLFGLMET QNYLIVHDDI WKEEDWDRIK PFFFIKMGVS QTYGRTQTNL QVEVQPTDRP SLRVCK
001: MAEAVVSFGV EKLWELLSRE SARLNGIDEQ VDGLKRQLGR LQSLLKDADA KKNETERVRN FLEDVKDIVY DADDIIESFL LNELRGKEKG IKKQVRTLAC
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH
Arabidopsis Description
RPP8L2Probable disease resistance RPP8-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P0C8S1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.