Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86270 | Canola | cytosol | 80.86 | 69.8 |
| CDX85375 | Canola | cytosol | 81.19 | 37.05 |
| CDY27293 | Canola | cytosol, mitochondrion | 31.68 | 32.43 |
| VIT_09s0096g00930.t01 | Wine grape | cytosol, endoplasmic reticulum | 24.09 | 30.67 |
| CDY30905 | Canola | cytosol | 44.55 | 30.27 |
| CDY38710 | Canola | cytosol, mitochondrion | 37.62 | 30.24 |
| CDX75047 | Canola | cytosol | 67.99 | 29.77 |
| CDX75041 | Canola | cytosol | 70.63 | 27.72 |
| VIT_13s0067g00750.t01 | Wine grape | cytosol | 33.99 | 27.32 |
| CDX84131 | Canola | cytosol | 67.0 | 26.89 |
| Bra037453.1-P | Field mustard | nucleus | 96.04 | 26.8 |
| CDX68399 | Canola | cytosol | 18.48 | 25.69 |
| CDX75044 | Canola | cytosol | 49.51 | 25.51 |
| TraesCS6B01G448000.1 | Wheat | cytosol | 22.77 | 25.46 |
| CDX82995 | Canola | cytosol | 25.41 | 24.68 |
| CDY05425 | Canola | cytosol | 41.91 | 24.52 |
| TraesCS7B01G501300.1 | Wheat | cytosol | 21.78 | 23.91 |
| TraesCS2A01G129300.1 | Wheat | cytosol | 18.15 | 22.0 |
| CDX75042 | Canola | plastid | 68.65 | 21.31 |
| CDY30895 | Canola | cytosol | 41.91 | 18.3 |
| TraesCS2D01G510100.1 | Wheat | cytosol | 28.38 | 17.66 |
| CDY26957 | Canola | cytosol | 31.02 | 16.88 |
| CDY15085 | Canola | extracellular, golgi | 51.82 | 16.76 |
| CDX92335 | Canola | cytosol | 47.85 | 16.74 |
| CDY65486 | Canola | mitochondrion | 50.49 | 16.59 |
| CDY66341 | Canola | nucleus | 39.27 | 15.54 |
| CDY05420 | Canola | cytosol | 28.05 | 15.21 |
| CDY66057 | Canola | cytosol | 37.29 | 15.19 |
| CDX93129 | Canola | cytosol | 47.19 | 15.18 |
| CDY48845 | Canola | nucleus | 44.88 | 15.14 |
| CDY33605 | Canola | cytosol | 42.24 | 15.08 |
| CDX89618 | Canola | cytosol | 47.19 | 15.07 |
| CDY28958 | Canola | cytosol | 43.23 | 14.87 |
| TraesCS6B01G447800.1 | Wheat | cytosol | 26.07 | 14.85 |
| Os11t0633500-01 | Rice | cytosol | 25.74 | 14.77 |
| TraesCS2B01G536900.1 | Wheat | cytosol | 26.73 | 14.65 |
| TraesCS7A01G562500.1 | Wheat | cytosol | 26.73 | 14.59 |
| CDY03593 | Canola | cytosol | 41.58 | 14.55 |
| VIT_13s0067g00780.t01 | Wine grape | cytosol | 34.65 | 14.0 |
| PGSC0003DMT400019327 | Potato | cytosol, extracellular | 22.11 | 13.93 |
| CDY45054 | Canola | cytosol | 36.63 | 13.29 |
| CDY24492 | Canola | cytosol | 35.31 | 13.21 |
| CDY19984 | Canola | cytosol | 40.92 | 13.11 |
| CDY45150 | Canola | endoplasmic reticulum | 41.25 | 12.97 |
| CDY66072 | Canola | cytosol | 34.98 | 12.56 |
| TraesCS2A01G477200.1 | Wheat | cytosol | 27.06 | 12.13 |
| CDY18642 | Canola | cytosol, nucleus, peroxisome | 14.52 | 11.92 |
| CDY05434 | Canola | cytosol | 42.9 | 11.7 |
| CDY05424 | Canola | cytosol | 19.47 | 11.64 |
| VIT_13s0067g00810.t01 | Wine grape | cytosol | 34.98 | 11.47 |
| TraesCS2D01G510000.1 | Wheat | cytosol | 28.38 | 11.17 |
| TraesCS6A01G403900.1 | Wheat | plasma membrane, vacuole | 27.06 | 10.83 |
| KRH37369 | Soybean | extracellular | 27.39 | 10.7 |
| TraesCS7B01G500800.1 | Wheat | cytosol | 25.41 | 10.68 |
| VIT_13s0067g00790.t01 | Wine grape | cytosol | 32.67 | 10.41 |
| CDY05433 | Canola | cytosol | 22.44 | 10.16 |
| TraesCS5D01G269100.1 | Wheat | cytosol | 23.1 | 10.16 |
| KRH01327 | Soybean | cytosol | 30.69 | 10.12 |
| TraesCS6B01G448300.2 | Wheat | cytosol, peroxisome, plasma membrane | 26.4 | 10.11 |
| TraesCS6B01G448100.1 | Wheat | cytosol | 26.07 | 10.03 |
| GSMUA_AchrUn_... | Banana | cytosol | 8.91 | 9.85 |
| TraesCS1B01G336700.1 | Wheat | cytosol | 26.07 | 9.85 |
| OQU82378 | Sorghum | nucleus | 27.06 | 9.79 |
| TraesCS7B01G501900.1 | Wheat | cytosol | 28.05 | 9.76 |
| TraesCS6B01G448400.1 | Wheat | cytosol | 27.06 | 9.67 |
| TraesCS2D01G510300.1 | Wheat | cytosol | 17.16 | 9.51 |
| TraesCS7B01G449900.2 | Wheat | cytosol | 27.72 | 9.49 |
| GSMUA_AchrUn_... | Banana | cytosol | 23.43 | 9.47 |
| TraesCS7B01G501100.1 | Wheat | cytosol | 27.06 | 9.41 |
| TraesCS6D01G387500.1 | Wheat | cytosol, plastid | 24.42 | 9.36 |
| TraesCS1A01G323600.1 | Wheat | cytosol | 26.73 | 9.3 |
| TraesCS7A01G562000.1 | Wheat | cytosol | 26.73 | 9.26 |
| TraesCS7B01G500900.1 | Wheat | cytosol | 26.73 | 9.26 |
| TraesCS7B01G423500.1 | Wheat | cytosol | 26.4 | 9.24 |
| CDX81333 | Canola | nucleus | 16.5 | 9.19 |
| TraesCS7D01G548100.1 | Wheat | cytosol | 26.73 | 9.11 |
| TraesCS7B01G500700.1 | Wheat | cytosol | 25.41 | 9.07 |
| TraesCS7A01G561900.4 | Wheat | cytosol | 27.39 | 9.04 |
| KRH12365 | Soybean | endoplasmic reticulum | 29.04 | 8.99 |
| TraesCS1D01G324700.2 | Wheat | cytosol | 25.74 | 8.97 |
| TraesCS7B01G501000.1 | Wheat | cytosol | 25.41 | 8.81 |
| PGSC0003DMT400075439 | Potato | cytosol | 27.72 | 8.79 |
| TraesCS7A01G561700.1 | Wheat | cytosol | 25.08 | 8.76 |
| Solyc12g096920.1.1 | Tomato | extracellular | 27.39 | 8.7 |
| TraesCS2B01G151600.2 | Wheat | cytosol | 24.09 | 8.62 |
| GSMUA_Achr7P20230_001 | Banana | cytosol | 25.08 | 8.56 |
| HORVU1Hr1G075170.1 | Barley | cytosol | 24.42 | 8.51 |
| HORVU2Hr1G022620.8 | Barley | cytosol | 24.42 | 8.5 |
| TraesCS2A01G459100.1 | Wheat | plastid | 22.11 | 8.43 |
| KRH45065 | Soybean | cytosol | 21.78 | 8.41 |
| GSMUA_Achr7P20220_001 | Banana | cytosol | 24.42 | 8.23 |
| VIT_03s0038g01400.t01 | Wine grape | cytosol | 23.1 | 8.05 |
| TraesCS6B01G447900.1 | Wheat | cytosol | 18.81 | 7.78 |
| HORVU5Hr1G072540.26 | Barley | cytosol | 22.44 | 7.74 |
| TraesCS5A01G261600.1 | Wheat | cytosol | 22.44 | 7.72 |
| TraesCS5A01G261700.1 | Wheat | cytosol | 22.44 | 7.72 |
| TraesCS2B01G507100.1 | Wheat | cytosol | 24.09 | 7.69 |
| TraesCS2D01G481300.1 | Wheat | cytosol | 24.09 | 7.63 |
| VIT_13s0067g00830.t01 | Wine grape | cytosol | 33.66 | 7.41 |
| TraesCS5B01G259900.1 | Wheat | cytosol | 22.44 | 7.32 |
| Os03t0709200-01 | Rice | cytosol | 23.1 | 7.3 |
| Os10t0183000-01 | Rice | plasma membrane | 21.45 | 7.27 |
| Zm00001d045512_P001 | Maize | cytosol, mitochondrion | 16.17 | 5.88 |
| VIT_13s0067g00760.t01 | Wine grape | cytosol, plastid | 14.85 | 5.7 |
| CDY60887 | Canola | cytosol | 23.1 | 5.03 |
| GSMUA_Achr7P20240_001 | Banana | mitochondrion | 11.22 | 4.86 |
| CDY38707 | Canola | cytosol, extracellular | 0.33 | 3.7 |
| TraesCS6A01G404000.1 | Wheat | cytosol | 4.29 | 2.38 |
| TraesCS6D01G387400.1 | Wheat | cytosol | 3.96 | 2.1 |
| TraesCS2B01G507000.1 | Wheat | cytosol | 4.95 | 2.05 |
| CDX68397 | Canola | cytosol | 0.99 | 1.21 |
| CDY45136 | Canola | extracellular, golgi | 1.32 | 0.99 |
| CDX86269 | Canola | cytosol | 0.99 | 0.48 |
| CDX82996 | Canola | cytosol | 0.33 | 0.27 |
| CDX82994 | Canola | nucleus | 0.33 | 0.22 |
| TraesCS7B01G501200.1 | Wheat | cytosol | 0.33 | 0.18 |
| VIT_13s0067g00740.t01 | Wine grape | extracellular | 0.33 | 0.18 |
| CDY00088 | Canola | cytosol | 0.33 | 0.15 |
| CDY38706 | Canola | cytosol | 0.0 | 0.0 |
| CDY45137 | Canola | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400031120 | Potato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX86272 | EnsemblPlantsGene:GSBRNA2T00144381001 | Gene3D:3.40.50.300 | GO:A0A078DB42 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:NB-ARC | InterPro:P-loop_NTPase | InterPro:RX-like_CC | ncoils:Coil |
| PANTHER:PTHR43886 | PANTHER:PTHR43886:SF8 | PFAM:PF00931 | PRINTS:PR00364 | ProteinID:CDX86272 | ProteinID:CDX86272.1 |
| SEG:seg | SUPFAM:SSF52540 | UniParc:UPI0004EE8247 | MapMan:35.1 | : | : |
Description
BnaA06g29890D
Coordinates
chrLK031845:-:710863..713447
Molecular Weight (calculated)
35063.3 Da
IEP (calculated)
7.085
GRAVY (calculated)
-0.444
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEVVVSVLA EGVVSFGMEK LWDLLSRESE RLQGVHEHVT DLERHLRKLQ SLLKDADAKK HENEVVRNLL EDVKNIVYDA EDIIESFVLK ESSGKEKGIK
101: RRVRKLSCFL GNRRDISIDI EGITKRMSEV VADMQSFGIK EIMSDGRSLS LKERQRVQRE IRQTFPKSSE KGLVGVEESV EDLVGHLVKK DNIQVVSISG
201: MGGIGKTTLA RQVFHHDIVR HRFNRFAWVC VSKEFQRKDI WQKILQDLRP HDENIKQMDE NKLQAELFLL LGKSRHLIVI DDVWKNEDWD LIKDAFLLRA
301: SDE
101: RRVRKLSCFL GNRRDISIDI EGITKRMSEV VADMQSFGIK EIMSDGRSLS LKERQRVQRE IRQTFPKSSE KGLVGVEESV EDLVGHLVKK DNIQVVSISG
201: MGGIGKTTLA RQVFHHDIVR HRFNRFAWVC VSKEFQRKDI WQKILQDLRP HDENIKQMDE NKLQAELFLL LGKSRHLIVI DDVWKNEDWD LIKDAFLLRA
301: SDE
001: MAEAFVSFGL EKLWDLLSRE SERLQGIDGQ LDGLKRQLRS LQSLLKDADA KKHGSDRVRN FLEDVKDLVF DAEDIIESYV LNKLSGKGKG VKKHVRRLAC
101: FLTDRHKVAS DIEGITKRIS EVIGEMQSFG IQQIIDGGRS LSLQERQRVQ REIRQTYPDS SESDLVGVEQ SVKELVGHLV ENDVHQVVSI AGMGGIGKTT
201: LARQVFHHDL VRRHFDGFAW VCVSQQFTQK HVWQRILQEL QPHDGDILQM DEYALQRKLF QLLEAGRYLV VLDDVWKKED WDVIKAVFPR KRGWKMLLTS
301: RNEGVGIHAD PTCLTFRASI LNPEESWKLC ERIVFPRRDE TEVRLDEEME AMGKEMVTHC GGLPLAVKAL GGLLANKHTV PEWKRVFDNI GSQIVGGSWL
401: DDNSLNSVYR ILSLSYEDLP THLKHCFLNL AHFPEDSEIS TYSLFYYWAA EGIYDGSTIE DSGEYYLEEL VRRNLVIADD NYLSWQSKYC QMHDMMREVC
501: LSKAKEENFL QIIIDPTCTS TINAQSPSRS RRLSIHSGKA FHILGHKNKT KVRSLIVPRF EEDYWIRSAS VFHNLTLLRV LDLSWVKFEG GKLPCSIGGL
601: IHLRYLSLYE AKVSHLPSTM RNLKLLLYLN LRVDTEEPIH VPNVLKEMIQ LRYLSLPLKM DDKTKLELGD LVNLEYLYGF STQHSSVTDL LRMTKLRYLA
701: VSLSERCNFE TLSSSLRELR NLETLNFLFS LETYMVDYMG EFVLDHFIHL KQLGLAVRMS KIPDQHQFPP HLVHLFLIYC GMEEDPMPIL EKLLHLKSVR
801: LARKAFLGSR MVCSKGGFPQ LCVIEISKES ELEEWIVEEG SMPCLRTLTI DDCKKLKELP DGLKYITSLK ELKIEGMKRE WKEKLVPGGE DYYKVQHIPD
901: VQFINCDQ
101: FLTDRHKVAS DIEGITKRIS EVIGEMQSFG IQQIIDGGRS LSLQERQRVQ REIRQTYPDS SESDLVGVEQ SVKELVGHLV ENDVHQVVSI AGMGGIGKTT
201: LARQVFHHDL VRRHFDGFAW VCVSQQFTQK HVWQRILQEL QPHDGDILQM DEYALQRKLF QLLEAGRYLV VLDDVWKKED WDVIKAVFPR KRGWKMLLTS
301: RNEGVGIHAD PTCLTFRASI LNPEESWKLC ERIVFPRRDE TEVRLDEEME AMGKEMVTHC GGLPLAVKAL GGLLANKHTV PEWKRVFDNI GSQIVGGSWL
401: DDNSLNSVYR ILSLSYEDLP THLKHCFLNL AHFPEDSEIS TYSLFYYWAA EGIYDGSTIE DSGEYYLEEL VRRNLVIADD NYLSWQSKYC QMHDMMREVC
501: LSKAKEENFL QIIIDPTCTS TINAQSPSRS RRLSIHSGKA FHILGHKNKT KVRSLIVPRF EEDYWIRSAS VFHNLTLLRV LDLSWVKFEG GKLPCSIGGL
601: IHLRYLSLYE AKVSHLPSTM RNLKLLLYLN LRVDTEEPIH VPNVLKEMIQ LRYLSLPLKM DDKTKLELGD LVNLEYLYGF STQHSSVTDL LRMTKLRYLA
701: VSLSERCNFE TLSSSLRELR NLETLNFLFS LETYMVDYMG EFVLDHFIHL KQLGLAVRMS KIPDQHQFPP HLVHLFLIYC GMEEDPMPIL EKLLHLKSVR
801: LARKAFLGSR MVCSKGGFPQ LCVIEISKES ELEEWIVEEG SMPCLRTLTI DDCKKLKELP DGLKYITSLK ELKIEGMKRE WKEKLVPGGE DYYKVQHIPD
901: VQFINCDQ
Arabidopsis Description
RPP8Disease resistance protein RPP8 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4J9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.