Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75044 | Canola | cytosol | 61.46 | 78.91 |
| CDX75047 | Canola | cytosol | 66.49 | 72.54 |
| CDX75041 | Canola | cytosol | 70.86 | 69.3 |
| CDX86272 | Canola | cytosol | 26.89 | 67.0 |
| CDY38707 | Canola | cytosol, extracellular | 2.25 | 62.96 |
| CDX86270 | Canola | cytosol | 28.08 | 60.4 |
| CDX85375 | Canola | cytosol | 51.52 | 58.58 |
| CDY66057 | Canola | cytosol | 52.45 | 53.23 |
| CDX86269 | Canola | cytosol | 43.31 | 52.57 |
| CDX75042 | Canola | plastid | 64.64 | 50.0 |
| CDY45137 | Canola | cytosol | 9.4 | 47.97 |
| CDY65486 | Canola | mitochondrion | 56.82 | 46.53 |
| CDY15085 | Canola | extracellular, golgi | 57.35 | 46.21 |
| CDY30905 | Canola | cytosol | 27.28 | 46.19 |
| Bra005270.1-P | Field mustard | cytosol | 48.61 | 45.53 |
| CDY05425 | Canola | cytosol | 29.67 | 43.24 |
| CDY33605 | Canola | cytosol | 46.49 | 41.34 |
| CDX93129 | Canola | cytosol | 51.13 | 40.98 |
| CDY24492 | Canola | cytosol | 43.84 | 40.86 |
| CDY30895 | Canola | cytosol | 36.82 | 40.06 |
| CDY66341 | Canola | nucleus | 39.34 | 38.77 |
| CDY05424 | Canola | cytosol | 25.96 | 38.66 |
| CDY05420 | Canola | cytosol | 28.48 | 38.46 |
| CDY66072 | Canola | cytosol | 42.65 | 38.15 |
| CDX92335 | Canola | cytosol | 43.71 | 38.11 |
| CDY05433 | Canola | cytosol | 33.51 | 37.82 |
| CDY28958 | Canola | cytosol | 43.58 | 37.34 |
| Bra040843.1-P | Field mustard | endoplasmic reticulum, extracellular | 33.11 | 37.31 |
| CDY26957 | Canola | cytosol | 27.28 | 36.98 |
| CDY48845 | Canola | nucleus | 43.44 | 36.53 |
| CDY27293 | Canola | cytosol, mitochondrion | 14.3 | 36.49 |
| CDX89618 | Canola | cytosol | 45.7 | 36.35 |
| CDY19984 | Canola | cytosol | 45.3 | 36.15 |
| VIT_13s0067g00750.t01 | Wine grape | cytosol | 17.88 | 35.81 |
| CDY38710 | Canola | cytosol, mitochondrion | 17.62 | 35.28 |
| CDY38706 | Canola | cytosol | 18.01 | 33.58 |
| CDY03593 | Canola | cytosol | 38.01 | 33.14 |
| CDY45150 | Canola | endoplasmic reticulum | 41.72 | 32.68 |
| CDY45054 | Canola | cytosol | 35.76 | 32.34 |
| CDY05434 | Canola | cytosol | 47.15 | 32.04 |
| CDY45136 | Canola | extracellular, golgi | 16.69 | 31.03 |
| VIT_09s0096g00930.t01 | Wine grape | cytosol, endoplasmic reticulum | 9.54 | 30.25 |
| VIT_13s0067g00810.t01 | Wine grape | cytosol | 36.82 | 30.09 |
| VIT_13s0067g00780.t01 | Wine grape | cytosol | 28.74 | 28.93 |
| VIT_13s0067g00790.t01 | Wine grape | cytosol | 36.16 | 28.71 |
| CDY00088 | Canola | cytosol | 23.97 | 27.93 |
| KRH01327 | Soybean | cytosol | 33.77 | 27.75 |
| TraesCS6B01G448000.1 | Wheat | cytosol | 9.93 | 27.68 |
| GSMUA_AchrUn_... | Banana | cytosol | 9.8 | 27.01 |
| TraesCS2D01G510100.1 | Wheat | cytosol | 17.22 | 26.69 |
| CDX82995 | Canola | cytosol | 10.99 | 26.6 |
| KRH45065 | Soybean | cytosol | 27.28 | 26.24 |
| VIT_13s0067g00760.t01 | Wine grape | cytosol, plastid | 27.42 | 26.2 |
| VIT_03s0038g01400.t01 | Wine grape | cytosol | 30.07 | 26.09 |
| PGSC0003DMT400075439 | Potato | cytosol | 32.58 | 25.73 |
| KRH12365 | Soybean | endoplasmic reticulum | 33.24 | 25.64 |
| Os11t0633500-01 | Rice | cytosol | 17.88 | 25.57 |
| TraesCS6B01G447800.1 | Wheat | cytosol | 17.88 | 25.38 |
| Solyc12g096920.1.1 | Tomato | extracellular | 32.05 | 25.37 |
| TraesCS7B01G501300.1 | Wheat | cytosol | 9.27 | 25.36 |
| TraesCS2D01G510000.1 | Wheat | cytosol | 25.83 | 25.32 |
| CDX68399 | Canola | cytosol | 7.28 | 25.23 |
| TraesCS2A01G129300.1 | Wheat | cytosol | 8.34 | 25.2 |
| KRH37369 | Soybean | extracellular | 25.83 | 25.13 |
| TraesCS6A01G403900.1 | Wheat | plasma membrane, vacuole | 24.9 | 24.83 |
| TraesCS2B01G151600.2 | Wheat | cytosol | 27.15 | 24.2 |
| TraesCS6B01G448300.2 | Wheat | cytosol, peroxisome, plasma membrane | 25.3 | 24.15 |
| TraesCS7A01G562500.1 | Wheat | cytosol | 17.75 | 24.14 |
| TraesCS7B01G501100.1 | Wheat | cytosol | 27.81 | 24.11 |
| TraesCS2B01G536900.1 | Wheat | cytosol | 17.62 | 24.05 |
| TraesCS7B01G501900.1 | Wheat | cytosol | 27.68 | 24.0 |
| TraesCS7B01G449900.2 | Wheat | cytosol | 28.08 | 23.95 |
| TraesCS6B01G448100.1 | Wheat | cytosol | 24.9 | 23.86 |
| TraesCS2A01G477200.1 | Wheat | cytosol | 21.32 | 23.82 |
| GSMUA_Achr7P20240_001 | Banana | mitochondrion | 21.85 | 23.61 |
| TraesCS6B01G447900.1 | Wheat | cytosol | 22.91 | 23.6 |
| GSMUA_AchrUn_... | Banana | cytosol | 23.44 | 23.6 |
| TraesCS2D01G510300.1 | Wheat | cytosol | 17.09 | 23.58 |
| TraesCS7B01G501000.1 | Wheat | cytosol | 27.28 | 23.57 |
| TraesCS7B01G423500.1 | Wheat | cytosol | 27.02 | 23.56 |
| TraesCS7A01G562000.1 | Wheat | cytosol | 27.28 | 23.54 |
| HORVU2Hr1G022620.8 | Barley | cytosol | 27.15 | 23.54 |
| TraesCS7D01G548100.1 | Wheat | cytosol | 27.68 | 23.51 |
| GSMUA_Achr7P20220_001 | Banana | cytosol | 27.95 | 23.47 |
| GSMUA_Achr7P20230_001 | Banana | cytosol | 27.55 | 23.42 |
| OQU82378 | Sorghum | nucleus | 25.96 | 23.39 |
| TraesCS7B01G500700.1 | Wheat | cytosol | 26.23 | 23.32 |
| TraesCS7B01G500900.1 | Wheat | cytosol | 27.02 | 23.31 |
| VIT_13s0067g00740.t01 | Wine grape | extracellular | 17.09 | 23.16 |
| TraesCS6D01G387500.1 | Wheat | cytosol, plastid | 24.24 | 23.14 |
| TraesCS1D01G324700.2 | Wheat | cytosol | 26.36 | 22.87 |
| PGSC0003DMT400019327 | Potato | cytosol, extracellular | 14.57 | 22.87 |
| TraesCS1A01G323600.1 | Wheat | cytosol | 26.36 | 22.85 |
| HORVU1Hr1G075170.1 | Barley | cytosol | 26.23 | 22.76 |
| TraesCS1B01G336700.1 | Wheat | cytosol | 24.11 | 22.69 |
| TraesCS6B01G448400.1 | Wheat | cytosol | 25.43 | 22.64 |
| TraesCS7A01G561900.4 | Wheat | cytosol | 27.28 | 22.44 |
| TraesCS2A01G459100.1 | Wheat | plastid | 23.58 | 22.39 |
| TraesCS7B01G500800.1 | Wheat | cytosol | 21.32 | 22.33 |
| TraesCS7A01G561700.1 | Wheat | cytosol | 25.56 | 22.23 |
| TraesCS6D01G387400.1 | Wheat | cytosol | 16.56 | 21.89 |
| PGSC0003DMT400031120 | Potato | cytosol | 8.74 | 21.57 |
| TraesCS5A01G261700.1 | Wheat | cytosol | 25.17 | 21.57 |
| HORVU5Hr1G072540.26 | Barley | cytosol | 25.03 | 21.5 |
| TraesCS6A01G404000.1 | Wheat | cytosol | 15.5 | 21.39 |
| CDX81333 | Canola | nucleus | 15.36 | 21.32 |
| TraesCS5D01G269100.1 | Wheat | cytosol | 19.34 | 21.19 |
| CDY60887 | Canola | cytosol | 39.07 | 21.18 |
| TraesCS5A01G261600.1 | Wheat | cytosol | 24.64 | 21.11 |
| TraesCS2B01G507100.1 | Wheat | cytosol | 26.36 | 20.97 |
| TraesCS5B01G259900.1 | Wheat | cytosol | 25.7 | 20.88 |
| TraesCS2D01G481300.1 | Wheat | cytosol | 26.36 | 20.79 |
| Os10t0183000-01 | Rice | plasma membrane | 24.24 | 20.47 |
| CDX82996 | Canola | cytosol | 10.2 | 20.42 |
| TraesCS7B01G501200.1 | Wheat | cytosol | 14.83 | 20.36 |
| VIT_13s0067g00830.t01 | Wine grape | cytosol | 36.42 | 19.99 |
| Os03t0709200-01 | Rice | cytosol | 25.3 | 19.92 |
| CDY18642 | Canola | cytosol, nucleus, peroxisome | 9.54 | 19.51 |
| CDX82994 | Canola | nucleus | 11.52 | 19.29 |
| CDX68397 | Canola | cytosol | 6.23 | 19.03 |
| TraesCS2B01G507000.1 | Wheat | cytosol | 18.28 | 18.88 |
| Zm00001d045512_P001 | Maize | cytosol, mitochondrion | 20.0 | 18.13 |
Protein Annotations
| Gene3D:1.10.8.430 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | GO:A0A078D447 | EnsemblPlants:CDX84131 |
| ProteinID:CDX84131 | ProteinID:CDX84131.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0043531 | EnsemblPlantsGene:GSBRNA2T00141140001 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43886 | PANTHER:PTHR43886:SF8 | InterPro:RX-like_CC | SUPFAM:SSF52058 |
| SUPFAM:SSF52540 | UniParc:UPI0004EE7B17 | SEG:seg | : | : | : |
Description
BnaC04g08930D
Coordinates
chrLK031836:+:64409..68958
Molecular Weight (calculated)
87375.0 Da
IEP (calculated)
7.535
GRAVY (calculated)
-0.393
Length
755 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEGVVSFGV QKLWELLGRE SDRLQGVHEK VDDLKCQMRM LQSLLKDADA KKHGSEVVRN FLEDVKDIVF DAEDIIESFL LKELSGNQKG VKGRVKRLAC
101: FLVDRRGLSM DIEGITKRMS KVVAQMQGFG IQQIIYRSPS LQERQRPREN RQTYSKRSQK DLVGVEQSVN ELVGHLVEND SIQVVSISGM GGIGKTTLAR
201: QVFHHDIVRS HFDGFAWICV SQDFKKKDIW QKLLQELRPH DTGIEQMNED TLQAKIFHSL ETSKYLIVMD DVWKNEDWDK IKDVFPQERG WKMILTSRNE
301: GVGLHADPSC FPFRPKILTP EESWKLCESI AFPRREITEF NVDEELEAMG KKMVTYCGGL PLAVKVLGGL LANKTMVEEW KRVDDNIQTQ IVRIDDNKYI
401: DELVRRNMVI VVKEYWSWEY CQMHDMMREV CLYKAKEENF LQFIKVPTTS TSTINAHTPT RSRRLAVYGG NALDIMGRKN NKKARSVLGF GLDSNLWKQS
501: AQGLRNLQLL RVLHLSLDYK NDSKGGRIPS SIGKLIHLRY LSLDMELRFL RLPHFLDAKT KYTSEILASS LCELRNLEEL TLIDENNESD GAHDVDFVWN
601: FIHLRYLELD IHTTRLPDHS RFPPHLARIS LSYCEMEEDP LQILEKLLHL KSVELGRRSF MGRKMMVCSK GGFPQLCKLE ICCLDNLEEW IVEERSMPCL
701: RTLSIVYCEK LKELPEGLKY ITSLKELKIT DKNKEWKTTL VPSEPTQNQY PLLIV
101: FLVDRRGLSM DIEGITKRMS KVVAQMQGFG IQQIIYRSPS LQERQRPREN RQTYSKRSQK DLVGVEQSVN ELVGHLVEND SIQVVSISGM GGIGKTTLAR
201: QVFHHDIVRS HFDGFAWICV SQDFKKKDIW QKLLQELRPH DTGIEQMNED TLQAKIFHSL ETSKYLIVMD DVWKNEDWDK IKDVFPQERG WKMILTSRNE
301: GVGLHADPSC FPFRPKILTP EESWKLCESI AFPRREITEF NVDEELEAMG KKMVTYCGGL PLAVKVLGGL LANKTMVEEW KRVDDNIQTQ IVRIDDNKYI
401: DELVRRNMVI VVKEYWSWEY CQMHDMMREV CLYKAKEENF LQFIKVPTTS TSTINAHTPT RSRRLAVYGG NALDIMGRKN NKKARSVLGF GLDSNLWKQS
501: AQGLRNLQLL RVLHLSLDYK NDSKGGRIPS SIGKLIHLRY LSLDMELRFL RLPHFLDAKT KYTSEILASS LCELRNLEEL TLIDENNESD GAHDVDFVWN
601: FIHLRYLELD IHTTRLPDHS RFPPHLARIS LSYCEMEEDP LQILEKLLHL KSVELGRRSF MGRKMMVCSK GGFPQLCKLE ICCLDNLEEW IVEERSMPCL
701: RTLSIVYCEK LKELPEGLKY ITSLKELKIT DKNKEWKTTL VPSEPTQNQY PLLIV
001: MAEGVVSFGV QKLWALLNRE SERLNGIDEQ VDGLKRQLRG LQSLLKDADA KKHGSDRVRN FLEDVKDLVF DAEDIIESYV LNKLRGEGKG VKNHVRRLAC
101: FLTDRHKVAS DIEGITKRIS KVIGEMQSLG IQQQIIDGGR SLSLQDIQRE IRQTFPNSSE SDLVGVEQSV EELVGPMVEI DNIQVVSISG MGGIGKTTLA
201: RQIFHHDLVR RHFDGFAWVC VSQQFTQKHV WQRILQELRP HDGEILQMDE YTIQGKLFQL LETGRYLVVL DDVWKEEDWD RIKEVFPRKR GWKMLLTSRN
301: EGVGLHADPT CLSFRARILN PKESWKLFER IVPRRNETEY EEMEAIGKEM VTYCGGLPLA VKVLGGLLAN KHTASEWKRV SENIGAQIVG KSCLDDNSLN
401: SVYRILSLSY EDLPTDLKHC FLYLAHFPED YKIKTRTLYS YWAAEGIYDG LTILDSGEDY LEELVRRNLV IAEKSNLSWR LKLCQMHDMM REVCISKAKV
501: ENFLQIIKVP TSTSTIIAQS PSRSRRLTVH SGKAFHILGH KKKVRSLLVL GLKEDLWIQS ASRFQSLPLL RVLDLSSVKF EGGKLPSSIG GLIHLRFLSL
601: HQAVVSHLPS TIRNLKLMLY LNLHVAIGVP VHVPNVLKEM LELRYLSLPL DMHDKTKLEL GDLVNLEYLW CFSTQHSSVT DLLRMTKLRF FGVSFSERCT
701: FENLSSSLRQ FRKLETLSFI YSRKTYMVDY VGEFVLDFIH LKKLSLGVHL SKIPDQHQLP PHIAHIYLLF CHMEEDPMPI LEKLLHLKSV ELRRKAFIGR
801: RMVCSKGGFP QLRALQISEQ SELEEWIVEE GSMPCLRDLI IHSCEKLEEL PDGLKYVTSL KELKIEGMKR EWKEKLVGED YYKVQHIPDV QFFNCDDEQR
901: E
101: FLTDRHKVAS DIEGITKRIS KVIGEMQSLG IQQQIIDGGR SLSLQDIQRE IRQTFPNSSE SDLVGVEQSV EELVGPMVEI DNIQVVSISG MGGIGKTTLA
201: RQIFHHDLVR RHFDGFAWVC VSQQFTQKHV WQRILQELRP HDGEILQMDE YTIQGKLFQL LETGRYLVVL DDVWKEEDWD RIKEVFPRKR GWKMLLTSRN
301: EGVGLHADPT CLSFRARILN PKESWKLFER IVPRRNETEY EEMEAIGKEM VTYCGGLPLA VKVLGGLLAN KHTASEWKRV SENIGAQIVG KSCLDDNSLN
401: SVYRILSLSY EDLPTDLKHC FLYLAHFPED YKIKTRTLYS YWAAEGIYDG LTILDSGEDY LEELVRRNLV IAEKSNLSWR LKLCQMHDMM REVCISKAKV
501: ENFLQIIKVP TSTSTIIAQS PSRSRRLTVH SGKAFHILGH KKKVRSLLVL GLKEDLWIQS ASRFQSLPLL RVLDLSSVKF EGGKLPSSIG GLIHLRFLSL
601: HQAVVSHLPS TIRNLKLMLY LNLHVAIGVP VHVPNVLKEM LELRYLSLPL DMHDKTKLEL GDLVNLEYLW CFSTQHSSVT DLLRMTKLRF FGVSFSERCT
701: FENLSSSLRQ FRKLETLSFI YSRKTYMVDY VGEFVLDFIH LKKLSLGVHL SKIPDQHQLP PHIAHIYLLF CHMEEDPMPI LEKLLHLKSV ELRRKAFIGR
801: RMVCSKGGFP QLRALQISEQ SELEEWIVEE GSMPCLRDLI IHSCEKLEEL PDGLKYVTSL KELKIEGMKR EWKEKLVGED YYKVQHIPDV QFFNCDDEQR
901: E
Arabidopsis Description
RPP8L3Disease resistance RPP8-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJB5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.