Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005278.1-P | Field mustard | cytosol | 34.93 | 45.0 |
| Bra005273.1-P | Field mustard | cytosol | 46.27 | 37.13 |
| Bra005270.1-P | Field mustard | cytosol | 41.04 | 34.12 |
| CDX84131 | Canola | cytosol | 37.31 | 33.11 |
| Bra037451.1-P | Field mustard | cytosol | 38.96 | 31.33 |
| Bra040841.1-P | Field mustard | cytosol | 32.99 | 27.42 |
| Bra005271.1-P | Field mustard | cytosol | 45.82 | 26.65 |
| Bra013213.1-P | Field mustard | cytosol | 36.87 | 25.44 |
| Bra027843.1-P | Field mustard | cytosol, mitochondrion | 22.24 | 23.88 |
| Bra018448.1-P | Field mustard | cytosol | 33.28 | 22.99 |
| Bra013134.1-P | Field mustard | cytosol, nucleus, peroxisome | 30.3 | 22.28 |
| VIT_13s0067g00740.t01 | Wine grape | extracellular | 18.51 | 22.26 |
| Bra035424.1-P | Field mustard | cytosol | 28.51 | 21.22 |
| Bra036206.1-P | Field mustard | cytosol | 27.91 | 20.85 |
| Bra027866.1-P | Field mustard | cytosol | 28.81 | 20.77 |
| Bra014241.1-P | Field mustard | cytosol | 27.01 | 19.57 |
| VIT_03s0038g01400.t01 | Wine grape | cytosol | 25.37 | 19.54 |
| Bra027834.1-P | Field mustard | cytosol | 28.66 | 19.53 |
| VIT_13s0067g00790.t01 | Wine grape | cytosol | 27.61 | 19.45 |
| VIT_13s0067g00810.t01 | Wine grape | cytosol | 26.42 | 19.16 |
| GSMUA_AchrUn_... | Banana | cytosol | 7.76 | 18.98 |
| KRH01327 | Soybean | cytosol | 25.67 | 18.72 |
| VIT_13s0067g00760.t01 | Wine grape | cytosol, plastid | 21.79 | 18.48 |
| PGSC0003DMT400075439 | Potato | cytosol | 25.67 | 17.99 |
| Solyc12g096920.1.1 | Tomato | extracellular | 25.52 | 17.92 |
| VIT_13s0067g00780.t01 | Wine grape | cytosol | 19.85 | 17.73 |
| TraesCS6B01G447800.1 | Wheat | cytosol | 14.03 | 17.67 |
| TraesCS2D01G510100.1 | Wheat | cytosol | 12.69 | 17.45 |
| KRH37369 | Soybean | extracellular | 20.0 | 17.27 |
| KRH12365 | Soybean | endoplasmic reticulum | 24.93 | 17.06 |
| Os11t0633500-01 | Rice | cytosol | 13.43 | 17.05 |
| GSMUA_Achr7P20240_001 | Banana | mitochondrion | 17.76 | 17.02 |
| TraesCS6A01G404000.1 | Wheat | cytosol | 13.88 | 17.0 |
| TraesCS7A01G562500.1 | Wheat | cytosol | 14.03 | 16.94 |
| TraesCS2D01G510300.1 | Wheat | cytosol | 13.73 | 16.82 |
| Bra029405.1-P | Field mustard | endoplasmic reticulum, extracellular | 29.1 | 16.78 |
| TraesCS2A01G477200.1 | Wheat | cytosol | 16.87 | 16.72 |
| TraesCS2B01G536900.1 | Wheat | cytosol | 13.73 | 16.64 |
| KRH45065 | Soybean | cytosol | 19.25 | 16.43 |
| GSMUA_AchrUn_... | Banana | cytosol | 18.36 | 16.4 |
| TraesCS7B01G501200.1 | Wheat | cytosol | 13.43 | 16.36 |
| TraesCS6D01G387400.1 | Wheat | cytosol | 13.88 | 16.29 |
| PGSC0003DMT400019327 | Potato | cytosol, extracellular | 11.49 | 16.01 |
| Bra005277.1-P | Field mustard | cytosol | 8.06 | 15.79 |
| TraesCS6B01G447900.1 | Wheat | cytosol | 17.16 | 15.69 |
| TraesCS6D01G387500.1 | Wheat | cytosol, plastid | 18.51 | 15.68 |
| TraesCS2D01G510000.1 | Wheat | cytosol | 17.91 | 15.58 |
| GSMUA_Achr7P20220_001 | Banana | cytosol | 20.9 | 15.57 |
| TraesCS5D01G269100.1 | Wheat | cytosol | 15.97 | 15.53 |
| GSMUA_Achr7P20230_001 | Banana | cytosol | 20.45 | 15.43 |
| Bra040891.1-P | Field mustard | cytosol | 7.91 | 15.41 |
| TraesCS7B01G501000.1 | Wheat | cytosol | 20.0 | 15.33 |
| TraesCS6A01G403900.1 | Wheat | plasma membrane, vacuole | 17.31 | 15.32 |
| TraesCS2A01G459100.1 | Wheat | plastid | 18.06 | 15.22 |
| TraesCS6B01G448300.2 | Wheat | cytosol, peroxisome, plasma membrane | 17.91 | 15.17 |
| TraesCS7B01G500800.1 | Wheat | cytosol | 16.27 | 15.12 |
| TraesCS6B01G448100.1 | Wheat | cytosol | 17.76 | 15.1 |
| TraesCS2B01G151600.2 | Wheat | cytosol | 18.96 | 14.99 |
| TraesCS7B01G423500.1 | Wheat | cytosol | 19.25 | 14.9 |
| OQU82378 | Sorghum | nucleus | 18.51 | 14.8 |
| VIT_09s0096g00930.t01 | Wine grape | cytosol, endoplasmic reticulum | 5.22 | 14.71 |
| TraesCS6B01G448400.1 | Wheat | cytosol | 18.36 | 14.5 |
| HORVU2Hr1G022620.8 | Barley | cytosol | 18.81 | 14.47 |
| TraesCS7D01G548100.1 | Wheat | cytosol | 18.96 | 14.29 |
| TraesCS7A01G562000.1 | Wheat | cytosol | 18.36 | 14.06 |
| TraesCS2D01G481300.1 | Wheat | cytosol | 20.0 | 14.0 |
| TraesCS7B01G449900.2 | Wheat | cytosol | 18.36 | 13.9 |
| TraesCS7A01G561700.1 | Wheat | cytosol | 17.91 | 13.82 |
| TraesCS2B01G507000.1 | Wheat | cytosol | 15.07 | 13.82 |
| TraesCS7B01G500900.1 | Wheat | cytosol | 17.91 | 13.71 |
| TraesCS2B01G507100.1 | Wheat | cytosol | 19.4 | 13.7 |
| TraesCS1D01G324700.2 | Wheat | cytosol | 17.76 | 13.68 |
| HORVU1Hr1G075170.1 | Barley | cytosol | 17.76 | 13.68 |
| TraesCS7B01G501100.1 | Wheat | cytosol | 17.76 | 13.66 |
| Os10t0183000-01 | Rice | plasma membrane | 18.21 | 13.65 |
| TraesCS7A01G561900.4 | Wheat | cytosol | 18.66 | 13.62 |
| TraesCS1A01G323600.1 | Wheat | cytosol | 17.61 | 13.55 |
| TraesCS7B01G501900.1 | Wheat | cytosol | 17.61 | 13.55 |
| TraesCS7B01G500700.1 | Wheat | cytosol | 17.16 | 13.55 |
| HORVU5Hr1G072540.26 | Barley | cytosol | 17.76 | 13.54 |
| Bra037123.1-P | Field mustard | cytosol | 16.12 | 13.43 |
| TraesCS1B01G336700.1 | Wheat | cytosol | 15.97 | 13.34 |
| TraesCS5A01G261600.1 | Wheat | cytosol | 17.46 | 13.28 |
| TraesCS5A01G261700.1 | Wheat | cytosol | 17.46 | 13.28 |
| TraesCS5B01G259900.1 | Wheat | cytosol | 18.06 | 13.02 |
| VIT_13s0067g00830.t01 | Wine grape | cytosol | 26.72 | 13.01 |
| Zm00001d045512_P001 | Maize | cytosol, mitochondrion | 16.12 | 12.97 |
| Bra037448.1-P | Field mustard | cytosol | 16.12 | 12.69 |
| VIT_13s0067g00750.t01 | Wine grape | cytosol | 7.01 | 12.47 |
| TraesCS7B01G501300.1 | Wheat | cytosol | 4.93 | 11.96 |
| TraesCS6B01G448000.1 | Wheat | cytosol | 4.63 | 11.44 |
| Os03t0709200-01 | Rice | cytosol | 16.12 | 11.26 |
| TraesCS2A01G129300.1 | Wheat | cytosol | 4.03 | 10.8 |
| PGSC0003DMT400031120 | Potato | cytosol | 2.84 | 6.21 |
| Bra037453.1-P | Field mustard | nucleus | 8.96 | 5.52 |
Protein Annotations
| Gene3D:1.10.8.430 | Gene3D:3.80.10.10 | MapMan:35.1 | EnsemblPlantsGene:Bra040843 | EnsemblPlants:Bra040843.1 | EnsemblPlants:Bra040843.1-P |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 |
| GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | UniProt:M4FIB4 | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43886 | PANTHER:PTHR43886:SF8 | SUPFAM:SSF52058 | SUPFAM:SSF52540 |
| UniParc:UPI000253E966 | : | : | : | : | : |
Description
AT1G53350 (E=3e-086) | ATP binding
Coordinates
chrScaffold000277:+:21870..32431
Molecular Weight (calculated)
76378.8 Da
IEP (calculated)
6.712
GRAVY (calculated)
-0.405
Length
670 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKMVTYCG GLPLAVKVLG GLLANKNMVE EWKRVDDNIQ TQIVRIDDNS QDSVYRVLSM SYEDLPMQLK HCFLYLAHFP EDDKIQVRIL YNLWEAEGII
101: TSSCDGETTR KIGEEYIDEL VRRNMVIAVK DDLSCKWKYC QMHDMMREVC LYKAKEENFL QFIEVPTSST STINAHTPTR ARRLVVHGDG NAFDMLGRKN
201: NQKARSVLGF GLDSNLWKQQ KNPSIYVPSR RISSGTAAAT LRYATAMRSY STSFMEERDT FGPIQVSSAL SLLSLCQILG SPDAETLQNF EIGDEHERMS
301: KPIVCGFGVL KKCVAKHSYK SITIEFDVDE ELEAMGKEMV AYCGGLPLAI KVLGGLLANK TMVEEWKRVD DNIQTQIVRI DDKSQDSVYR VLSMSYEDLP
401: MQLKHCFLYL AHFPEDDKIQ VERLYYYWEA EGIITSSGDG ETTRKIGEDY IEELVRRNMV IGVKEDLSCR WEYCQMHDMM REVCLYKAKE ENFLQFIEVP
501: TSSTSTINAH TPTRSRRLAV YGGDTLGCKN NKKVRSVLGF GLDSNLWKQS AQGLRNLQSL RVLDLSLDYK NDSKGGRIPS SIGKLIHLRY LSLDMGWGTH
601: ERTEGLKYIT SLKELEIIHK NKEWETKLVP GGESYHKVQH IVTTMMATNK ESKPVSGEPT QDQYPPLPIV
101: TSSCDGETTR KIGEEYIDEL VRRNMVIAVK DDLSCKWKYC QMHDMMREVC LYKAKEENFL QFIEVPTSST STINAHTPTR ARRLVVHGDG NAFDMLGRKN
201: NQKARSVLGF GLDSNLWKQQ KNPSIYVPSR RISSGTAAAT LRYATAMRSY STSFMEERDT FGPIQVSSAL SLLSLCQILG SPDAETLQNF EIGDEHERMS
301: KPIVCGFGVL KKCVAKHSYK SITIEFDVDE ELEAMGKEMV AYCGGLPLAI KVLGGLLANK TMVEEWKRVD DNIQTQIVRI DDKSQDSVYR VLSMSYEDLP
401: MQLKHCFLYL AHFPEDDKIQ VERLYYYWEA EGIITSSGDG ETTRKIGEDY IEELVRRNMV IGVKEDLSCR WEYCQMHDMM REVCLYKAKE ENFLQFIEVP
501: TSSTSTINAH TPTRSRRLAV YGGDTLGCKN NKKVRSVLGF GLDSNLWKQS AQGLRNLQSL RVLDLSLDYK NDSKGGRIPS SIGKLIHLRY LSLDMGWGTH
601: ERTEGLKYIT SLKELEIIHK NKEWETKLVP GGESYHKVQH IVTTMMATNK ESKPVSGEPT QDQYPPLPIV
001: MAEAVVSFGV EKLWELLSRE SARLNGIDEQ VDGLKRQLGR LQSLLKDADA KKNETERVRN FLEDVKDIVY DADDIIESFL LNELRGKEKG IKKQVRTLAC
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH
Arabidopsis Description
RPP8L2Probable disease resistance RPP8-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P0C8S1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.