Factsheet for VIT_03s0038g01550.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0038g01540.t01	Wine grape	cytosol	43.12	91.77
VIT_03s0038g01520.t01	Wine grape	cytosol	67.46	64.32
VIT_03s0038g01610.t01	Wine grape	cytosol	33.56	58.76
VIT_03s0038g01670.t01	Wine grape	cytosol	37.54	55.65
VIT_03s0038g01630.t01	Wine grape	cytosol	50.4	49.94
VIT_09s0096g00930.t01	Wine grape	cytosol, endoplasmic reticulum	11.72	43.28
VIT_15s0045g00980.t01	Wine grape	cytosol	27.42	40.37
VIT_13s0067g00750.t01	Wine grape	cytosol	16.5	38.46
VIT_13s0067g00780.t01	Wine grape	cytosol	31.97	37.47
VIT_15s0046g03660.t01	Wine grape	cytosol	35.72	37.34
VIT_15s0045g01010.t01	Wine grape	cytosol	8.19	37.31
VIT_15s0045g00810.t01	Wine grape	cytosol	17.98	37.09
Os11t0633500-01	Rice	cytosol	22.18	36.93
PGSC0003DMT400021403	Potato	cytosol	39.7	36.74
VIT_16s0022g01330.t01	Wine grape	cytosol	26.39	36.65
VIT_13s0067g00810.t01	Wine grape	cytosol	38.45	36.58
TraesCS2D01G510100.1	Wheat	cytosol	20.25	36.55
GSMUA_AchrUn_...	Banana	cytosol	11.38	36.5
VIT_15s0046g02800.t01	Wine grape	cytosol	28.33	36.3
VIT_03s0038g01400.t01	Wine grape	cytosol	35.72	36.09
TraesCS7A01G562500.1	Wheat	cytosol	22.75	36.04
VIT_15s0021g00130.t01	Wine grape	cytosol, nucleus, plastid	12.74	36.01
VIT_13s0067g00790.t01	Wine grape	cytosol	38.79	35.86
VIT_03s0038g01530.t01	Wine grape	cytosol	45.28	35.38
TraesCS6B01G447800.1	Wheat	cytosol	21.27	35.15
VIT_13s0067g00760.t01	Wine grape	cytosol, plastid	31.06	34.56
VIT_15s0045g01020.t01	Wine grape	cytosol	25.14	34.37
VIT_00s0448g00020.t01	Wine grape	cytosol	36.86	34.36
VIT_15s0045g00920.t01	Wine grape	cytosol	20.25	34.23
VIT_15s0046g02730.t01	Wine grape	cytosol	35.61	34.02
VIT_15s0046g02820.t01	Wine grape	cytosol	36.52	34.0
VIT_15s0046g02750.t01	Wine grape	cytosol	36.18	33.97
VIT_15s0045g00880.t01	Wine grape	cytosol	29.12	33.91
TraesCS2B01G536900.1	Wheat	cytosol	21.27	33.82
VIT_15s0045g00680.t01	Wine grape	cytosol	29.69	33.76
VIT_15s0045g00640.t01	Wine grape	cytosol	18.32	33.33
TraesCS7B01G501300.1	Wheat	cytosol	10.35	32.97
TraesCS6B01G448000.1	Wheat	cytosol	10.13	32.84
VIT_15s0046g02810.t01	Wine grape	cytosol	34.81	32.66
VIT_13s0067g00740.t01	Wine grape	extracellular	20.59	32.5
TraesCS6A01G403900.1	Wheat	plasma membrane, vacuole	27.87	32.36
TraesCS2A01G477200.1	Wheat	cytosol	24.8	32.25
TraesCS2D01G510300.1	Wheat	cytosol	20.02	32.18
TraesCS2D01G510000.1	Wheat	cytosol	28.1	32.08
TraesCS7B01G500700.1	Wheat	cytosol	30.83	31.92
TraesCS2B01G151600.2	Wheat	cytosol	30.72	31.88
TraesCS6B01G448100.1	Wheat	cytosol	28.56	31.85
TraesCS1B01G336700.1	Wheat	cytosol	29.01	31.8
TraesCS7B01G423500.1	Wheat	cytosol	31.06	31.52
GSMUA_Achr7P20240_001	Banana	mitochondrion	25.03	31.47
TraesCS7B01G501900.1	Wheat	cytosol	31.17	31.46
TraesCS6B01G448300.2	Wheat	cytosol, peroxisome, plasma membrane	28.21	31.35
TraesCS7A01G562000.1	Wheat	cytosol	31.17	31.31
GSMUA_Achr7P20230_001	Banana	cytosol	31.51	31.19
TraesCS7B01G501100.1	Wheat	cytosol	30.83	31.11
TraesCS6B01G447900.1	Wheat	cytosol	25.94	31.11
GSMUA_Achr7P20220_001	Banana	cytosol	31.74	31.03
TraesCS7B01G500800.1	Wheat	cytosol	25.37	30.93
TraesCS6D01G387500.1	Wheat	cytosol, plastid	27.76	30.85
TraesCS7B01G500900.1	Wheat	cytosol	30.6	30.74
TraesCS7B01G501000.1	Wheat	cytosol	30.49	30.66
HORVU2Hr1G022620.8	Barley	cytosol	30.38	30.65
TraesCS7D01G548100.1	Wheat	cytosol	30.94	30.6
HORVU1Hr1G075170.1	Barley	cytosol	30.15	30.46
TraesCS1D01G324700.2	Wheat	cytosol	30.15	30.46
TraesCS7A01G561700.1	Wheat	cytosol	29.92	30.3
TraesCS6D01G387400.1	Wheat	cytosol	19.68	30.3
TraesCS7B01G449900.2	Wheat	cytosol	30.49	30.28
GSMUA_AchrUn_...	Banana	cytosol	25.82	30.27
TraesCS1A01G323600.1	Wheat	cytosol	29.35	29.62
TraesCS2A01G129300.1	Wheat	cytosol	8.42	29.6
TraesCS7A01G561900.4	Wheat	cytosol	30.72	29.41
TraesCS6A01G404000.1	Wheat	cytosol	18.2	29.25
TraesCS6B01G448400.1	Wheat	cytosol	27.99	29.01
OQU82378	Sorghum	nucleus	27.3	28.64
TraesCS5D01G269100.1	Wheat	cytosol	22.41	28.59
TraesCS7B01G501200.1	Wheat	cytosol	17.75	28.36
TraesCS2A01G459100.1	Wheat	plastid	25.48	28.18
HORVU5Hr1G072540.26	Barley	cytosol	26.85	26.85
Os03t0709200-01	Rice	cytosol	29.12	26.69
TraesCS2B01G507100.1	Wheat	cytosol	28.67	26.55
TraesCS5A01G261700.1	Wheat	cytosol	26.51	26.45
Os10t0183000-01	Rice	plasma membrane	26.85	26.4
TraesCS5A01G261600.1	Wheat	cytosol	26.17	26.11
TraesCS2D01G481300.1	Wheat	cytosol	28.21	25.91
TraesCS5B01G259900.1	Wheat	cytosol	27.3	25.83
TraesCS2B01G507000.1	Wheat	cytosol	20.02	24.08
VIT_13s0067g00830.t01	Wine grape	cytosol	37.43	23.91
Zm00001d045512_P001	Maize	cytosol, mitochondrion	21.73	22.93

Protein Annotations

Gene3D:1.10.8.430	EntrezGene:100852849	wikigene:100852849	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1
EMBL:AM458918	ProteinID:CAN72325	ProteinID:CAN72325.1	ProteinID:CCB60659	ProteinID:CCB60659.1	ncoils:Coil
UniProt:F6I143	EMBL:FN596508	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0016747
GO:GO:0043531	InterPro:IPR032675	EntrezGene:LOC100852849	wikigene:LOC100852849	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF7	InterPro:RX-like_CC
SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI0002108604	ArrayExpress:VIT_03s0038g01550	EnsemblPlantsGene:VIT_03s0038g01550	EnsemblPlants:VIT_03s0038g01550.t01
RefSeq:XP_003631549	RefSeq:XP_003631549.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3:-:1066258..1068897

Molecular Weight (calculated)

101152.0 Da

IEP (calculated)

9.117

GRAVY (calculated)

-0.233

Length

879 amino acids

Sequence
(BLAST)

001: MAESAVSFAV ERIGDALLQK AIFLKGVHEQ VDRMQRELKR MQCFLKDADA KQQEDERVRH WVSEIQDVAY DAEDAIDAFI FNVESGRTKF FPCRMFKKLV
101: SSCKVGKEIE AIQIKIQDIS KSRETYGINS IGEATSQAGQ RLQKLRYISP LVKEEIIVGL KEDTDKLVEQ LVKGDERRRA VSIVGMGGIG KTTLAKKVYN
201: DSQVMGYFRF CRAWAYVSQD CRPRDVFQNI LNQIPYKPNE DEAKKIEKMQ EHEFGDFLHE RLKEKRFLVV LDDIWESDDW KCLAKAFPEE NNGSRLLLTT
301: RNKNVALQAD AQSVPYEVKL LSEEESWKLF CRSAIPGNVT ESCPPELKEL GEKMVKKCAG LPLAIVVLGG LLSSRTQLLT VWEEVFNKLR AHFAVSNGVD
401: AILSLSYIDL PHNLKSCFLY LGLFPEDKVI SKRRLLLLWI AEGFITQQDE QRLEDTAEDY LNQLINRNLV QVVSVSVNER VTRCRIHDLV RDLCIKKAKE
501: QNFFEIKNDI VSPSSTSSSL PSTKSRRLGI YLDFKRYASK QNSTSYVRSL LFFGDRPLSS NFIYKYFKLL RVLDLEAVGI ISQPNSLGKL VHLRYLTLKR
601: VENFNDPYLL SFLGKLKGLQ TLGVEFSTEV PILIQKMENL RYLFLSYYKK VGKPLQIDTL RNLQTLSGIY FSDWQQNDTS EFTSLRKLKI EVDDVTVAEF
701: SNSIAKLANL RSLYLEAVSP NFIPCFVMNS WLHLSKLLLK GSIPMLPKAD EFPPSLTQLT LENIRLGHGH MMILEKLPKL LIFRLRRMSK YLEEEMQVSA
801: DGFPQLKILQ LSGLRTSPRL LIINKGGMPK LTHLQIFECY FNIDGLGELL HLRKVDVNVA YHRWISSLPY PSEWHKIRR

Best Arabidopsis Sequence Match ( AT3G46530.1 )
(BLAST)

001: MVDAITEFVV GKIGNYLIEE ASMFMAVKED LEELKTELTC IHGYLKDVEA REREDEVSKE WSKLVLDFAY DVEDVLDTYH LKLEERSQRR GLRRLTNKIG
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC

Arabidopsis Description

RPP13Disease resistance protein RPP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M667]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.