Factsheet for VIT_06s0004g03100.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:

nucleus 1
plasma membrane 3
mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, plastid
Any Predictor:	mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
PTS1:	peroxisome
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22922	Soybean	endoplasmic reticulum	56.94	73.84
KRH24908	Soybean	golgi, nucleus, plasma membrane	59.51	72.1
PGSC0003DMT400077488	Potato	plasma membrane	60.52	71.82
KRG89017	Soybean	endoplasmic reticulum	71.24	71.65
Solyc06g010030.2.1	Tomato	plasma membrane	60.52	71.57
Solyc11g069220.1.1	Tomato	golgi, plasma membrane	50.5	69.76
VIT_08s0040g02170.t01	Wine grape	golgi, plasma membrane, plastid	57.51	68.95
KRH26393	Soybean	plasma membrane	54.79	66.61
KRH26395	Soybean	golgi, plasma membrane	54.79	65.81
VIT_13s0019g04060.t01	Wine grape	plasma membrane	50.64	65.68
GSMUA_Achr8P11320_001	Banana	plasma membrane	52.5	65.07
GSMUA_Achr4P04380_001	Banana	cytosol, golgi, mitochondrion, plasma membrane	48.93	63.57
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, plastid	49.79	62.03
VIT_13s0019g04070.t01	Wine grape	cytosol, golgi, plasma membrane	48.21	61.83
VIT_18s0122g00910.t01	Wine grape	plasma membrane	37.91	50.19
VIT_10s0003g00410.t01	Wine grape	golgi, nucleus, plasma membrane	35.48	48.63
VIT_18s0122g00930.t01	Wine grape	peroxisome, plasma membrane, plastid	36.91	47.25
VIT_08s0040g02180.t01	Wine grape	golgi, plasma membrane	34.48	46.62
VIT_07s0031g02240.t01	Wine grape	golgi, nucleus, plasma membrane	37.34	46.36
VIT_12s0035g02190.t01	Wine grape	golgi, plasma membrane	28.61	44.84
VIT_12s0028g02970.t01	Wine grape	cytosol, golgi, peroxisome	29.33	43.43
VIT_00s0227g00140.t01	Wine grape	cytosol, golgi, plasma membrane	29.76	43.15
VIT_06s0004g03120.t01	Wine grape	mitochondrion	28.04	42.52
VIT_05s0094g01570.t01	Wine grape	cytosol, golgi, plasma membrane	29.76	41.11
VIT_19s0014g02980.t01	Wine grape	endoplasmic reticulum, plasma membrane	29.18	36.23
VIT_12s0035g00260.t01	Wine grape	plasma membrane	26.32	32.39

Protein Annotations

EntrezGene:100233065	wikigene:100233065	EntrezGene:100260422	wikigene:100260422	MapMan:23.3.1.3.2	ProteinID:ACC91292
ProteinID:ACC91292.1	ProteinID:CBI16290	ProteinID:CBI16290.3	UniProt:D7SKW2	EMBL:EU591731	EMBL:FN594951
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	EntrezGene:LOC100260422	wikigene:LOC100260422	EntrezGene:MLO13	wikigene:MLO13
InterPro:Mlo	PFAM:PF03094	PFAM:PF03911	PANTHER:PTHR31942	PANTHER:PTHR31942:SF34	InterPro:SecG/Sec61-beta/Sbh
TIGR:TC62688	TIGR:TC66422	TMHMM:TMhelix	UniParc:UPI0001BE102A	ArrayExpress:VIT_06s0004g03100	EnsemblPlantsGene:VIT_06s0004g03100
EnsemblPlants:VIT_06s0004g03100.t01	unigene:Vvi.11727	unigene:Vvi.24310	RefSeq:XP_002282216	RefSeq:XP_002282216.1	RefSeq:XP_002285035
RefSeq:XP_002285035.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6:-:3839258..3845781

Molecular Weight (calculated)

78400.1 Da

IEP (calculated)

10.098

GRAVY (calculated)

-0.018

Length

699 amino acids

Sequence
(BLAST)

001: MAGATGGRSL EQTPTWAVAV VCFVLVLISI IIEYIIHLTG KWLKKKHKRA LYEALEKVKS ELMLLGFISL LLTVGQGLIS TICISKSVAA TWHPCSKSEE
101: EKSTTTEESD TESDNRRKLL SISGFGGGSR RVLAAAGEDK CSAKGQAPFV SSDAIHQLHI FIFVLAIFHV LYCILTLALG TAKMRRWKAW EKETRTVEYQ
201: FSHDPERFRF ARETSFGRRH LSFWTNTPFL IWIVCFFRQF VRSVPKVDYF TLRHGFIMAH LAPQSHAKFD FQKYINRSLE EDFKVVVGIS PPIWFFAVLF
301: LLLNTHGWYS YLWLPFIPLI VILLVGTKLQ VIITKMGLRI QERGEVVKGV PVVQLGDDLF WFNRPRLVLY LIHFVLFQNA FQLAFFAWTW YEFGFKSCFY
401: AHTEDVVIRI SMGVIIQILC SYVTLPLYAL VTQMGSTMKP TIFHERVATA LRNWHHTAKK NIKHNKHSGL ATPMSSRPTT PSRGTSPAYL LRYYRSDMDS
501: LQASPRRSNL DMEHWETDGS PSPSHPHHGD GSSSHHNQLH QGTSLEHDRD ISAPSSSQVV PLPQPTLHQH EIDVILKYPW KFHLITLLHS TSMARGSSQS
601: QASTTATSRP GPVGMAPRGT AAATAGMRRR RVGGGSGGSS SGYGGGGSGS NMLRFYTDDA PGLKITPTVV LVMSLCFIGF VTALHVFGKI YRYKAGGGP

Best Arabidopsis Sequence Match ( AT1G61560.1 )
(BLAST)

001: MADQVKEKTL EETSTWAVAV VCFVLLLISI VIEKLIHKIG SWFKKKNKKA LYEALEKVKA ELMLMGFISL LLTIGQGYIS NICIPKNIAA SMHPCSASEE
101: ARKYGKKDVP KEDEEENLRR KLLQLVDSLI PRRSLATKGY DKCAEKGKVA FVSAYGMHQL HIFIFVLAVC HVIYCIVTYA LGKTKMRRWK KWEEETKTIE
201: YQYSHDPERF RFARDTSFGR RHLSFWSKST ITLWIVCFFR QFFRSVTKVD YLTLRHGFIM AHLAPGSDAR FDFRKYIQRS LEEDFKTIVE INPVIWFIAV
301: LFLLTNTNGL NSYLWLPFIP FIVILIVGTK LQVIITKLGL RIQEKGDVVK GTPLVQPGDH FFWFGRPRFI LFLIHLVLFT NAFQLAFFVW STYEFGLKNC
401: FHESRVDVII RISIGLLVQI LCSYVTLPLY ALVTQMGSKM KPTVFNERVA TALKSWHHTA KKNIKHGRTS ESTTPFSSRP TTPTHGSSPI HLLRNAPHKR
501: SRSVDESFAN SFSPRNSDFD SWDPESQHET AETSNSNHRS RFGEEESEKK FVSSSVELPP GPGQIRTQHE ISTISLRDFS FKR

Arabidopsis Description

MLO6MLO-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q94KB7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.