Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0087g00430.t01 | Wine grape | nucleus | 21.86 | 33.33 |
| VIT_19s0014g00880.t01 | Wine grape | cytosol | 16.74 | 21.05 |
| VIT_10s0003g01790.t01 | Wine grape | nucleus | 26.51 | 16.72 |
| VIT_04s0023g01250.t01 | Wine grape | nucleus | 23.72 | 16.14 |
| VIT_18s0001g12020.t01 | Wine grape | nucleus | 21.86 | 15.31 |
Protein Annotations
| EntrezGene:100854662 | wikigene:100854662 | MapMan:11.3.2.4 | MapMan:15.5.39 | InterPro:BES1_N | InterPro:BZR |
| ProteinID:CCB55848 | ProteinID:CCB55848.1 | UniProt:F6HLX3 | EMBL:FN595992 | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009742 | GO:GO:0009987 | EntrezGene:LOC100854662 |
| wikigene:LOC100854662 | PFAM:PF05687 | PANTHER:PTHR31506 | PANTHER:PTHR31506:SF4 | UniParc:UPI0002109B6B | ArrayExpress:VIT_10s0003g04710 |
| EnsemblPlantsGene:VIT_10s0003g04710 | EnsemblPlants:VIT_10s0003g04710.t01 | RefSeq:XP_003632998 | RefSeq:XP_003632998.1 | RefSeq:XP_003632998.2 | SEG:seg |
Description
No Description!
Coordinates
chr10:+:8385360..8386167
Molecular Weight (calculated)
22408.2 Da
IEP (calculated)
9.656
GRAVY (calculated)
-0.523
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDATAAAAM TSSGRGGGGG SGSGSGEKVR SVSDKEKTKM RERQRRSITT NIFHGLRKHG GYPLSPRADI NEVLRHLASE AGWIVDPDGT TYRHSPTPSS
101: GFASCPVCGA GKRSTASTPT SSVVLGGECS TTTSPRRFQV GDSVLSPYLA GCGGSGVGDV VTSERDIPLA LYMYGGLQHS GTTGEPSTAA VTYQQQRQLY
201: LQEARAPMTS PPRPA
101: GFASCPVCGA GKRSTASTPT SSVVLGGECS TTTSPRRFQV GDSVLSPYLA GCGGSGVGDV VTSERDIPLA LYMYGGLQHS GTTGEPSTAA VTYQQQRQLY
201: LQEARAPMTS PPRPA
001: MATDMHKLLG TSEEDDDEEM DMDVKEEDDG DRRNRDKHAA SGSSSNDEFM FQQSMQDQVG TPGGGGSRRS RPLEEKERTK LRERHRRAIT ARILGGLRRH
101: GNYNLRVRAD INDVIAALAR EAGWVVLPDG TTFPSKSQGT KPTGGSSAVA AGSSASHIAS QQTSPPALRV VSSGLRSPVE LSSCRMKGVF TPAPSPYDML
201: PIQSPELVGS VNKAEGLVGC SVDVINSKQI LEIPPNLTEQ DFSGTPYVPV YVMLPLGVIN MKCELADRDG LLKHLRILKS IHVDGVKVDC WWGIVEGHSP
301: QEYNWTGYRQ LFQMVRDLNL KIQVLMSFHE CGGNVGDDVC IPLPHWVAEI GRTNPDIYFT DREGRRNPEC LSWGIDKERI LRGRTALEVY FDYMRSFRIE
401: LAEFLEDGVI SMVEIGLGPC GELRYPSCPI KHGWRYPGVG EFQCYDKYLS KSLRKAAESR GHLFWARGPD NTGSYNSQPQ GTGFFCDGGD YDGLYGRFFL
501: KWYSQVLIDH ADQILCLAKL VFDSSCIAAK LPDVHWWYRT ASHAAELTAG FYNPSNRDGY SAIASTLKKH GATLSFVSGE VQVLNRPDDF SGALGEPEAV
601: AWQVLNAAWD SGTPVARENS LACHDRVGYN KMLESVKFRN DPDRKHLSSF AYSRLVPALM EGHNIVEFER FVKKLHGEAV MNHHHHHHQQ V
101: GNYNLRVRAD INDVIAALAR EAGWVVLPDG TTFPSKSQGT KPTGGSSAVA AGSSASHIAS QQTSPPALRV VSSGLRSPVE LSSCRMKGVF TPAPSPYDML
201: PIQSPELVGS VNKAEGLVGC SVDVINSKQI LEIPPNLTEQ DFSGTPYVPV YVMLPLGVIN MKCELADRDG LLKHLRILKS IHVDGVKVDC WWGIVEGHSP
301: QEYNWTGYRQ LFQMVRDLNL KIQVLMSFHE CGGNVGDDVC IPLPHWVAEI GRTNPDIYFT DREGRRNPEC LSWGIDKERI LRGRTALEVY FDYMRSFRIE
401: LAEFLEDGVI SMVEIGLGPC GELRYPSCPI KHGWRYPGVG EFQCYDKYLS KSLRKAAESR GHLFWARGPD NTGSYNSQPQ GTGFFCDGGD YDGLYGRFFL
501: KWYSQVLIDH ADQILCLAKL VFDSSCIAAK LPDVHWWYRT ASHAAELTAG FYNPSNRDGY SAIASTLKKH GATLSFVSGE VQVLNRPDDF SGALGEPEAV
601: AWQVLNAAWD SGTPVARENS LACHDRVGYN KMLESVKFRN DPDRKHLSSF AYSRLVPALM EGHNIVEFER FVKKLHGEAV MNHHHHHHQQ V
Arabidopsis Description
BAM7Beta-amylase 7 [Source:UniProtKB/Swiss-Prot;Acc:O80831]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.