Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P17400_001 | Banana | mitochondrion | 45.34 | 41.95 |
| VIT_08s0032g01040.t01 | Wine grape | mitochondrion, nucleus | 46.08 | 25.07 |
| VIT_04s0008g05510.t01 | Wine grape | nucleus | 33.09 | 22.65 |
Protein Annotations
| ArrayExpress:VIT_13s0019g03570 | EMBL:FN595998 | EnsemblPlants:VIT_13s0019g03570.t01 | EnsemblPlantsGene:VIT_13s0019g03570 | EntrezGene:100246256 | EntrezGene:LOC100246256 |
| PANTHER:PTHR31182 | PANTHER:PTHR31182:SF2 | ProteinID:CCB56225 | ProteinID:CCB56225.1 | RefSeq:XP_002275579 | RefSeq:XP_002275579.2 |
| SEG:seg | UniParc:UPI000210A744 | UniProt:F6HNK6 | wikigene:100246256 | wikigene:LOC100246256 | MapMan:35.2 |
Description
No Description!
Coordinates
chr13:-:4738916..4740142
Molecular Weight (calculated)
46891.3 Da
IEP (calculated)
5.391
GRAVY (calculated)
-0.573
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNLLSSDTA CENFNNKKDE NWDAGDPLNY QVKQKPSLIR LLSWNKCNHS FRVPNFPRGT PLLNKANGED GGDDIDNDRR CQLASSQARC SQGESDSGSC
101: AFTGSDRFEI GTWEKRKLVS RDGKLELETE IFLASIDQRS ERASGEGACT VLAVTIADWL HQNPEILPLR CQLDKLVREG SSEWRNLCES VVHMKEFLDQ
201: HFDLDTVLQE QVRPLTVIPE KSYVGFFELE NMPNRLEFLK GAMSFDSIWE ELGRRERTIE EEIYIVSWND HFFVLKVEVN VIYIIDTLGE RLFEGCNKAF
301: ILKFNIESKI FKAPRERRKR EVNSEAITEN HSTNAGEEDE TSHRELVCQG KSTCKEFIKG FLAALPLREL QADIEKKIIG EAPLHHLLQI EFHHTAPCNR
401: NSHIKRWS
101: AFTGSDRFEI GTWEKRKLVS RDGKLELETE IFLASIDQRS ERASGEGACT VLAVTIADWL HQNPEILPLR CQLDKLVREG SSEWRNLCES VVHMKEFLDQ
201: HFDLDTVLQE QVRPLTVIPE KSYVGFFELE NMPNRLEFLK GAMSFDSIWE ELGRRERTIE EEIYIVSWND HFFVLKVEVN VIYIIDTLGE RLFEGCNKAF
301: ILKFNIESKI FKAPRERRKR EVNSEAITEN HSTNAGEEDE TSHRELVCQG KSTCKEFIKG FLAALPLREL QADIEKKIIG EAPLHHLLQI EFHHTAPCNR
401: NSHIKRWS
001: MVVKMMKWRP WPPLVTRKYE VKLSVKKLEG WDLVREGVPE KDRLTVEIRW KGPKATLGSL RRSVKRNFTK EAVGESDVVS WEDEEFQSLC SLTSYKDSLF
101: YPWEITFSVF TNGMKQGQKN KAPVVGTAFL NLAEYACVTD KKEFDINIPL TLSACVASET HPLLFVSLSL LELRTTPETS DSAAQTAVVP LPLPSPSPQQ
201: PTETHSVEKE DVSAIKAGLR KVKIFTEFVS TRKAKKACRE EEGRFSSFES SESLDDFETD FDEGKEELMS MRKSFSYGPL SYANGVGTSL NCGAKVSDED
301: EDWVYYSHRK SDVGAGCSDA EDSAAGLVYE ASLLPRRSIL PWRKRKLSFR SPKSKGEPLL KKDNGEEGGD DIDFDRRQLS SDEAHPPFGS KIDEDSSANP
401: RTSFSEFGED SFAIGSWEEK EVISRDGHMK LQTSVFLASI DQRSERAAGE SACTALVAVI ADWFQKNGNL MPIKSQFDSL IREGSLEWRN LCENETYMQK
501: FPDKHFDLDT VLQAKIRPLT VIPGKSFVGF FHPDGMINEG RFEFLQGAMS FDSIWAEIIS LEESSANGDS YDDDSPPHVY IVSWNDHFFV LKVEKEAYYI
601: IDTLGERLYE GCDQAYVLKF DHKTVIHKIL HTEEAGSESE PESEILSRGK ESCKEYIKNF LAAIPIRELQ EDIKKGLAST APVHHRLQIE FHYTTNAEIT
701: SL
101: YPWEITFSVF TNGMKQGQKN KAPVVGTAFL NLAEYACVTD KKEFDINIPL TLSACVASET HPLLFVSLSL LELRTTPETS DSAAQTAVVP LPLPSPSPQQ
201: PTETHSVEKE DVSAIKAGLR KVKIFTEFVS TRKAKKACRE EEGRFSSFES SESLDDFETD FDEGKEELMS MRKSFSYGPL SYANGVGTSL NCGAKVSDED
301: EDWVYYSHRK SDVGAGCSDA EDSAAGLVYE ASLLPRRSIL PWRKRKLSFR SPKSKGEPLL KKDNGEEGGD DIDFDRRQLS SDEAHPPFGS KIDEDSSANP
401: RTSFSEFGED SFAIGSWEEK EVISRDGHMK LQTSVFLASI DQRSERAAGE SACTALVAVI ADWFQKNGNL MPIKSQFDSL IREGSLEWRN LCENETYMQK
501: FPDKHFDLDT VLQAKIRPLT VIPGKSFVGF FHPDGMINEG RFEFLQGAMS FDSIWAEIIS LEESSANGDS YDDDSPPHVY IVSWNDHFFV LKVEKEAYYI
601: IDTLGERLYE GCDQAYVLKF DHKTVIHKIL HTEEAGSESE PESEILSRGK ESCKEYIKNF LAAIPIRELQ EDIKKGLAST APVHHRLQIE FHYTTNAEIT
701: SL
Arabidopsis Description
F26K24.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF22]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.