Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 75.0 | 53.33 |
| VIT_18s0001g05810.t01 | Wine grape | cytosol | 87.5 | 25.0 |
| VIT_12s0035g01210.t01 | Wine grape | mitochondrion | 81.25 | 23.21 |
| Os01t0885000-01 | Rice | cytosol | 65.62 | 18.92 |
Protein Annotations
| Gene3D:1.10.760.10 | MapMan:35.2 | ProteinID:CCB58736 | ProteinID:CCB58736.1 | InterPro:Cyt_c-like_dom_sf | InterPro:Cyt_c_1A/1B |
| UniProt:F6HVM3 | EMBL:FN596257 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005758 | GO:GO:0006091 |
| GO:GO:0006122 | GO:GO:0006123 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 |
| GO:GO:0009987 | GO:GO:0020037 | InterPro:IPR036909 | PRINTS:PR00604 | PANTHER:PTHR11961 | PANTHER:PTHR11961:SF9 |
| SUPFAM:SSF46626 | UniParc:UPI00015CC123 | ArrayExpress:VIT_13s0106g00090 | EnsemblPlantsGene:VIT_13s0106g00090 | EnsemblPlants:VIT_13s0106g00090.t01 | : |
Description
No Description!
Coordinates
chr13:+:9436494..9436792
Molecular Weight (calculated)
3620.6 Da
IEP (calculated)
10.238
GRAVY (calculated)
-0.113
Length
32 amino acids
Sequence
(BLAST)
(BLAST)
1: MQYIPGTKMV FPGLKKPQER ADLIAYLKQA IA
001: MASFDEAPPG NAKAGEKIFR TKCAQCHTVE AGAGHKQGPN LNGLFGRQSG TTAGYSYSAA NKNKAVEWEE KALYDYLLNP KKYIPGTKMV FPGLKKPQDR
101: ADLIAYLKES TAPK
101: ADLIAYLKES TAPK
Arabidopsis Description
CYTC-1CYTC-1 [Source:UniProtKB/TrEMBL;Acc:A0A178W284]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.