Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_05s0020g00290.t01 | Wine grape | endoplasmic reticulum | 57.14 | 12.12 |
| VIT_05s0020g00170.t01 | Wine grape | nucleus | 60.71 | 5.92 |
| VIT_05s0077g00460.t01 | Wine grape | cytosol | 60.71 | 4.51 |
| VIT_05s0020g00310.t01 | Wine grape | cytosol, nucleus | 14.29 | 0.96 |
| Solyc01g057840.2.1 | Tomato | nucleus | 1.19 | 0.17 |
| PGSC0003DMT400003105 | Potato | plastid | 0.0 | 0.0 |
| VIT_05s0020g00120.t01 | Wine grape | nucleus | 0.0 | 0.0 |
| VIT_05s0020g00250.t01 | Wine grape | nucleus | 0.0 | 0.0 |
| VIT_05s0020g00320.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:VIT_15s0045g00300 | EMBL:FN596510 | EnsemblPlants:VIT_15s0045g00300.t01 | EnsemblPlantsGene:VIT_15s0045g00300 | ProteinID:CCB60748 | ProteinID:CCB60748.1 |
| UniParc:UPI000210AA9D | UniProt:F6I1D1 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr15:+:5012760..5013392
Molecular Weight (calculated)
8920.7 Da
IEP (calculated)
9.171
GRAVY (calculated)
-0.367
Length
84 amino acids
Sequence
(BLAST)
(BLAST)
1: MEAHAKVVCS GGGHILNIGF EMGHEKWGSR KGVKSSDPSK NTNDGARTKQ ATLKIVLGAE LGYGPTLSEH IILDASLIPN TKSY
001: MRFFYCFSIC NASFALFCPA MEEADQLCLA AKSGDLKKVQ TLIYSGADVT HFDNDGLTPL MHAAKIGNAE IVTALLESGA PWNALSPSNL SAGDFAMEAG
101: HQETFDLLLK TGIQSELILG TIARNQTKNE YSNQEYLQDR VSFSEDKLMD SESKGVMMAW EKPLMEAHAK AICLNGGHIL NVGFGMGLVD TAIQRYNPVK
201: HTIIEAHPEV YKRMIESGWG EKENVKIVFG RWQDVLDKLD DNSFDGIFFD TYGEYYEDLR EFHQHLPRLL KPDGVYSYFN GFCGSNAFFH VVYCNLVTLE
301: IENLGFSTQL IPLPVKDCLG DEVWEGVKQK YWQLDTYYLP VCQFSD
101: HQETFDLLLK TGIQSELILG TIARNQTKNE YSNQEYLQDR VSFSEDKLMD SESKGVMMAW EKPLMEAHAK AICLNGGHIL NVGFGMGLVD TAIQRYNPVK
201: HTIIEAHPEV YKRMIESGWG EKENVKIVFG RWQDVLDKLD DNSFDGIFFD TYGEYYEDLR EFHQHLPRLL KPDGVYSYFN GFCGSNAFFH VVYCNLVTLE
301: IENLGFSTQL IPLPVKDCLG DEVWEGVKQK YWQLDTYYLP VCQFSD
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q2V2U9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.