Factsheet for VIT_19s0015g01260.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0042g00970.t01	Wine grape	cytosol	5.71	5.11
VIT_08s0056g01570.t01	Wine grape	cytosol, extracellular	12.24	3.92
VIT_06s0009g01080.t01	Wine grape	plastid	11.43	3.48

Protein Annotations

KEGG:00270+2.1.1.14	KEGG:00450+2.1.1.14	Gene3D:3.20.20.210	MapMan:35.2	ProteinID:CBI39808	ProteinID:CBI39808.3
UniProt:D7UAP3	EMBL:FN596747	GO:GO:0003674	GO:GO:0003824	GO:GO:0003871	GO:GO:0005488
GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0008705	GO:GO:0009058	GO:GO:0009086
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0032259	GO:GO:0050667
InterPro:IPR038071	InterPro:Met_Synth_C/arc	PFAM:PF01717	PANTHER:PTHR30519	PANTHER:PTHR30519:SF11	SUPFAM:SSF51726
TMHMM:TMhelix	UniParc:UPI0001BE5433	InterPro:UROD/MetE-like_sf	ArrayExpress:VIT_19s0015g01260	EnsemblPlantsGene:VIT_19s0015g01260	EnsemblPlants:VIT_19s0015g01260.t01

Description

No Description!

Coordinates

chr19:+:9421066..9425262

Molecular Weight (calculated)

28204.1 Da

IEP (calculated)

10.240

GRAVY (calculated)

0.085

Length

245 amino acids

Sequence
(BLAST)

001: MTDQYSLIKN ESVIENKWKR RRITYCYLGV FGEEKFDMGL EKQWLSIFGE QLSGFDSTIN KQVQSYESLY AKSLIIYGVV SQSKALIVLW FLMVQSMAKR
101: LMKGMLTEHG HHSTFTTAHL PFIIISPTMP SNPPSFRFYY FPHTGRLRGK ICLGAPPIMG IVLTTKTSTR LNLNWLVGRL ISFAMIRLEH MAWTHILRMV
201: ERGLGNPQVK YRIGHVTCTL SCTYQFIRVG LVCTHIGMEI IVKKL

Best Arabidopsis Sequence Match ( AT5G17920.2 )
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKST AEDLQKVSAD LRSSIWKQMS AAGTKFIPSN TFAHYDQVLD TTAMLGAVPP RYGYTGGEIG LDVYFSMARG
101: NASVPAMEMT KWFDTNYHYI VPELGPEVNF SYASHKAVNE YKEAKALGVD TVPVLVGPVS YLLLSKAAKG VDKSFELLSL LPKILPIYKE VITELKAAGA
201: TWIQLDEPVL VMDLEGQKLQ AFTGAYAELE STLSGLNVLV ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTLDLVKA GFPEGKYLFA GVVDGRNIWA
301: NDFAASLSTL QALEGIVGKD KLVVSTSCSL LHTAVDLINE TKLDDEIKSW LAFAAQKVVE VNALAKALAG QKDEALFSAN AAALASRRSS PRVTNEGVQK
401: AAAALKGSDH RRATNVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKVSE EDYVKAIKEE IKKVVDLQEE LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKAMTV FWSAMAQSMT SRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG
601: VIQIDEAALR EGLPLRKSEH AFYLDWAVHS FRITNCGVQD STQIHTHMCY SHFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSSEE IADRVNKMLA VLEQNILWVN PDCGLKTRKY TEVKPALKNM VDAAKLIRSQ LASAK

Arabidopsis Description

MS15-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O50008]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.