Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_19s0093g00430.t01 | Wine grape | cytosol, peroxisome, plastid | 48.99 | 58.76 |
| KRH22109 | Soybean | plastid | 24.04 | 25.97 |
| GSMUA_Achr2P13780_001 | Banana | cytosol | 22.02 | 23.84 |
Protein Annotations
| EntrezGene:104877721 | MapMan:35.1 | ProteinID:CCB57196 | ProteinID:CCB57196.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom |
| UniProt:F6HR88 | InterPro:FBD | EMBL:FN596009 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001810 | InterPro:Leu-rich_rpt_2 | PFAM:PF00646 | PFAM:PF07723 | PFAM:PF08387 | PANTHER:PTHR32212 |
| PANTHER:PTHR32212:SF234 | SMART:SM00579 | SUPFAM:SSF52047 | SUPFAM:SSF81383 | UniParc:UPI0002108597 | ArrayExpress:VIT_19s0093g00500 |
| EnsemblPlantsGene:VIT_19s0093g00500 | EnsemblPlants:VIT_19s0093g00500.t01 | RefSeq:XP_010644815.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr19:+:17498253..17500391
Molecular Weight (calculated)
51018.0 Da
IEP (calculated)
4.454
GRAVY (calculated)
-0.081
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSTYGKSRD RISNLPDAVL CHIISFLPTK FAVGTSVLSK RWRYLWASIP NLDFDDDLLL DRDKPIGDSE RSICFKNFVD KVLLHGSISC IRKFRLKCSD
101: HELDSAVNSW ICTALERNVQ ELDLYFDTEY PIELPPKFFF CKTLVVLKLS FSIFLDIPSL IWFPSLKVLH LRSVEFSTDD SAQKLLSSCP VLEELVIERW
201: RLDEQWVFNV SAPTLKSLAI YFSVDGLACI AEREDELVDE LDNELLVVPQ VGPEDESEDE AEDEPEDQKY KLVVDAPNLE YLSITDFVSE DYLMSNLSSL
301: VKAYVNVGPT IRGIDDQILY RGRIYELLRG ISNVKHLSLS GETLHVNKDE CEIEEWTLPL QVPTCVELHL NEVEIKKFDG LDYELGAIEF LLKNARVLKK
401: MSIDCRDWRD GQEFCVCKKL SGFTRASMSC EFSVFCHCGG IRMFS
101: HELDSAVNSW ICTALERNVQ ELDLYFDTEY PIELPPKFFF CKTLVVLKLS FSIFLDIPSL IWFPSLKVLH LRSVEFSTDD SAQKLLSSCP VLEELVIERW
201: RLDEQWVFNV SAPTLKSLAI YFSVDGLACI AEREDELVDE LDNELLVVPQ VGPEDESEDE AEDEPEDQKY KLVVDAPNLE YLSITDFVSE DYLMSNLSSL
301: VKAYVNVGPT IRGIDDQILY RGRIYELLRG ISNVKHLSLS GETLHVNKDE CEIEEWTLPL QVPTCVELHL NEVEIKKFDG LDYELGAIEF LLKNARVLKK
401: MSIDCRDWRD GQEFCVCKKL SGFTRASMSC EFSVFCHCGG IRMFS
001: MSSKRMDSGS KDIISNLPDA LLCHVLSFLP TTEAASTSVL AKRWRFLLAF VPNLDLDNMI YDRPKMGRRK RLELRKSFKL FVDRVMALQG NAPLKKFSLR
101: CKIGSDPSRV NGWVLKVLDR GVEELDLYIA SEYEYPLPPK VLMTKTLVSL KVSGTDEFTI DVGEFFLPKL KTLHLSAISF GDEGGPPFAK LISACHALEE
201: LVMIKMMWDY WEFCSVSSPS LKRVSIDCEN IDENPKSVSF DTPNLVYLEF TDTVAVKYPK VNFDSLVEAS IGLRMTPDQV FDARDLVNRH HGYKRCKGAN
301: AADFMMGVCN VKTMYLSSEA LEVLTFCCKK AIPVFNNLIH LTVETDERVD WESLPILLKN CPNLETLIFE VPSHILFLHD LTHFFSNT
101: CKIGSDPSRV NGWVLKVLDR GVEELDLYIA SEYEYPLPPK VLMTKTLVSL KVSGTDEFTI DVGEFFLPKL KTLHLSAISF GDEGGPPFAK LISACHALEE
201: LVMIKMMWDY WEFCSVSSPS LKRVSIDCEN IDENPKSVSF DTPNLVYLEF TDTVAVKYPK VNFDSLVEAS IGLRMTPDQV FDARDLVNRH HGYKRCKGAN
301: AADFMMGVCN VKTMYLSSEA LEVLTFCCKK AIPVFNNLIH LTVETDERVD WESLPILLKN CPNLETLIFE VPSHILFLHD LTHFFSNT
Arabidopsis Description
F-box/RNI-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSN3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.