Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G077570.1 | Barley | nucleus | 41.38 | 46.45 |
| TraesCS2B01G329000.1 | Wheat | nucleus | 40.23 | 45.45 |
| TraesCS2D01G310500.1 | Wheat | nucleus | 39.08 | 45.33 |
| Zm00001d025485_P001 | Maize | nucleus | 41.95 | 45.06 |
| TraesCS2A01G312200.1 | Wheat | nucleus | 39.08 | 44.74 |
| TraesCS4B01G345000.1 | Wheat | nucleus | 32.76 | 43.85 |
| TraesCS5A01G542800.1 | Wheat | nucleus | 30.46 | 43.8 |
| GSMUA_Achr4P11520_001 | Banana | nucleus | 24.14 | 41.58 |
| Os04t0444100-00 | Rice | nucleus | 41.38 | 41.14 |
| TraesCS4D01G340000.1 | Wheat | nucleus | 29.89 | 40.31 |
| GSMUA_Achr9P22830_001 | Banana | cytosol, mitochondrion, nucleus | 27.59 | 40.0 |
| GSMUA_Achr9P19640_001 | Banana | nucleus | 27.01 | 36.72 |
| GSMUA_Achr2P04940_001 | Banana | nucleus | 25.86 | 34.09 |
| Zm00001d005786_P001 | Maize | nucleus | 24.14 | 30.66 |
| Zm00001d005787_P001 | Maize | nucleus | 24.14 | 30.66 |
| Zm00001d005788_P001 | Maize | nucleus | 23.56 | 30.37 |
| Zm00001d020577_P001 | Maize | nucleus | 22.99 | 28.37 |
| Zm00001d020573_P001 | Maize | nucleus | 24.14 | 27.45 |
| Zm00001d020574_P001 | Maize | nucleus | 24.14 | 27.45 |
| Zm00001d020575_P001 | Maize | nucleus | 24.14 | 27.45 |
Protein Annotations
| EnsemblPlants:Zm00001d003573_P001 | EnsemblPlants:Zm00001d003573_T001 | EnsemblPlantsGene:Zm00001d003573 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF311 | PFscan:PS50157 | ProteinID:ONM17169.1 |
| ScanProsite:PS00028 | SEG:seg | UniParc:UPI00084291F7 | UniProt:A0A1D6E9U8 | MapMan:15.5.15 | : |
Description
C2H2 zinc finger malformed spikelet; OSJNBa0058G03.3 protein; protein
Coordinates
chr2:-:48536798..48537322
Molecular Weight (calculated)
18455.5 Da
IEP (calculated)
8.684
GRAVY (calculated)
-0.763
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MADRRLLASC IPGMEAAAER EDEGLELSLS LHPSSPSSPP RFQAVFACCY CPRKFRSSQA LGGHQNAHKL QRNLARRGRE ATSAPPAPPP PPPVADQGIG
101: RASGSDSAPP PRSRVEPAAA GAWGEGRHHH HRRPHQHHLY QQRPAPAGGA EASSGASRGG GEDAEEIIDL SLKL
101: RASGSDSAPP PRSRVEPAAA GAWGEGRHHH HRRPHQHHLY QQRPAPAGGA EASSGASRGG GEDAEEIIDL SLKL
001: MDYQPNTSLR LSLPSYKNHQ LNLELVLEPS SMSSSSSSST NSSSCLEQPR VFSCNYCQRK FYSSQALGGH QNAHKLERTL AKKSRELFRS SNTVDSDQPY
101: PFSGRFELYG RGYQGFLESG GSRDFSARRV PESGLDQDQE KSHLDLSLRL
101: PFSGRFELYG RGYQGFLESG GSRDFSARRV PESGLDQDQE KSHLDLSLRL
Arabidopsis Description
ZFP2Zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39261]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.