Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P11520_001 | Banana | nucleus | 44.17 | 52.48 |
| GSMUA_Achr2P04940_001 | Banana | nucleus | 50.83 | 46.21 |
| GSMUA_Achr10P... | Banana | nucleus | 45.83 | 38.46 |
| GSMUA_Achr9P19640_001 | Banana | nucleus | 40.83 | 38.28 |
| TraesCS5A01G542800.1 | Wheat | nucleus | 34.17 | 33.88 |
| TraesCS4D01G340000.1 | Wheat | nucleus | 35.0 | 32.56 |
| TraesCS2D01G310500.1 | Wheat | nucleus | 39.17 | 31.33 |
| TraesCS4B01G345000.1 | Wheat | nucleus | 33.33 | 30.77 |
| TraesCS2B01G329000.1 | Wheat | nucleus | 39.17 | 30.52 |
| Os04t0444100-00 | Rice | nucleus | 44.17 | 30.29 |
| TraesCS2A01G312200.1 | Wheat | nucleus | 38.33 | 30.26 |
| Zm00001d025485_P001 | Maize | nucleus | 40.83 | 30.25 |
| HORVU2Hr1G077570.1 | Barley | nucleus | 37.5 | 29.03 |
| Zm00001d003573_P001 | Maize | nucleus | 40.0 | 27.59 |
| KXG26384 | Sorghum | nucleus | 39.17 | 26.26 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P22830_001 | EnsemblPlants:GSMUA_Achr9T22830_001 | EnsemblPlantsGene:GSMUA_Achr9G22830_001 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF311 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | UniParc:UPI0002948851 | UniProt:M0U2P2 |
| MapMan:15.5.15 | : | : | : | : | : |
Description
Putative Zinc finger protein 2 [Source:GMGC_GENE;Acc:GSMUA_Achr9G22830_001]
Coordinates
chr9:-:27883455..27883817
Molecular Weight (calculated)
13378.6 Da
IEP (calculated)
6.679
GRAVY (calculated)
-0.867
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFEEKKDEE LNLELGLEPS SPPEPERMFR CTYCRRKFHS SQALGGHQNA HKLERSITRR RWELAAAAAA AARPARSTSS NHAAARVGVH EGREQGVADD
101: NGGLDDKVRL GDEIDLSLRL
101: NGGLDDKVRL GDEIDLSLRL
001: MDYQPNTSLR LSLPSYKNHQ LNLELVLEPS SMSSSSSSST NSSSCLEQPR VFSCNYCQRK FYSSQALGGH QNAHKLERTL AKKSRELFRS SNTVDSDQPY
101: PFSGRFELYG RGYQGFLESG GSRDFSARRV PESGLDQDQE KSHLDLSLRL
101: PFSGRFELYG RGYQGFLESG GSRDFSARRV PESGLDQDQE KSHLDLSLRL
Arabidopsis Description
ZFP2Zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39261]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.