Factsheet for GSMUA_Achr10P30780_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P11520_001	Banana	nucleus	38.46	54.46
GSMUA_Achr9P22830_001	Banana	cytosol, mitochondrion, nucleus	38.46	45.83
TraesCS5B01G216300.1	Wheat	nucleus	37.76	43.55
TraesCS5A01G217400.1	Wheat	nucleus	37.76	43.55
HORVU5Hr1G063360.1	Barley	nucleus	37.76	43.55
TraesCS5D01G225500.1	Wheat	nucleus	37.06	42.74
GSMUA_Achr2P04940_001	Banana	nucleus	39.16	42.42
GSMUA_Achr9P19640_001	Banana	nucleus	37.76	42.19
TraesCS7D01G527900.1	Wheat	nucleus	31.47	40.18
TraesCS4A01G412000.1	Wheat	nucleus	29.37	40.0
TraesCS5A01G526100.1	Wheat	nucleus	33.57	39.67
EER92201	Sorghum	nucleus	34.27	39.52
Os09t0431750-00	Rice	nucleus	37.06	39.26
TraesCS7A01G541700.1	Wheat	nucleus	30.07	39.09
TraesCS7A01G542100.1	Wheat	nucleus	30.07	39.09
TraesCS7A01G541800.1	Wheat	nucleus	29.37	38.89
TraesCSU01G148600.1	Wheat	nucleus	32.87	38.21
HORVU7Hr1G118510.1	Barley	nucleus	29.37	38.18
KXG39278	Sorghum	nucleus	34.97	38.17
TraesCS7B01G464100.1	Wheat	nucleus	28.67	37.96
TraesCS7D01G528100.1	Wheat	nucleus	28.67	37.96
TraesCS7D01G528200.1	Wheat	nucleus	28.67	37.27
TraesCS4B01G369800.1	Wheat	nucleus	31.47	36.59
TraesCS7B01G464000.1	Wheat	nucleus	27.97	36.36
TraesCS7B01G464300.1	Wheat	nucleus	27.97	36.36
Zm00001d020577_P001	Maize	nucleus	35.66	36.17
HORVU7Hr1G118490.1	Barley	nucleus	29.37	35.59
TraesCS7D01G528000.1	Wheat	nucleus	30.07	35.54
HORVU4Hr1G087980.1	Barley	nucleus	30.77	35.2
OQU92525	Sorghum	nucleus	36.36	35.14
Zm00001d005787_P001	Maize	nucleus	33.57	35.04
Zm00001d005786_P001	Maize	nucleus	33.57	35.04
Os09t0429766-00	Rice	cytosol	27.27	34.82
TraesCSU01G237400.1	Wheat	nucleus	32.17	34.33
TraesCS7B01G463800.1	Wheat	nucleus	28.67	33.88
TraesCS5A01G492800.1	Wheat	nucleus	30.77	33.85
TraesCS4D01G269600.1	Wheat	nucleus	31.47	33.83
TraesCS4B01G319400.1	Wheat	nucleus	30.07	33.59
TraesCSU01G070100.1	Wheat	nucleus	30.07	33.59
TraesCS4A01G037300.1	Wheat	nucleus	30.77	33.59
TraesCSU01G166500.1	Wheat	nucleus	31.47	33.58
OQU92524	Sorghum	cytosol	32.17	33.58
TraesCS7A01G541900.1	Wheat	nucleus	27.27	33.33
TraesCS4D01G309800.1	Wheat	nucleus	29.37	33.33
TraesCS5A01G492600.1	Wheat	nucleus	32.87	33.33
TraesCS7A01G542300.1	Wheat	nucleus	27.27	33.05
EER98944	Sorghum	nucleus	36.36	32.91
TraesCS7D01G527800.1	Wheat	nucleus	24.48	32.71
Zm00001d020575_P001	Maize	nucleus	34.97	32.68
Zm00001d020574_P001	Maize	nucleus	34.97	32.68
Zm00001d020573_P001	Maize	nucleus	34.97	32.68
Zm00001d005788_P001	Maize	nucleus	30.77	32.59
TraesCS4B01G319500.1	Wheat	nucleus	31.47	32.37
TraesCS7A01G542400.1	Wheat	nucleus	26.57	32.2
Os09t0430600-00	Rice	nucleus	33.57	31.58
TraesCS4D01G316100.1	Wheat	nucleus	30.77	31.43
TraesCS4D01G316000.1	Wheat	nucleus	30.07	31.16
TraesCS7A01G541600.1	Wheat	nucleus	24.48	29.91
TraesCS7B01G463900.1	Wheat	nucleus	25.17	29.03
TraesCS5A01G217500.1	Wheat	nucleus	30.77	28.57
TraesCSU01G148500.1	Wheat	nucleus	27.97	28.37
TraesCS5B01G216400.1	Wheat	nucleus	29.37	27.63
TraesCS5B01G216500.1	Wheat	nucleus	29.37	27.63
EER98945	Sorghum	nucleus	34.97	27.47
Os09t0431900-00	Rice	nucleus	32.17	27.06
HORVU5Hr1G063390.1	Barley	nucleus	27.97	26.67
TraesCS5D01G225600.1	Wheat	nucleus	27.27	25.66
TraesCS5A01G492700.1	Wheat	nucleus	31.47	24.86
HORVU4Hr1G083170.1	Barley	nucleus, plastid	27.27	22.03
TraesCS7B01G464200.1	Wheat	nucleus	29.37	21.0
HORVU7Hr1G118500.1	Barley	nucleus	26.57	20.0
TraesCS7A01G542200.1	Wheat	nucleus	27.27	16.81

Protein Annotations

EnsemblPlants:GSMUA_Achr10P30780_001	EnsemblPlants:GSMUA_Achr10T30780_001	EnsemblPlantsGene:GSMUA_Achr10G30780_001	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374	PANTHER:PTHR26374:SF311
PFscan:PS50157	ScanProsite:PS00028	SUPFAM:SSF57667	UniParc:UPI0002951144	UniProt:M0RMV2	MapMan:15.5.15

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G30780_001]

Coordinates

chr10:-:33024000..33024431

Molecular Weight (calculated)

16227.3 Da

IEP (calculated)

7.214

GRAVY (calculated)

-0.631

Length

143 amino acids

Sequence
(BLAST)

001: MEVELEAYDL NLELALQPMS PPEPQRFFSC HYCNRKFYSS QALGGHQNAH KLERSLAKRR REMPTAVGPH AGMSLAGVGD GSAFGRHSMV EFMKEHYSRH
101: DVGLGKVTTV AWRETTEQKW WGFYGPLEDK GKTAEEIDLS LKL

Best Arabidopsis Sequence Match ( AT5G57520.1 )
(BLAST)

001: MDYQPNTSLR LSLPSYKNHQ LNLELVLEPS SMSSSSSSST NSSSCLEQPR VFSCNYCQRK FYSSQALGGH QNAHKLERTL AKKSRELFRS SNTVDSDQPY
101: PFSGRFELYG RGYQGFLESG GSRDFSARRV PESGLDQDQE KSHLDLSLRL

Arabidopsis Description

ZFP2Zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39261]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.