Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G412000.1 | Wheat | nucleus | 41.98 | 52.38 |
| OQU92525 | Sorghum | nucleus | 55.73 | 49.32 |
| TraesCS7A01G541700.1 | Wheat | nucleus | 41.22 | 49.09 |
| TraesCS7D01G528200.1 | Wheat | nucleus | 41.22 | 49.09 |
| TraesCS7A01G542100.1 | Wheat | nucleus | 40.46 | 48.18 |
| TraesCS7B01G464300.1 | Wheat | nucleus | 40.46 | 48.18 |
| EER92201 | Sorghum | nucleus | 45.04 | 47.58 |
| OQU92524 | Sorghum | cytosol | 49.62 | 47.45 |
| TraesCS7D01G527900.1 | Wheat | nucleus | 40.46 | 47.32 |
| HORVU7Hr1G118510.1 | Barley | nucleus | 39.69 | 47.27 |
| TraesCS7D01G528000.1 | Wheat | nucleus | 43.51 | 47.11 |
| TraesCS7A01G541800.1 | Wheat | nucleus | 38.17 | 46.3 |
| TraesCS7D01G528100.1 | Wheat | nucleus | 38.17 | 46.3 |
| Os09t0431750-00 | Rice | nucleus | 47.33 | 45.93 |
| TraesCS7B01G464000.1 | Wheat | nucleus | 38.17 | 45.45 |
| TraesCS7B01G464100.1 | Wheat | nucleus | 36.64 | 44.44 |
| TraesCS7B01G463800.1 | Wheat | nucleus | 40.46 | 43.8 |
| TraesCS4B01G319400.1 | Wheat | nucleus | 42.75 | 43.75 |
| TraesCS4D01G309800.1 | Wheat | nucleus | 41.98 | 43.65 |
| TraesCS7A01G541900.1 | Wheat | nucleus | 38.93 | 43.59 |
| TraesCS7A01G542300.1 | Wheat | nucleus | 38.93 | 43.22 |
| TraesCS7A01G542400.1 | Wheat | nucleus | 38.93 | 43.22 |
| TraesCSU01G148600.1 | Wheat | nucleus | 40.46 | 43.09 |
| TraesCS4B01G369800.1 | Wheat | nucleus | 40.46 | 43.09 |
| TraesCS4B01G319500.1 | Wheat | nucleus | 45.04 | 42.45 |
| HORVU7Hr1G118490.1 | Barley | nucleus | 38.17 | 42.37 |
| TraesCS5A01G492600.1 | Wheat | nucleus | 45.04 | 41.84 |
| HORVU4Hr1G087980.1 | Barley | nucleus | 39.69 | 41.6 |
| EER98944 | Sorghum | nucleus | 48.85 | 40.51 |
| TraesCS7A01G541600.1 | Wheat | nucleus | 35.88 | 40.17 |
| Os09t0430600-00 | Rice | nucleus | 46.56 | 40.13 |
| TraesCS4D01G316100.1 | Wheat | nucleus | 42.75 | 40.0 |
| TraesCSU01G070100.1 | Wheat | nucleus | 38.93 | 39.84 |
| TraesCS7D01G527800.1 | Wheat | nucleus | 32.06 | 39.25 |
| TraesCS5A01G492800.1 | Wheat | nucleus | 38.93 | 39.23 |
| TraesCS4D01G316000.1 | Wheat | nucleus | 41.22 | 39.13 |
| TraesCS4A01G037300.1 | Wheat | nucleus | 38.17 | 38.17 |
| TraesCS5B01G216500.1 | Wheat | nucleus | 44.27 | 38.16 |
| TraesCS5B01G216400.1 | Wheat | nucleus | 43.51 | 37.5 |
| TraesCS7B01G463900.1 | Wheat | nucleus | 35.11 | 37.1 |
| TraesCS5A01G217500.1 | Wheat | nucleus | 43.51 | 37.01 |
| TraesCS5D01G225600.1 | Wheat | nucleus | 42.75 | 36.84 |
| TraesCS4D01G269600.1 | Wheat | nucleus | 36.64 | 36.09 |
| HORVU5Hr1G063390.1 | Barley | nucleus | 41.22 | 36.0 |
| TraesCSU01G237400.1 | Wheat | nucleus | 36.64 | 35.82 |
| TraesCSU01G166500.1 | Wheat | nucleus | 36.64 | 35.82 |
| GSMUA_Achr10P... | Banana | nucleus | 38.17 | 34.97 |
| Os09t0429766-00 | Rice | cytosol | 27.48 | 32.14 |
| TraesCS5A01G492700.1 | Wheat | nucleus | 44.27 | 32.04 |
| HORVU4Hr1G083170.1 | Barley | nucleus, plastid | 40.46 | 29.94 |
| EER98945 | Sorghum | nucleus | 41.22 | 29.67 |
| TraesCSU01G148500.1 | Wheat | nucleus | 30.53 | 28.37 |
| TraesCS7B01G464200.1 | Wheat | nucleus | 40.46 | 26.5 |
| HORVU7Hr1G118500.1 | Barley | nucleus | 35.88 | 24.74 |
| KXG26384 | Sorghum | nucleus | 32.06 | 23.46 |
| TraesCS7A01G542200.1 | Wheat | nucleus | 38.93 | 21.98 |
Protein Annotations
| EnsemblPlants:KXG39278 | EnsemblPlantsGene:SORBI_3001G356800 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF311 | PFscan:PS50157 |
| ProteinID:KXG39278 | ProteinID:KXG39278.1 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | UniParc:UPI0003C72337 |
| UniProt:A0A1B6QMX7 | MapMan:15.5.15 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:64632344..64633045
Molecular Weight (calculated)
14097.5 Da
IEP (calculated)
8.117
GRAVY (calculated)
-0.484
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MEHHHHQELD LELSLQPFSA DAAAAADDPP GFFVCTYCDR KFYSSQALGG HQNAHKYERT LAKRRREIAA AMRAHGARQV DAAAASTCSR PGGDRAPAVQ
101: SAAALLRGKS SSLERGGVER AAAELDLSLR L
101: SAAALLRGKS SSLERGGVER AAAELDLSLR L
001: MDYQPNTSLR LSLPSYKNHQ LNLELVLEPS SMSSSSSSST NSSSCLEQPR VFSCNYCQRK FYSSQALGGH QNAHKLERTL AKKSRELFRS SNTVDSDQPY
101: PFSGRFELYG RGYQGFLESG GSRDFSARRV PESGLDQDQE KSHLDLSLRL
101: PFSGRFELYG RGYQGFLESG GSRDFSARRV PESGLDQDQE KSHLDLSLRL
Arabidopsis Description
ZFP2Zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39261]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.