Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G464000.1 | Wheat | nucleus | 81.82 | 81.82 |
| HORVU7Hr1G118510.1 | Barley | nucleus | 79.09 | 79.09 |
| TraesCS7D01G527800.1 | Wheat | nucleus | 72.73 | 74.77 |
| TraesCS7B01G464100.1 | Wheat | nucleus | 50.0 | 50.93 |
| TraesCS7B01G464200.1 | Wheat | nucleus | 85.45 | 47.0 |
| TraesCS7B01G463800.1 | Wheat | nucleus | 50.0 | 45.45 |
| TraesCS7B01G463900.1 | Wheat | nucleus | 50.91 | 45.16 |
| EER92201 | Sorghum | nucleus | 50.91 | 45.16 |
| TraesCS4B01G369800.1 | Wheat | nucleus | 50.0 | 44.72 |
| KXG39278 | Sorghum | nucleus | 48.18 | 40.46 |
| OQU92524 | Sorghum | cytosol | 50.0 | 40.15 |
| TraesCS4B01G319400.1 | Wheat | nucleus | 45.45 | 39.06 |
| TraesCS4B01G319500.1 | Wheat | nucleus | 46.36 | 36.69 |
| Zm00001d005786_P001 | Maize | nucleus | 45.45 | 36.5 |
| Zm00001d005787_P001 | Maize | nucleus | 45.45 | 36.5 |
| OQU92525 | Sorghum | nucleus | 47.27 | 35.14 |
| EER98944 | Sorghum | nucleus | 50.0 | 34.81 |
| TraesCS5B01G216400.1 | Wheat | nucleus | 47.27 | 34.21 |
| TraesCS5B01G216500.1 | Wheat | nucleus | 47.27 | 34.21 |
| Zm00001d020573_P001 | Maize | nucleus | 47.27 | 33.99 |
| Zm00001d020574_P001 | Maize | nucleus | 47.27 | 33.99 |
| Zm00001d020575_P001 | Maize | nucleus | 47.27 | 33.99 |
| TraesCS5B01G216300.1 | Wheat | nucleus | 35.45 | 31.45 |
| GSMUA_Achr10P... | Banana | nucleus | 36.36 | 27.97 |
| TraesCS4B01G345000.1 | Wheat | nucleus | 31.82 | 26.92 |
| TraesCS2B01G329000.1 | Wheat | nucleus | 34.55 | 24.68 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G464300.1 | EnsemblPlantsGene:TraesCS7B01G464300 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF311 | PFscan:PS50157 |
| ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | TMHMM:TMhelix | MapMan:15.5.15 | : |
Description
No Description!
Coordinates
chr7B:-:720948185..720948517
Molecular Weight (calculated)
12169.2 Da
IEP (calculated)
7.747
GRAVY (calculated)
-0.605
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: MEHAHDELSL ELTLAAAVVA PAPGFFLCVY CHRKFRTSQA LGGHQNTHKE ERANKRRRET AAATEHAWKP ERAAAAVWVS EEPAAAGGMA HKRSTSSSER
101: DHELDLSLRL
101: DHELDLSLRL
001: MAEPPPSYLH FVGPAKTRSS SKRHSFSSSA HPASHRLFPC QYCPRKFYTS QALGGHQNAH KRERAAARRN LGVLANSPPI LDDNNTFLRP YPCFYQNPFQ
101: GSTSGNEPLQ EQPTMMTMDG YDPFHPYPYV YPFALSGNNN DGGNGVMEED EPLDLDLSLR L
101: GSTSGNEPLQ EQPTMMTMDG YDPFHPYPYV YPFALSGNNN DGGNGVMEED EPLDLDLSLR L
Arabidopsis Description
KNUZinc finger protein KNUCKLES [Source:UniProtKB/Swiss-Prot;Acc:Q9FFX4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.