Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G216500.1 | Wheat | nucleus | 96.05 | 96.05 |
| HORVU5Hr1G063390.1 | Barley | nucleus | 73.03 | 74.0 |
| TraesCS4B01G319400.1 | Wheat | nucleus | 50.66 | 60.16 |
| TraesCS4B01G369800.1 | Wheat | nucleus | 40.13 | 49.59 |
| TraesCS7B01G464300.1 | Wheat | nucleus | 34.21 | 47.27 |
| TraesCS7B01G464000.1 | Wheat | nucleus | 33.55 | 46.36 |
| TraesCS7B01G464100.1 | Wheat | nucleus | 32.24 | 45.37 |
| TraesCS4B01G319500.1 | Wheat | nucleus | 40.13 | 43.88 |
| KXG39278 | Sorghum | nucleus | 37.5 | 43.51 |
| TraesCS7B01G463800.1 | Wheat | nucleus | 34.21 | 42.98 |
| TraesCS7B01G463900.1 | Wheat | nucleus | 33.55 | 41.13 |
| EER92201 | Sorghum | nucleus | 32.89 | 40.32 |
| EER98944 | Sorghum | nucleus | 41.45 | 39.87 |
| Zm00001d005787_P001 | Maize | nucleus | 35.53 | 39.42 |
| Zm00001d005786_P001 | Maize | nucleus | 35.53 | 39.42 |
| TraesCS5B01G216300.1 | Wheat | nucleus | 31.58 | 38.71 |
| Zm00001d020573_P001 | Maize | nucleus | 38.82 | 38.56 |
| Zm00001d020574_P001 | Maize | nucleus | 38.82 | 38.56 |
| Zm00001d020575_P001 | Maize | nucleus | 38.82 | 38.56 |
| OQU92525 | Sorghum | nucleus | 34.87 | 35.81 |
| OQU92524 | Sorghum | cytosol | 32.24 | 35.77 |
| TraesCS2B01G329000.1 | Wheat | nucleus | 31.58 | 31.17 |
| GSMUA_Achr10P... | Banana | nucleus | 27.63 | 29.37 |
| TraesCS4B01G345000.1 | Wheat | nucleus | 23.68 | 27.69 |
| TraesCS7B01G464200.1 | Wheat | nucleus | 36.18 | 27.5 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G216400.1 | EnsemblPlantsGene:TraesCS5B01G216400 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF311 | PFscan:PS50157 |
| ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | MapMan:15.5.15 | : | : |
Description
No Description!
Coordinates
chr5B:+:390403065..390403523
Molecular Weight (calculated)
16465.2 Da
IEP (calculated)
7.629
GRAVY (calculated)
-0.636
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQLNWEQDE QELSLELTLR MTWAAQAEAE QGGFFLCVYC DRKFRSSQAL GGHQNAHKHE RSVAKRRRET AASTRAHGAG GAPAAAQDAR PGGYAGDSDF
101: LSADGRARKT EALKAAPPML AGMARKRGSA PSEYAYGAFE HVAGEVDLSL RL
101: LSADGRARKT EALKAAPPML AGMARKRGSA PSEYAYGAFE HVAGEVDLSL RL
001: MDYQPNTSLR LSLPSYKNHQ LNLELVLEPS SMSSSSSSST NSSSCLEQPR VFSCNYCQRK FYSSQALGGH QNAHKLERTL AKKSRELFRS SNTVDSDQPY
101: PFSGRFELYG RGYQGFLESG GSRDFSARRV PESGLDQDQE KSHLDLSLRL
101: PFSGRFELYG RGYQGFLESG GSRDFSARRV PESGLDQDQE KSHLDLSLRL
Arabidopsis Description
ZFP2Zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39261]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.