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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • plastid 3
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d020577_P001 Maize nucleus 66.48 85.82
TraesCS5A01G217400.1 Wheat nucleus 38.46 56.45
TraesCS5B01G216300.1 Wheat nucleus 38.46 56.45
TraesCS5D01G225500.1 Wheat nucleus 38.46 56.45
HORVU5Hr1G063360.1 Barley nucleus 37.91 55.65
TraesCS5A01G526100.1 Wheat nucleus 35.71 53.72
Os09t0431900-00 Rice nucleus 40.11 42.94
KXG39278 Sorghum nucleus 29.67 41.22
EER92201 Sorghum nucleus 25.82 37.9
OQU92525 Sorghum nucleus 30.77 37.84
OQU92524 Sorghum cytosol 28.02 37.23
GSMUA_Achr10P... Banana nucleus 27.47 34.97
EER98944 Sorghum nucleus 28.57 32.91
KXG26384 Sorghum nucleus 24.18 24.58
Protein Annotations
EnsemblPlants:EER98945EnsemblPlantsGene:SORBI_3002G209900EntrezGene:8060292Gene3D:3.30.160.60GO:GO:0003674GO:GO:0003676
GO:GO:0005488InterPro:IPR013087InterPro:Znf_C2H2_sfInterPro:Znf_C2H2_typePANTHER:PTHR26374PANTHER:PTHR26374:SF311
PFscan:PS50157ProteinID:EER98945ProteinID:EER98945.1RefSeq:XP_002462424.1ScanProsite:PS00028SEG:seg
SUPFAM:SSF57667UniParc:UPI0001A840A5UniProt:C5XDJ8MapMan:15.5.15::
Description
hypothetical protein
Coordinates
chr2:-:60228375..60228923
Molecular Weight (calculated)
19205.3 Da
IEP (calculated)
5.677
GRAVY (calculated)
-0.541
Length
182 amino acids
Sequence
(BLAST)
001: MVQHSTLTVI QTEANSSYSS IRSSPSFGEP AALPAVLSPA AMDPKGESAR GGGGQGEGDL DLNLSLQPTL LAPEPEPLGY FSCTYCDKKF YSSQALGGHQ
101: NAHKFERSVA KRARELAAAR RAGEGGERAS AAEEEPRMGK EMGIARSVSA PSSSSSHQIR ASPEASRNNL TDDIDIDLSL KL
Best Arabidopsis Sequence Match ( AT5G57520.1 )
(BLAST)
001: MDYQPNTSLR LSLPSYKNHQ LNLELVLEPS SMSSSSSSST NSSSCLEQPR VFSCNYCQRK FYSSQALGGH QNAHKLERTL AKKSRELFRS SNTVDSDQPY
101: PFSGRFELYG RGYQGFLESG GSRDFSARRV PESGLDQDQE KSHLDLSLRL
Arabidopsis Description
ZFP2Zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39261]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.