Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025485_P001 | Maize | nucleus | 54.19 | 59.88 |
| TraesCS4D01G340000.1 | Wheat | nucleus | 34.64 | 48.06 |
| TraesCS2B01G329000.1 | Wheat | nucleus | 40.22 | 46.75 |
| GSMUA_Achr4P11520_001 | Banana | nucleus | 26.26 | 46.53 |
| HORVU2Hr1G077570.1 | Barley | nucleus | 38.55 | 44.52 |
| TraesCS2D01G310500.1 | Wheat | nucleus | 36.87 | 44.0 |
| TraesCS2A01G312200.1 | Wheat | nucleus | 36.87 | 43.42 |
| TraesCS5A01G542800.1 | Wheat | nucleus | 28.49 | 42.15 |
| Os04t0444100-00 | Rice | nucleus | 40.78 | 41.71 |
| TraesCS4B01G345000.1 | Wheat | nucleus | 29.05 | 40.0 |
| GSMUA_Achr9P22830_001 | Banana | cytosol, mitochondrion, nucleus | 26.26 | 39.17 |
| GSMUA_Achr9P19640_001 | Banana | nucleus | 25.7 | 35.94 |
| GSMUA_Achr2P04940_001 | Banana | nucleus | 25.7 | 34.85 |
| KXG39278 | Sorghum | nucleus | 23.46 | 32.06 |
| EER92201 | Sorghum | nucleus | 21.79 | 31.45 |
| OQU92524 | Sorghum | cytosol | 23.46 | 30.66 |
| EER98944 | Sorghum | nucleus | 25.14 | 28.48 |
| OQU92525 | Sorghum | nucleus | 22.35 | 27.03 |
| EER98945 | Sorghum | nucleus | 24.58 | 24.18 |
Protein Annotations
| EnsemblPlants:KXG26384 | EnsemblPlantsGene:SORBI_3006G092300 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 |
| InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF311 | PFscan:PS50157 | ProteinID:KXG26384 | ProteinID:KXG26384.1 |
| ScanProsite:PS00028 | SEG:seg | UniParc:UPI00081AB829 | UniProt:A0A1B6PL32 | MapMan:15.5.15 | : |
Description
hypothetical protein
Coordinates
chr6:+:46252816..46254434
Molecular Weight (calculated)
19003.0 Da
IEP (calculated)
8.054
GRAVY (calculated)
-0.852
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRGMADRLL ASCIPGGMEA AAAEREDEGL ELSLSLHPSP SSPPRFQAVF ACCYCPRKFR SSQALGGHQN AHKLQRNLAR RGREAASAPP APPVSDHHQQ
101: QGSRAPGGSE SAPTPRSRPE QPPAGADAWG EGRHHRRHQH HHLYQRPPAP AGGAEASSGA SRGGGEDAAE EIIDLSLKL
101: QGSRAPGGSE SAPTPRSRPE QPPAGADAWG EGRHHRRHQH HHLYQRPPAP AGGAEASSGA SRGGGEDAAE EIIDLSLKL
001: MDYQPNTSLR LSLPSYKNHQ LNLELVLEPS SMSSSSSSST NSSSCLEQPR VFSCNYCQRK FYSSQALGGH QNAHKLERTL AKKSRELFRS SNTVDSDQPY
101: PFSGRFELYG RGYQGFLESG GSRDFSARRV PESGLDQDQE KSHLDLSLRL
101: PFSGRFELYG RGYQGFLESG GSRDFSARRV PESGLDQDQE KSHLDLSLRL
Arabidopsis Description
ZFP2Zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39261]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.