Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G319400.1 | Wheat | nucleus | 72.46 | 78.12 |
| TraesCS5A01G492800.1 | Wheat | nucleus | 60.87 | 64.62 |
| TraesCS5D01G225600.1 | Wheat | nucleus | 57.25 | 51.97 |
| HORVU4Hr1G083170.1 | Barley | nucleus, plastid | 60.87 | 47.46 |
| TraesCS7D01G528200.1 | Wheat | nucleus | 35.51 | 44.55 |
| TraesCS7D01G528000.1 | Wheat | nucleus | 36.96 | 42.15 |
| KXG39278 | Sorghum | nucleus | 39.13 | 41.22 |
| TraesCS7D01G527800.1 | Wheat | nucleus | 31.88 | 41.12 |
| OQU92524 | Sorghum | cytosol | 40.58 | 40.88 |
| TraesCS4D01G316100.1 | Wheat | nucleus | 41.3 | 40.71 |
| TraesCS4D01G309800.1 | Wheat | nucleus | 36.96 | 40.48 |
| Zm00001d005787_P001 | Maize | nucleus | 39.86 | 40.15 |
| Zm00001d005786_P001 | Maize | nucleus | 39.86 | 40.15 |
| EER92201 | Sorghum | nucleus | 35.51 | 39.52 |
| TraesCS7D01G528100.1 | Wheat | nucleus | 28.99 | 37.04 |
| TraesCS7D01G527900.1 | Wheat | nucleus | 29.71 | 36.61 |
| TraesCS4D01G269600.1 | Wheat | nucleus | 34.06 | 35.34 |
| EER98944 | Sorghum | nucleus | 39.86 | 34.81 |
| Zm00001d020573_P001 | Maize | nucleus | 37.68 | 33.99 |
| Zm00001d020574_P001 | Maize | nucleus | 37.68 | 33.99 |
| Zm00001d020575_P001 | Maize | nucleus | 37.68 | 33.99 |
| OQU92525 | Sorghum | nucleus | 36.23 | 33.78 |
| TraesCS5D01G225500.1 | Wheat | nucleus | 28.99 | 32.26 |
| GSMUA_Achr10P... | Banana | nucleus | 31.16 | 30.07 |
| TraesCS4D01G340000.1 | Wheat | nucleus | 26.81 | 28.68 |
| TraesCS2D01G310500.1 | Wheat | nucleus | 30.43 | 28.0 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G316000.1 | EnsemblPlantsGene:TraesCS4D01G316000 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF311 | PFscan:PS50157 |
| ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | MapMan:15.5.15 | : | : |
Description
No Description!
Coordinates
chr4D:+:481338664..481339080
Molecular Weight (calculated)
15001.5 Da
IEP (calculated)
7.216
GRAVY (calculated)
-0.630
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQLHSEMDE HELSLDLTLR VSPAAEAEQG GFFLCVYCDR KFRSSQALGG HQNAHKHERS LAHRRREMAA ATGAHGAGTR APAAQDERPR YVSAGDFVEA
101: SAGKAGRTEA RSTWNVAAAP MPGGMTRRAD DVDLSLRL
101: SAGKAGRTEA RSTWNVAAAP MPGGMTRRAD DVDLSLRL
001: MDASIVSSST AFPYQDSLNQ SIEDEERDVH NSSHELNLID CIDDTTSIVN ESTTSTEQKL FSCNYCQRTF YSSQALGGHQ NAHKRERTLA KRGQRMAASA
101: SAFGHPYGFS PLPFHGQYNN HRSLGIQAHS ISHKLSSYNG FGGHYGQINW SRLPFDQQPA IGKFPSMDNF HHHHHQMMMM APSVNSRSNN IDSPSNTGRV
201: LEGSPTLEQW HGDKGLLLST SHHEEQQKLD LSLKL
101: SAFGHPYGFS PLPFHGQYNN HRSLGIQAHS ISHKLSSYNG FGGHYGQINW SRLPFDQQPA IGKFPSMDNF HHHHHQMMMM APSVNSRSNN IDSPSNTGRV
201: LEGSPTLEQW HGDKGLLLST SHHEEQQKLD LSLKL
Arabidopsis Description
ZFP3ZFP3 zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q0WT56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.