Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G269600.1 | Wheat | nucleus | 77.1 | 75.94 |
| TraesCSU01G237400.1 | Wheat | nucleus | 72.52 | 70.9 |
| TraesCSU01G166500.1 | Wheat | nucleus | 71.76 | 70.15 |
| Os09t0431750-00 | Rice | nucleus | 45.04 | 43.7 |
| TraesCS7A01G542100.1 | Wheat | nucleus | 35.88 | 42.73 |
| TraesCS7A01G541700.1 | Wheat | nucleus | 35.11 | 41.82 |
| EER92201 | Sorghum | nucleus | 38.17 | 40.32 |
| TraesCS4A01G412000.1 | Wheat | nucleus | 32.06 | 40.0 |
| TraesCS7A01G541800.1 | Wheat | nucleus | 32.82 | 39.81 |
| Zm00001d005787_P001 | Maize | nucleus | 41.22 | 39.42 |
| Zm00001d005786_P001 | Maize | nucleus | 41.22 | 39.42 |
| KXG39278 | Sorghum | nucleus | 38.17 | 38.17 |
| TraesCS7A01G541900.1 | Wheat | nucleus | 33.59 | 37.61 |
| TraesCS7A01G541600.1 | Wheat | nucleus | 32.82 | 36.75 |
| TraesCS7A01G542300.1 | Wheat | nucleus | 32.82 | 36.44 |
| TraesCS7A01G542400.1 | Wheat | nucleus | 32.82 | 36.44 |
| TraesCS5A01G217400.1 | Wheat | nucleus | 34.35 | 36.29 |
| Os09t0430600-00 | Rice | nucleus | 41.98 | 36.18 |
| OQU92524 | Sorghum | cytosol | 37.4 | 35.77 |
| TraesCS5A01G492800.1 | Wheat | nucleus | 35.11 | 35.38 |
| OQU92525 | Sorghum | nucleus | 39.69 | 35.14 |
| TraesCS5A01G492600.1 | Wheat | nucleus | 36.64 | 34.04 |
| TraesCS5A01G526100.1 | Wheat | nucleus | 31.3 | 33.88 |
| TraesCS5A01G217500.1 | Wheat | nucleus | 37.4 | 31.82 |
| EER98944 | Sorghum | nucleus | 38.17 | 31.65 |
| Zm00001d020573_P001 | Maize | nucleus | 36.64 | 31.37 |
| Zm00001d020574_P001 | Maize | nucleus | 36.64 | 31.37 |
| Zm00001d020575_P001 | Maize | nucleus | 36.64 | 31.37 |
| GSMUA_Achr10P... | Banana | nucleus | 33.59 | 30.77 |
| TraesCS5A01G542800.1 | Wheat | nucleus | 28.24 | 30.58 |
| Os09t0429766-00 | Rice | cytosol | 24.43 | 28.57 |
| TraesCS5A01G492700.1 | Wheat | nucleus | 38.93 | 28.18 |
| TraesCS2A01G312200.1 | Wheat | nucleus | 30.53 | 26.32 |
| TraesCS7A01G542200.1 | Wheat | nucleus | 32.06 | 18.1 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G037300.1 | EnsemblPlantsGene:TraesCS4A01G037300 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF311 | PFscan:PS50157 | ScanProsite:PS00028 |
| SEG:seg | SUPFAM:SSF57667 | MapMan:15.5.15 | : | : | : |
Description
No Description!
Coordinates
chr4A:-:29385989..29386579
Molecular Weight (calculated)
14257.7 Da
IEP (calculated)
8.108
GRAVY (calculated)
-0.605
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MEANEDQCEL TLHSSPSSVR EPPGLFLCVY CGRSFYNSQA FGGHQNAHKE ERRLARRRGE MAAARRVHAA SLSSSAPSSH VAATAMLSAE DHAAGPAAKK
101: TRMEIQLERG RSFPEYDGAR TGDGLDLSLR L
101: TRMEIQLERG RSFPEYDGAR TGDGLDLSLR L
001: MDASIVSSST AFPYQDSLNQ SIEDEERDVH NSSHELNLID CIDDTTSIVN ESTTSTEQKL FSCNYCQRTF YSSQALGGHQ NAHKRERTLA KRGQRMAASA
101: SAFGHPYGFS PLPFHGQYNN HRSLGIQAHS ISHKLSSYNG FGGHYGQINW SRLPFDQQPA IGKFPSMDNF HHHHHQMMMM APSVNSRSNN IDSPSNTGRV
201: LEGSPTLEQW HGDKGLLLST SHHEEQQKLD LSLKL
101: SAFGHPYGFS PLPFHGQYNN HRSLGIQAHS ISHKLSSYNG FGGHYGQINW SRLPFDQQPA IGKFPSMDNF HHHHHQMMMM APSVNSRSNN IDSPSNTGRV
201: LEGSPTLEQW HGDKGLLLST SHHEEQQKLD LSLKL
Arabidopsis Description
ZFP3ZFP3 zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q0WT56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.