Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G541600.1 | Wheat | nucleus | 41.05 | 66.67 |
| TraesCS7A01G541900.1 | Wheat | nucleus | 39.47 | 64.1 |
| TraesCS7B01G463900.1 | Wheat | nucleus | 33.68 | 51.61 |
| HORVU7Hr1G118510.1 | Barley | nucleus | 25.79 | 44.55 |
| HORVU7Hr1G118490.1 | Barley | nucleus | 25.26 | 40.68 |
| EER92201 | Sorghum | nucleus | 24.21 | 37.1 |
| HORVU4Hr1G087980.1 | Barley | nucleus | 23.68 | 36.0 |
| KXG39278 | Sorghum | nucleus | 24.74 | 35.88 |
| Zm00001d005787_P001 | Maize | nucleus | 25.26 | 35.04 |
| Zm00001d005786_P001 | Maize | nucleus | 25.26 | 35.04 |
| OQU92524 | Sorghum | cytosol | 22.63 | 31.39 |
| OQU92525 | Sorghum | nucleus | 24.21 | 31.08 |
| Zm00001d020575_P001 | Maize | nucleus | 24.21 | 30.07 |
| Zm00001d020574_P001 | Maize | nucleus | 24.21 | 30.07 |
| Zm00001d020573_P001 | Maize | nucleus | 24.21 | 30.07 |
| EER98944 | Sorghum | nucleus | 23.68 | 28.48 |
| HORVU5Hr1G063360.1 | Barley | nucleus | 17.89 | 27.42 |
| HORVU5Hr1G063390.1 | Barley | nucleus | 21.58 | 27.33 |
| GSMUA_Achr10P... | Banana | nucleus | 20.0 | 26.57 |
| HORVU4Hr1G083170.1 | Barley | nucleus, plastid | 23.16 | 24.86 |
| HORVU2Hr1G077570.1 | Barley | nucleus | 17.89 | 21.94 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G118500.1 | EnsemblPlantsGene:HORVU7Hr1G118500 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF316 | PFscan:PS50157 | ScanProsite:PS00028 |
| SEG:seg | SUPFAM:SSF57667 | UniParc:UPI000B47F634 | UniProt:A0A287XZ21 | MapMan:15.5.15 | : |
Description
No Description!
Coordinates
chrchr7H:-:647771988..647772808
Molecular Weight (calculated)
20887.1 Da
IEP (calculated)
9.654
GRAVY (calculated)
-0.419
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: YARSKRLLSM AQLAVLDLTV KNSAKRNQHH PQNVRVPSKI HVPLAHLCSP DLKTMLAQLT VTHTAIREYD AQPPGASSME QASNAHDELS LELTLAAAVG
101: VEPAAPRFFL CAYCNRMFLT SQGLGGHQNA HKRERAVARL RRDAADDMRD SPAWKAATRM PKQPAAGGMA PKCGSSWPER DTELDLCLRL
101: VEPAAPRFFL CAYCNRMFLT SQGLGGHQNA HKRERAVARL RRDAADDMRD SPAWKAATRM PKQPAAGGMA PKCGSSWPER DTELDLCLRL
001: MAEPPPSYLH FVGPAKTRSS SKRHSFSSSA HPASHRLFPC QYCPRKFYTS QALGGHQNAH KRERAAARRN LGVLANSPPI LDDNNTFLRP YPCFYQNPFQ
101: GSTSGNEPLQ EQPTMMTMDG YDPFHPYPYV YPFALSGNNN DGGNGVMEED EPLDLDLSLR L
101: GSTSGNEPLQ EQPTMMTMDG YDPFHPYPYV YPFALSGNNN DGGNGVMEED EPLDLDLSLR L
Arabidopsis Description
KNUZinc finger protein KNUCKLES [Source:UniProtKB/Swiss-Prot;Acc:Q9FFX4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.