Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d023265_P010 | Maize | cytosol, vacuole | 88.88 | 89.22 |
| Zm00001d023304_P002 | Maize | cytosol | 77.95 | 77.87 |
| Zm00001d023303_P004 | Maize | cytosol, endoplasmic reticulum | 74.98 | 76.97 |
| KXG22895 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 70.28 | 63.19 |
| Zm00001d004771_P001 | Maize | cytosol | 36.24 | 36.73 |
| Zm00001d004772_P006 | Maize | cytosol | 36.15 | 36.64 |
| Zm00001d024924_P001 | Maize | cytosol | 33.75 | 35.81 |
| Zm00001d007851_P002 | Maize | cytosol | 33.46 | 35.76 |
| Zm00001d004526_P001 | Maize | endoplasmic reticulum | 32.5 | 34.14 |
| Zm00001d032376_P012 | Maize | cytosol | 33.94 | 34.1 |
| Zm00001d007457_P003 | Maize | cytosol | 30.2 | 33.3 |
| Zm00001d036280_P002 | Maize | cytosol | 29.82 | 32.7 |
| Zm00001d049770_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 29.34 | 32.18 |
| Zm00001d024973_P003 | Maize | cytosol | 31.83 | 31.56 |
| Zm00001d007456_P005 | Maize | cytosol | 21.48 | 30.9 |
| Zm00001d037650_P002 | Maize | extracellular, plasma membrane | 32.41 | 20.35 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A1D6IRB2 | ProteinID:AQK38802.1 | ProteinID:AQK38803.1 |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 |
| InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43889 |
| PANTHER:PTHR43889:SF33 | InterPro:RX-like_CC | SUPFAM:SSF52047 | SUPFAM:SSF52540 | UniParc:UPI0008441A68 | EnsemblPlantsGene:Zm00001d023267 |
| EnsemblPlants:Zm00001d023267_P002 | EnsemblPlants:Zm00001d023267_T002 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr10:-:1680859..1687111
Molecular Weight (calculated)
120039.0 Da
IEP (calculated)
5.396
GRAVY (calculated)
-0.236
Length
1043 amino acids
Sequence
(BLAST)
(BLAST)
0001: MELALGAMAS LAPKLGDLLM EEYVVQKGLK PDIESLSREL VMMNAALVDA SRVPPDQLTE VEKLWARKVR DLSYDMEDAV DDFILRVAGG DDSADDSKFF
0101: KKTLATVKDV MSMKKFKDRR QISDKVKDIK KLSNELAELR AKYTVRGVGA DLAASTGIDP RVINLYKKET DLVGIEESRD KVIRMLSMGT KDDDAHESHQ
0201: DLKIVSIVGV GGLGKTTLAK TVHDMLKKQF DCSAFISIGR TPNLNRTFEK MLLELDREHK QVDMARWDLE QFKNELDEFL KDKRYLIVVD DIWDVDSWEA
0301: IRYVLKDNNC GSRIIMTTRN SGVVTKVEEV YRLKPLSTEN SEKLFYKRIE SQEGESLDGE LSSKIIHKCG GIPLAIIAIA SLLVERSREE WPEVYDKIGL
0401: GNEDNTTKIM LYSYYDLPPY LKPCLLQLSI FPEDCFIDTK AVIWMWIGEG LVHLEKEEGS LFEVGERYFK ELVNRSMIQP IEEKYHWFVE RFCIHDIMFD
0501: LICKLSKDED FITLSGQHSS QSLQSLFNLR SDCKLRRLAV RNQRVQRFPE ETMDMPEVLR SLSIIDCNIE VMAPIDSFRV CRVLHIENNY VPISLKHLGK
0601: LLHLKFLEIF DTTIDELPRE IGHLRSLQTL VLVSTGLDEL PVAVCSLTRL MCLIAYGFER LPADRIGNLT SLEELQLHRV VGRSATQDLV AELGKLTRLR
0701: VVRITFSEQL EESSQEALVQ SLSNLRLLQE LVLFSEMPER GSDMWGDWEL PRQLRRLIIE GIVFSRQPRW INRSCLPRLY SLYLMVHAVE AQDLDNLARL
0801: PELQYLMLFG FSWPPRYTVG PDDFRNLRFC EVGTTFEFRK GAMPRLEVLR FGVCVPFEQF PTKDVIEDLD FDLDNVILLQ QVRVKVNCAG ATVTQVEEVE
0901: AVVMRAVENH ANRPTIKMDR VYEQNILSDE EREALVRLFS LNMFVYFNSQ LQRHIEKDCC VRTMKDKSDA FFISQLRRYR HLQKAIIFID CSGASMCEVQ
1001: KVEAAYRHAA EVHPNHPSIE LIRTNTDGMA SSSSDHPNTE PRN
0101: KKTLATVKDV MSMKKFKDRR QISDKVKDIK KLSNELAELR AKYTVRGVGA DLAASTGIDP RVINLYKKET DLVGIEESRD KVIRMLSMGT KDDDAHESHQ
0201: DLKIVSIVGV GGLGKTTLAK TVHDMLKKQF DCSAFISIGR TPNLNRTFEK MLLELDREHK QVDMARWDLE QFKNELDEFL KDKRYLIVVD DIWDVDSWEA
0301: IRYVLKDNNC GSRIIMTTRN SGVVTKVEEV YRLKPLSTEN SEKLFYKRIE SQEGESLDGE LSSKIIHKCG GIPLAIIAIA SLLVERSREE WPEVYDKIGL
0401: GNEDNTTKIM LYSYYDLPPY LKPCLLQLSI FPEDCFIDTK AVIWMWIGEG LVHLEKEEGS LFEVGERYFK ELVNRSMIQP IEEKYHWFVE RFCIHDIMFD
0501: LICKLSKDED FITLSGQHSS QSLQSLFNLR SDCKLRRLAV RNQRVQRFPE ETMDMPEVLR SLSIIDCNIE VMAPIDSFRV CRVLHIENNY VPISLKHLGK
0601: LLHLKFLEIF DTTIDELPRE IGHLRSLQTL VLVSTGLDEL PVAVCSLTRL MCLIAYGFER LPADRIGNLT SLEELQLHRV VGRSATQDLV AELGKLTRLR
0701: VVRITFSEQL EESSQEALVQ SLSNLRLLQE LVLFSEMPER GSDMWGDWEL PRQLRRLIIE GIVFSRQPRW INRSCLPRLY SLYLMVHAVE AQDLDNLARL
0801: PELQYLMLFG FSWPPRYTVG PDDFRNLRFC EVGTTFEFRK GAMPRLEVLR FGVCVPFEQF PTKDVIEDLD FDLDNVILLQ QVRVKVNCAG ATVTQVEEVE
0901: AVVMRAVENH ANRPTIKMDR VYEQNILSDE EREALVRLFS LNMFVYFNSQ LQRHIEKDCC VRTMKDKSDA FFISQLRRYR HLQKAIIFID CSGASMCEVQ
1001: KVEAAYRHAA EVHPNHPSIE LIRTNTDGMA SSSSDHPNTE PRN
001: MAEAVVSFGV EKLWELLSRE SARLNGIDEQ VDGLKRQLGR LQSLLKDADA KKNETERVRN FLEDVKDIVY DADDIIESFL LNELRGKEKG IKKQVRTLAC
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH
Arabidopsis Description
RPP8L2Probable disease resistance RPP8-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P0C8S1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.