Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0286850-00 | Rice | cytosol | 26.98 | 71.25 |
| KXG28972 | Sorghum | cytosol | 55.97 | 63.92 |
| OQU83875 | Sorghum | vacuole | 52.31 | 63.51 |
| Zm00001d007457_P003 | Maize | cytosol | 36.51 | 40.06 |
| Zm00001d036280_P002 | Maize | cytosol | 36.42 | 39.75 |
| Zm00001d007456_P005 | Maize | cytosol | 26.49 | 37.93 |
| Zm00001d004771_P001 | Maize | cytosol | 37.19 | 37.51 |
| Zm00001d007851_P002 | Maize | cytosol | 35.07 | 37.3 |
| Zm00001d004772_P006 | Maize | cytosol | 36.8 | 37.12 |
| Zm00001d024924_P001 | Maize | cytosol | 34.97 | 36.93 |
| Zm00001d049770_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 32.18 | 35.12 |
| Zm00001d004526_P001 | Maize | endoplasmic reticulum | 33.04 | 34.54 |
| Zm00001d023303_P004 | Maize | cytosol, endoplasmic reticulum | 33.43 | 34.15 |
| Zm00001d023267_P002 | Maize | cytosol | 34.1 | 33.94 |
| Zm00001d023304_P002 | Maize | cytosol | 34.1 | 33.91 |
| Zm00001d023265_P010 | Maize | cytosol, vacuole | 33.62 | 33.59 |
| Zm00001d024973_P003 | Maize | cytosol | 32.66 | 32.22 |
| Zm00001d037650_P002 | Maize | extracellular, plasma membrane | 34.1 | 21.31 |
Protein Annotations
| EntrezGene:103643343 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A1D6KQC7 | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| InterPro:NB-ARC | ProteinID:ONM04960.1 | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43889 |
| PANTHER:PTHR43889:SF26 | InterPro:RX-like_CC | SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI000844236C | EnsemblPlantsGene:Zm00001d032376 |
| EnsemblPlants:Zm00001d032376_P012 | EnsemblPlants:Zm00001d032376_T012 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1:-:224515562..224521743
Molecular Weight (calculated)
118073.0 Da
IEP (calculated)
5.622
GRAVY (calculated)
-0.104
Length
1038 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEVMTGALPS LIPKLANLVA GEYNLQKGVK GDIMFLQEEL ESMRDALEEI SKVPADQLPN RDKIWARNVR ELSYDIEVSI DAFMVQSKGR KLVKQYGLQK
0101: VIGMCLDWLL QPKIRHKMAT EIRTIKRRIV EVHERHIRYE INLGPDKLGN AAVDPRIFGQ YTELKELVGI DETRDELIDI MMEGNVVPMK QGKIISIVGF
0201: GGLGKTTLAN AVYEKIRALF DCCAFVSVSQ TPDLKKLFKS LLYDLGKYIN EESLDERQLI NVLREFLQER RYLIVIDDIW DISVWKMIRC ALPDNDIGYI
0301: IVTTTRISDV AEKVGGAYKL KPLSLNNSRE LMYKIIFGNE NRENTKDKEI CLDEELAEVS NKILKKCAGV PLAIITMASV LACKARNEME WYEVYNSIGV
0401: GIENNLDVGN MRKILSFSYY DMASHLKTCL LYLSMFPEDY KIEKDRLIWM WIAEGFVQYV KQGKSLFEHG ESYFNELINR GMIQPIYNQA GMIYECRVHD
0501: MVLGLICSLS NGENFVTTLN GLGHGSPSNM IRRLSVQNGN ESQAMTLQTR NLQQVRSVVA FPDATASVVT VLRSFRVLRV LDLQDCDLSQ CCSLKYLGNL
0601: FHLRYLGLCN TSITQLPEEI VNLQLLQILD VWNNKMYCLP STIVQLRYLM CLYIDGFTRV PNGIGSLTSL EELTFLGIYD STVDIIEELG QLTELRVLHI
0701: VLFGEWNDKL VECLHKLKKL KYLYIKDRSG QLNIGGLDAW VAPPNLQILN TRSGCWFTTL SASAWMNPSL LQDLSLSTTV RELQQDDIII LGSLPALRYL
0801: NLMIVGEDLG VHNEIHGECI VGAGLFPSLV YCQLWGNVAP IVFQRGAMPR LRTLDFRLSV QEVRGINGRD GGIDLGLRNL PSLQKVWVHL DPEGANKAEV
0901: KELEAELTRA IKIHPNHPQL YGIQDEDADS ECDVHPNHPT LKEHGVMVMK MMSTENQCGG FVVDLELNFL DFSVILFYRD NEPTCDHPLE NGRAIWWPDG
1001: LANLERMTFT ELKRSVAMWQ PGETCNWRSG GLERTKRQ
0101: VIGMCLDWLL QPKIRHKMAT EIRTIKRRIV EVHERHIRYE INLGPDKLGN AAVDPRIFGQ YTELKELVGI DETRDELIDI MMEGNVVPMK QGKIISIVGF
0201: GGLGKTTLAN AVYEKIRALF DCCAFVSVSQ TPDLKKLFKS LLYDLGKYIN EESLDERQLI NVLREFLQER RYLIVIDDIW DISVWKMIRC ALPDNDIGYI
0301: IVTTTRISDV AEKVGGAYKL KPLSLNNSRE LMYKIIFGNE NRENTKDKEI CLDEELAEVS NKILKKCAGV PLAIITMASV LACKARNEME WYEVYNSIGV
0401: GIENNLDVGN MRKILSFSYY DMASHLKTCL LYLSMFPEDY KIEKDRLIWM WIAEGFVQYV KQGKSLFEHG ESYFNELINR GMIQPIYNQA GMIYECRVHD
0501: MVLGLICSLS NGENFVTTLN GLGHGSPSNM IRRLSVQNGN ESQAMTLQTR NLQQVRSVVA FPDATASVVT VLRSFRVLRV LDLQDCDLSQ CCSLKYLGNL
0601: FHLRYLGLCN TSITQLPEEI VNLQLLQILD VWNNKMYCLP STIVQLRYLM CLYIDGFTRV PNGIGSLTSL EELTFLGIYD STVDIIEELG QLTELRVLHI
0701: VLFGEWNDKL VECLHKLKKL KYLYIKDRSG QLNIGGLDAW VAPPNLQILN TRSGCWFTTL SASAWMNPSL LQDLSLSTTV RELQQDDIII LGSLPALRYL
0801: NLMIVGEDLG VHNEIHGECI VGAGLFPSLV YCQLWGNVAP IVFQRGAMPR LRTLDFRLSV QEVRGINGRD GGIDLGLRNL PSLQKVWVHL DPEGANKAEV
0901: KELEAELTRA IKIHPNHPQL YGIQDEDADS ECDVHPNHPT LKEHGVMVMK MMSTENQCGG FVVDLELNFL DFSVILFYRD NEPTCDHPLE NGRAIWWPDG
1001: LANLERMTFT ELKRSVAMWQ PGETCNWRSG GLERTKRQ
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.