Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d004771_P001 | Maize | cytosol | 98.15 | 98.15 |
| TraesCSU01G086000.1 | Wheat | cytosol | 26.34 | 65.14 |
| TraesCS2B01G180600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 29.93 | 62.86 |
| TraesCS5B01G032500.1 | Wheat | cytosol | 18.95 | 62.5 |
| TraesCS6A01G009500.1 | Wheat | cytosol | 26.24 | 58.7 |
| TraesCSU01G232900.1 | Wheat | nucleus | 16.13 | 57.64 |
| TraesCS6A01G009600.1 | Wheat | nucleus | 15.65 | 57.3 |
| TraesCS6D01G012900.1 | Wheat | cytosol, endoplasmic reticulum, golgi, mitochondrion | 48.88 | 56.01 |
| TraesCS6A01G009900.1 | Wheat | cytosol | 52.19 | 53.33 |
| TraesCS7B01G416600.3 | Wheat | cytosol | 49.56 | 53.01 |
| TraesCS6A01G010100.1 | Wheat | cytosol | 47.91 | 52.9 |
| Os11t0588600-01 | Rice | cytosol, plasma membrane | 13.99 | 52.75 |
| TraesCS6D01G012700.1 | Wheat | plasma membrane | 50.92 | 51.93 |
| TraesCS6B01G016600.1 | Wheat | cytosol | 40.33 | 50.86 |
| HORVU6Hr1G002150.4 | Barley | cytosol, golgi, nucleus | 55.59 | 49.87 |
| TraesCS6D01G013000.1 | Wheat | cytosol | 48.98 | 49.85 |
| TraesCS6A01G009700.1 | Wheat | cytosol | 49.95 | 49.47 |
| TraesCS6D01G012600.2 | Wheat | cytosol | 49.17 | 49.46 |
| TraesCS6D01G013100.1 | Wheat | endoplasmic reticulum | 50.15 | 49.38 |
| TraesCS6A01G010400.1 | Wheat | cytosol | 48.59 | 48.83 |
| Os11t0590700-01 | Rice | cytosol | 40.14 | 48.36 |
| TraesCSU01G098900.1 | Wheat | cytosol | 45.0 | 47.58 |
| TraesCS6B01G016100.1 | Wheat | cytosol | 49.17 | 47.29 |
| TraesCS6B01G016500.1 | Wheat | cytosol | 49.08 | 47.15 |
| Os11t0588400-01 | Rice | cytosol | 39.65 | 44.79 |
| TraesCS5B01G032600.1 | Wheat | cytosol | 26.92 | 44.32 |
| Os11t0590900-00 | Rice | cytosol | 16.23 | 39.67 |
| Os07t0294100-00 | Rice | cytosol | 26.82 | 39.04 |
| Zm00001d007851_P002 | Maize | cytosol | 36.93 | 38.93 |
| Zm00001d024924_P001 | Maize | cytosol | 36.05 | 37.74 |
| Zm00001d032376_P012 | Maize | cytosol | 37.12 | 36.8 |
| Zm00001d023267_P002 | Maize | cytosol | 36.64 | 36.15 |
| Zm00001d004526_P001 | Maize | endoplasmic reticulum | 34.79 | 36.05 |
| Zm00001d023265_P010 | Maize | cytosol, vacuole | 36.35 | 36.0 |
| Zm00001d023304_P002 | Maize | cytosol | 36.05 | 35.54 |
| Zm00001d007457_P003 | Maize | cytosol | 32.36 | 35.2 |
| Zm00001d036280_P002 | Maize | cytosol | 32.36 | 35.02 |
| Zm00001d023303_P004 | Maize | cytosol, endoplasmic reticulum | 34.11 | 34.55 |
| Zm00001d024973_P003 | Maize | cytosol | 33.33 | 32.6 |
| Zm00001d049770_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 29.74 | 32.18 |
| Zm00001d007456_P005 | Maize | cytosol | 21.48 | 30.48 |
| Zm00001d037650_P002 | Maize | extracellular, plasma membrane | 31.39 | 19.45 |
Protein Annotations
| Gene3D:1.20.1160.11 | EntrezGene:100383650 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A1D6EHE9 |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043531 | InterPro:IPR003822 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| InterPro:NB-ARC | ProteinID:ONM19552.1 | ProteinID:ONM19554.1 | ProteinID:ONM19555.1 | InterPro:P-loop_NTPase | InterPro:PAH |
| InterPro:PAH_sf | PFAM:PF00931 | PFAM:PF02671 | PRINTS:PR00364 | PFscan:PS51477 | PANTHER:PTHR43889 |
| PANTHER:PTHR43889:SF23 | InterPro:RX-like_CC | SUPFAM:SSF47762 | SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI0002218884 |
| EnsemblPlantsGene:Zm00001d004772 | EnsemblPlants:Zm00001d004772_P006 | EnsemblPlants:Zm00001d004772_T006 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2:-:138162888..138168957
Molecular Weight (calculated)
116680.0 Da
IEP (calculated)
7.225
GRAVY (calculated)
-0.135
Length
1029 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEFATGAMGT LLPKLGMLLQ EELHLKNNVK EGIKSLTAEL ESMQAALVKV SDVPLDQLDP NVKIWANEVR GLSYDIEDRL DSFKVRMEGL DSTKRKTIMG
0101: FIQQTRGLVT KFKIRHVIFD DIKDFGSQVK EVKERYDRYK VHDVVANPIA TTVDPRLLAM YNKVSDLVGI DEEAKELMNN LFEDGDEPAK KIKTVSVVGF
0201: GGLGKTTLVK AVYDKVKKEF DCSAFVSIGQ KCDLKKVFKD VLYDLDKQNH ENIIASEMDE KQLIDKLQEF LADKRYLVVI DDIWDISTWK LIRCALVESN
0301: PGSRIIITTR ICEVAKKVGG VYNKKPLSLD DSKTLFYTRV FAGESMSLDN ISGEVCNKIL RKCGGVPLSI ITIASLLVGK QREDWSKVYD YIGFGHEDNE
0401: VIGNMRKILA FSYYNLPPYL KTCLLHLSIF PEDHKIEKNS LIWRWIAEGF VIGREELGLF EVGESYFNEL INRSMIRWIE LSSRSKIRDG CGIHDMVLDL
0501: IRTLSGEVNL VTVSDVEQQC TTSSSYSPVR SISARRLAFH KKRSIEHNPG TEIGQVRSFN AFNCSGSRMP RLLSFRVLRV LALENCNFSA GNCCLGNIGK
0601: LHQLRYLGLV ETSIRDDLLP GETGHLKFLQ TLDVRRSGIK ILPASVGELM KLMCLRATEG TRMMAEIGKL ASLEELEVHS VDKSPNFATG LGQLTKVRVL
0701: EIHFDEMDES TEKALMESLR NLRKIQSLQI WSKKERTIDL GGLLEDWTPT PSDLRQLMLC GIHLPRRPSW IDPSCVPLLS YLSLTVQAVQ VQDLEILGRL
0801: PLLSYLYIWS EGINCLSYTA TSRDEFQNLR HLDTNLEIMC GQQGALPMVE KLTCRASMGK YVAFARSSMP FDDGSVVNPA TVAEAELPVI LPLDIGWPVN
0901: MPCLRGITYL LDYQDCSAKE WAHVETLLLH VRKIHPNCPP FRIKKNCRDK KITLIDAFSY LEAVKDVFKG NPSKYSEFFD LMIDYKRDRI KIKDVIIRLK
1001: TLFTGHDPNL ILDFSVFLPR EWAITLGDL
0101: FIQQTRGLVT KFKIRHVIFD DIKDFGSQVK EVKERYDRYK VHDVVANPIA TTVDPRLLAM YNKVSDLVGI DEEAKELMNN LFEDGDEPAK KIKTVSVVGF
0201: GGLGKTTLVK AVYDKVKKEF DCSAFVSIGQ KCDLKKVFKD VLYDLDKQNH ENIIASEMDE KQLIDKLQEF LADKRYLVVI DDIWDISTWK LIRCALVESN
0301: PGSRIIITTR ICEVAKKVGG VYNKKPLSLD DSKTLFYTRV FAGESMSLDN ISGEVCNKIL RKCGGVPLSI ITIASLLVGK QREDWSKVYD YIGFGHEDNE
0401: VIGNMRKILA FSYYNLPPYL KTCLLHLSIF PEDHKIEKNS LIWRWIAEGF VIGREELGLF EVGESYFNEL INRSMIRWIE LSSRSKIRDG CGIHDMVLDL
0501: IRTLSGEVNL VTVSDVEQQC TTSSSYSPVR SISARRLAFH KKRSIEHNPG TEIGQVRSFN AFNCSGSRMP RLLSFRVLRV LALENCNFSA GNCCLGNIGK
0601: LHQLRYLGLV ETSIRDDLLP GETGHLKFLQ TLDVRRSGIK ILPASVGELM KLMCLRATEG TRMMAEIGKL ASLEELEVHS VDKSPNFATG LGQLTKVRVL
0701: EIHFDEMDES TEKALMESLR NLRKIQSLQI WSKKERTIDL GGLLEDWTPT PSDLRQLMLC GIHLPRRPSW IDPSCVPLLS YLSLTVQAVQ VQDLEILGRL
0801: PLLSYLYIWS EGINCLSYTA TSRDEFQNLR HLDTNLEIMC GQQGALPMVE KLTCRASMGK YVAFARSSMP FDDGSVVNPA TVAEAELPVI LPLDIGWPVN
0901: MPCLRGITYL LDYQDCSAKE WAHVETLLLH VRKIHPNCPP FRIKKNCRDK KITLIDAFSY LEAVKDVFKG NPSKYSEFFD LMIDYKRDRI KIKDVIIRLK
1001: TLFTGHDPNL ILDFSVFLPR EWAITLGDL
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.