Factsheet for TraesCS6D01G013000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G012600.2	Wheat	cytosol	90.11	89.05
TraesCS6A01G010100.1	Wheat	cytosol	80.02	86.8
TraesCS6A01G009500.1	Wheat	cytosol	39.27	86.3
TraesCS6A01G010400.1	Wheat	cytosol	84.08	83.01
TraesCS6A01G009700.1	Wheat	cytosol	83.68	81.42
TraesCS6A01G009600.1	Wheat	nucleus	22.26	80.07
TraesCSU01G232900.1	Wheat	nucleus	22.75	79.86
TraesCS6D01G012900.1	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	68.84	77.51
TraesCS6D01G013100.1	Wheat	endoplasmic reticulum	75.57	73.11
TraesCS2B01G180600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	31.36	64.69
Os11t0588600-01	Rice	cytosol, plasma membrane	14.44	53.48
TraesCS7D01G006300.1	Wheat	cytosol	28.39	51.16
TraesCS1D01G396500.1	Wheat	cytosol	13.95	50.36
TraesCS2D01G028200.2	Wheat	cytosol	14.84	49.34
TraesCS3D01G021900.1	Wheat	cytosol	24.63	49.02
Zm00001d004772_P006	Maize	cytosol	49.85	48.98
Zm00001d004771_P001	Maize	cytosol	49.75	48.88
TraesCS6D01G012700.1	Wheat	plasma membrane	46.69	46.78
TraesCS7D01G005200.1	Wheat	cytosol	14.84	45.87
TraesCS3D01G460000.1	Wheat	cytosol	26.61	45.75
TraesCS3D01G472900.1	Wheat	cytosol, extracellular	11.47	45.31
Os11t0588400-01	Rice	cytosol	40.36	44.79
Os11t0590700-01	Rice	cytosol	36.99	43.79
TraesCS3D01G473800.2	Wheat	cytosol, endoplasmic reticulum	27.2	43.72
TraesCS3D01G472700.1	Wheat	cytosol, endoplasmic reticulum	27.2	43.72
TraesCS2D01G590900.1	Wheat	cytosol	25.91	43.67
TraesCS3D01G082100.1	Wheat	cytosol	39.17	42.95
TraesCS3D01G541600.1	Wheat	cytosol, extracellular	11.77	42.65
TraesCS7D01G429600.1	Wheat	cytosol	33.04	42.17
TraesCS7D01G099900.1	Wheat	cytosol	16.12	42.12
TraesCS1D01G005900.1	Wheat	cytosol	16.12	41.48
TraesCS6D01G005300.1	Wheat	cytosol, extracellular, plastid	39.96	40.52
TraesCS7D01G106200.2	Wheat	cytosol	11.18	39.93
TraesCS7D01G542300.1	Wheat	cytosol	22.26	39.82
TraesCS7D01G099800.1	Wheat	cytosol	19.49	39.8
TraesCS3D01G474200.1	Wheat	cytosol	19.78	39.53
TraesCS3D01G474300.1	Wheat	extracellular, plasma membrane	35.91	39.5
TraesCS2D01G574300.1	Wheat	cytosol	22.65	39.41
TraesCS7D01G429500.1	Wheat	cytosol	30.17	39.2
TraesCS7D01G008200.1	Wheat	cytosol	24.53	38.87
TraesCS1D01G006000.1	Wheat	cytosol	28.98	38.86
TraesCS2D01G028300.1	Wheat	cytosol	36.3	38.84
TraesCS7D01G006800.1	Wheat	cytosol	25.42	38.65
TraesCS1D01G029200.3	Wheat	cytosol	36.4	38.61
TraesCS3D01G474100.1	Wheat	cytosol, extracellular	6.43	38.24
TraesCS2D01G591300.1	Wheat	cytosol	27.79	38.02
TraesCS3D01G473700.1	Wheat	plasma membrane	34.22	37.94
TraesCS3D01G474000.2	Wheat	extracellular, plasma membrane	36.8	37.61
TraesCS1D01G006800.1	Wheat	cytosol	35.61	37.27
TraesCS3D01G541500.1	Wheat	cytosol	5.34	37.24
TraesCS2D01G574500.1	Wheat	cytosol	12.66	37.21
TraesCS1D01G028200.1	Wheat	cytosol	35.21	37.16
TraesCS1D01G028600.1	Wheat	plasma membrane	35.21	37.04
TraesCS1D01G267200.1	Wheat	cytosol	31.55	36.79
TraesCS7D01G106100.2	Wheat	cytosol	33.63	36.72
TraesCS2D01G591200.1	Wheat	cytosol	19.78	36.56
Os07t0294100-00	Rice	cytosol	25.52	36.49
TraesCS5D01G344600.1	Wheat	cytosol	34.82	36.44
TraesCS1D01G032200.2	Wheat	cytosol	34.42	36.25
Os11t0590900-00	Rice	cytosol	15.03	36.1
TraesCS1D01G006300.1	Wheat	cytosol	22.45	36.03
TraesCS2D01G503500.1	Wheat	cytosol	19.49	36.01
TraesCS4D01G315100.1	Wheat	plasma membrane	32.15	35.99
TraesCS1D01G029100.2	Wheat	cytosol	35.61	35.93
TraesCS6D01G100300.1	Wheat	cytosol	32.64	35.37
TraesCS7D01G538200.2	Wheat	cytosol	34.03	35.35
TraesCS2D01G003200.1	Wheat	cytosol	34.82	35.27
TraesCS2D01G590700.1	Wheat	cytosol	28.88	35.14
TraesCS2D01G590800.2	Wheat	extracellular	29.87	34.79
TraesCS2D01G069600.2	Wheat	extracellular	37.29	34.56
TraesCS1D01G005300.1	Wheat	cytosol	30.46	34.41
TraesCS7D01G106300.1	Wheat	cytosol	20.47	34.21
TraesCS5D01G366600.1	Wheat	cytosol, nucleus, plastid, vacuole	33.53	33.66
TraesCS2D01G575000.1	Wheat	cytosol	26.61	33.5
TraesCS2D01G574400.1	Wheat	cytosol	31.85	33.37
TraesCS7D01G105600.1	Wheat	cytosol	18.89	32.82
TraesCS5D01G021700.1	Wheat	cytosol	34.62	32.53
TraesCS2D01G028400.1	Wheat	plastid	30.27	32.14
TraesCS1D01G028700.1	Wheat	cytosol	17.11	31.17
KXG22895	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	35.71	31.12
TraesCS2D01G057600.1	Wheat	cytosol	33.04	30.87
TraesCS2D01G601200.1	Wheat	cytosol	31.06	28.99
TraesCS2D01G574700.1	Wheat	cytosol, extracellular, golgi, mitochondrion	27.2	24.42
TraesCS2D01G503400.1	Wheat	cytosol	9.0	15.72

Protein Annotations

EnsemblPlants:TraesCS6D01G013000.1	EnsemblPlantsGene:TraesCS6D01G013000	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF23	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52047	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr6D:-:5176989..5183572

Molecular Weight (calculated)

113401.0 Da

IEP (calculated)

5.522

GRAVY (calculated)

-0.169

Length

1011 amino acids

Sequence
(BLAST)

0001: MEFATGAMSS LLPKLGELLM EEYKLKESVK NGIGELKAEL ESMQTALVKV SSVPLDQLDP QVKIWANEVR ELSYAVEDSL DSFVTRVEGV EPTKPKIKHL
0101: LKAAHNEFTK FKARHEIASD VKDIESQVRK IKERYDRYKI DDVVANLATT PVDPRLPALY KKLSDLVGID EPINELIKIL SEGIHMPDKN PKIVSIVGFG
0201: GLGKTTLAKA LYDKLSKTYQ CQAFVPVGQN PNTQKVLRDI LLELDTGLSR ATETMVEWQL INQLQKILAG KRYFIVIDDI WDTQTWDVIK CAFMDSHPES
0301: RLIITTRIVD VATKAGGIYH MQPLSDDYSK MLFYTRTSGS EGPAEVTTKI LKKCGGVPLA ITTIASLLVG KHSEDWSKVY DAIGFGHADN GDVHNTRKIL
0401: SFSYYDLSSN LKTCLLYLSV FPEDYLIDKI SLIWRWVAEG FIPYREGMES FELGEIYFNT LVNKSMIRWI DPEDNDGRGG CRVHDMVLDL IRTISNEVNF
0501: VTVHDMEHHD TRPGGKSANK VHRLAVHGKS GEHNYNIAME HVRSFNVVEC SANSMPLLLS FKVLRVLVIE DCVFSEGSSL EHLGKLLQLR YLGLVKIAVK
0601: IPEGIGHDLK FLEILDVRGG LISELPPSVG ELMNLRCLWA DKGTVMKGEI GKLTCLEELQ LYSVEKCPNF FTEVRKLTKL RVLKIYFAEI QESAGKALME
0701: SLCNLHNIHS LTVLDDGRQA EYSVVVNHSL EDLAPCTKLY ELNLLCIVIP RVPSWINHLS VPLLSRLGLH VDAVEVRDVQ TIGRLPSLLV LFLWSKDEKN
0801: ISYTFGSNEF HKLRILWTKK IEIAVGEGAL PMLESLLYSA SAERKDAASL VPWRRNSCPL LKDVTCWLDC TNNSYREVKE AKQALRQASG TRPNAVYLDL
0901: DIEEENYDEE AGRFIDNLVE VLGGLERPGK EGIPADEADL RDMITSLESL LRDGVEPRVG RYAEQELRGF VTTFKSLLPD AAAATTIKEE PDNGDATSSA
1001: DQDQEGAASH C

Best Arabidopsis Sequence Match ( AT1G58410.1 )
(BLAST)

001: MELVSFGVEK LWDRLSQEYD QFKGVEDQVT ELKSNLNLLK SFLKDADAKK HISEMVRHCV EEIKDIVYDT EDIIETFILK EKVEMKRGIM KRIKRFASTI
101: MDRRELASDI GGISKRISKV IQDMQSFGVQ QIITDGSRSS HPLQERQREM RHTFSRDSEN DFVGMEANVK KLVGYLVEKD DYQIVSLTGM GGLGKTTLAR
201: QVFNHDVVKD RFDGFAWVSV SQEFTRISVW QTILQNLTSK ERKDEIQNMK EADLHDDLFR LLESSKTLIV LDDIWKEEDW DLIKPIFPPK KGWKVLLTSR
301: TESIAMRGDT TYISFKPKCL SIPDSWTLFQ SIAMPRKDTS EFKVDEEMEN MGKKMIKHCG GLSLAVKVLG GLLAAKYTLH DWKRLSENIG SHIVERTSGN
401: NSSIDHVLSV SFEELPNYLK HCFLYLAHFP EDHEIDVEKL HYYWAAEGIS ERRRYDGETI RDTGDSYIEE LVRRNMVISE RDVMTSRFET CRLHDMMREI
501: CLFKAKEENF LQIVSNHSPT SNPQTLGASR RFVLHNPTTL HVERYKNNPK LRSLVVVYDD IGNRRWMLSG SIFTRVKLLR VLDLVQAKFK GGKLPSDIGK
601: LIHLRYLSLK DAKVSHLPSS LRNLVLLIYL DIRTDFTDIF VPNVFMGMRE LRYLELPRFM HEKTKLELSN LEKLEALENF STKSSSLEDL RGMVRLRTLV
701: IILSEGTSLQ TLSASVCGLR HLENFKIMEN AGVNRMGEER MVLDFTYLKK LTLSIEMPRL PKIQHLPSHL TVLDLSYCCL EEDPMPILEK LLELKDLSLD
801: YLSFSGRKMV CSAGGFPQLR KLALDEQEEW EEWIVEEGSM SRLHTLSIWS STLKELPDGL RFIYSLKNLI MGKSWMERLS ERGEEFYKVQ NIPFIKFSS

Arabidopsis Description

RXW24LProbable disease resistance protein RXW24L [Source:UniProtKB/Swiss-Prot;Acc:Q9C646]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.