Factsheet for TraesCS3D01G474000.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	nucleus, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G473800.2	Wheat	cytosol, endoplasmic reticulum	55.81	87.76
TraesCS3D01G472700.1	Wheat	cytosol, endoplasmic reticulum	55.81	87.76
TraesCS3D01G474300.1	Wheat	extracellular, plasma membrane	78.87	84.87
TraesCS3A01G479400.2	Wheat	extracellular, plasma membrane	77.65	83.3
TraesCS3A01G479100.1	Wheat	extracellular, plasma membrane	77.35	83.15
TraesCS3B01G522600.1	Wheat	cytosol, extracellular, plasma membrane	75.43	81.26
HORVU3Hr1G104770.2	Barley	cytosol, plasma membrane, plastid	73.61	79.22
TraesCS3B01G522800.1	Wheat	cytosol	69.57	78.27
HORVU3Hr1G105020.36	Barley	plasma membrane	39.53	77.12
TraesCS3B01G522700.1	Wheat	cytosol	70.58	74.65
TraesCS3D01G472900.1	Wheat	cytosol, extracellular	19.01	73.44
TraesCS3D01G474100.1	Wheat	cytosol, extracellular	12.34	71.76
TraesCS3D01G473700.1	Wheat	plasma membrane	66.13	71.71
TraesCS3D01G541600.1	Wheat	cytosol, extracellular	19.11	67.74
TraesCS3D01G541500.1	Wheat	cytosol	9.91	67.59
TraesCS3D01G474200.1	Wheat	cytosol	33.97	66.4
TraesCS7D01G099900.1	Wheat	cytosol	22.04	56.33
TraesCS7D01G106200.2	Wheat	cytosol	15.67	54.77
TraesCS7D01G542300.1	Wheat	cytosol	31.24	54.69
TraesCS1D01G006000.1	Wheat	cytosol	41.56	54.51
TraesCS7D01G099800.1	Wheat	cytosol	26.79	53.54
Os10t0124400-00	Rice	cytosol	15.07	52.84
TraesCS7D01G106100.2	Wheat	cytosol	49.14	52.48
TraesCS1D01G006300.1	Wheat	cytosol	32.76	51.43
Os01t0603100-01	Rice	extracellular	28.21	50.82
TraesCS1D01G032200.2	Wheat	cytosol	49.24	50.73
TraesCS7D01G106300.1	Wheat	cytosol	29.52	48.26
TraesCS2D01G574300.1	Wheat	cytosol	28.01	47.68
TraesCS3D01G021900.1	Wheat	cytosol	24.17	47.05
TraesCS7D01G105600.1	Wheat	cytosol	27.3	46.39
TraesCS1D01G267200.1	Wheat	cytosol	40.65	46.37
TraesCS7D01G006300.1	Wheat	cytosol	25.99	45.81
TraesCS3D01G460000.1	Wheat	cytosol	27.0	45.41
TraesCS1D01G396500.1	Wheat	cytosol	12.74	45.0
TraesCS2D01G574400.1	Wheat	cytosol	43.48	44.56
TraesCS2D01G574500.1	Wheat	cytosol	15.27	43.9
TraesCS1D01G029200.3	Wheat	cytosol	41.96	43.55
TraesCS5D01G344600.1	Wheat	cytosol	42.47	43.48
TraesCS2D01G028300.1	Wheat	cytosol	41.46	43.39
TraesCS2D01G003200.1	Wheat	cytosol	43.17	42.79
TraesCS1D01G028600.1	Wheat	plasma membrane	41.46	42.66
TraesCS1D01G028200.1	Wheat	cytosol	41.25	42.59
TraesCS2D01G028200.2	Wheat	cytosol	12.94	42.11
TraesCS5D01G366600.1	Wheat	cytosol, nucleus, plastid, vacuole	42.77	42.01
TraesCS2D01G590900.1	Wheat	cytosol	25.38	41.83
TraesCS6D01G100300.1	Wheat	cytosol	39.43	41.8
TraesCS2D01G575000.1	Wheat	cytosol	33.77	41.59
TraesCS6D01G012900.1	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	37.21	40.98
TraesCS1D01G029100.2	Wheat	cytosol	41.25	40.72
TraesCS3D01G082100.1	Wheat	cytosol	37.92	40.67
TraesCS7D01G429600.1	Wheat	cytosol	32.15	40.15
TraesCS6D01G005300.1	Wheat	cytosol, extracellular, plastid	39.53	39.22
TraesCS1D01G006800.1	Wheat	cytosol	38.12	39.03
TraesCS1D01G005900.1	Wheat	cytosol	15.47	38.93
TraesCS7D01G005200.1	Wheat	cytosol	12.84	38.84
TraesCS2D01G591300.1	Wheat	cytosol	28.72	38.43
TraesCS1D01G028700.1	Wheat	cytosol	21.44	38.2
TraesCS4D01G315100.1	Wheat	plasma membrane	34.48	37.76
TraesCS6D01G012700.1	Wheat	plasma membrane	38.32	37.56
TraesCS2D01G028400.1	Wheat	plastid	36.1	37.5
TraesCS2D01G590700.1	Wheat	cytosol	31.04	36.94
TraesCS1D01G005300.1	Wheat	cytosol	33.37	36.87
TraesCS6D01G013000.1	Wheat	cytosol	37.61	36.8
TraesCS7D01G429500.1	Wheat	cytosol	28.82	36.63
TraesCS2D01G591200.1	Wheat	cytosol	20.12	36.38
TraesCS6D01G013100.1	Wheat	endoplasmic reticulum	38.22	36.17
TraesCS6D01G012600.2	Wheat	cytosol	37.41	36.17
TraesCS7D01G006800.1	Wheat	cytosol	24.27	36.09
TraesCS2D01G590800.2	Wheat	extracellular	31.55	35.94
TraesCS7D01G538200.2	Wheat	cytosol	35.19	35.77
TraesCS5D01G021700.1	Wheat	cytosol	38.83	35.69
TraesCS7D01G008200.1	Wheat	cytosol	22.75	35.27
TraesCS2D01G057600.1	Wheat	cytosol	37.31	34.1
TraesCS2D01G069600.2	Wheat	extracellular	37.11	33.64
TraesCS2D01G503500.1	Wheat	cytosol	18.6	33.64
TraesCS2D01G601200.1	Wheat	cytosol	35.39	32.32
TraesCS2D01G574700.1	Wheat	cytosol, extracellular, golgi, mitochondrion	35.29	30.99
TraesCS2D01G503400.1	Wheat	cytosol	7.28	12.44

Protein Annotations

EnsemblPlants:TraesCS3D01G474000.2	EnsemblPlantsGene:TraesCS3D01G474000	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF25	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr3D:+:575525961..575530351

Molecular Weight (calculated)

111840.0 Da

IEP (calculated)

6.695

GRAVY (calculated)

-0.176

Length

989 amino acids

Sequence
(BLAST)

001: MEIAMGAIGP LLPKLGELLI GEITLEKQVR KGIESLITEL KLMQDVLNKV SKEPADQLDE GVKIWAGNVK ELSYQMEDIV DAFMMRVGDG GESTNPKNRV
101: KKILKKVKRL FKNGKDLHRI SDALEEVVLQ AKQLAELRQR YEQEMRDTSA NTSVDPRMMA LYTDVTELVG IKETRDKLIK MLTEGDDWSK HPLKTISIVG
201: FGGLGKTTLA KAAYDEIKAK FDRVAFVSVS QNPKMKKVLK DILYGLDKVK YENIHNAARD EKYLIDDIIE YLNDKRYLIV IDDIWDKEVW KSIKCAFSKK
301: SPGSRLITTT RNVSVSEACC SSEGDIYRME PLSDDVSRTL FYKRVFSHEE GCPQELVQVS KDILKKCGGI PLAIISIASL LANNHQIKKK DQWYTLLNSI
401: GRGLTEDQSL EEMKKILLFS YYDLPSYLKP CLLYLSIFPE DHKIMRDRLI WRWISEGLVY SDKEETSLYE LGNSYFNELV NRSMIQPIGI NVEGNVEGCR
501: VHDMVLDLIC SLSSEENFVT ILDDTRRKIP NSEIKVRRLS IQNTKIDVDT TRMEHMRSLT IFTSDVVGKV LDISSFQVLR VLDLEGCKNV SDVGYVGNLL
601: HLRYLGLKDT HVKDLPMEIG KLQFLLTLDL RGTKIEVLPS SVVQLRRLMC LYVDYDMKLP SGIGNLASLE VLDDLGLSDV DLDFVKELGH LTKLRVLRLD
701: CYSFDESLGK ALKESISNIY KLDSLDVYVD DGLINCLSED WVPPPQLCRL AFQSDVSWFK TLPPWINSSL LPLLSYLHIT AFKVRPEDIQ LLGMLPSLRV
801: LWVMDYSQSR RGEDVVEMPM LSSGALFPCA TECNFTSIGA VPSMFPHGAA PRLQHLGFAY PTKWISGTSL PSSESRFVLS TPAKRKRSVL SWRKLSLGMR
901: HLPSLQRVEV DVINEGAISS NQEVDEAMVA LNAATQDHPN RPALKIEFVD RGVRCSSRGG RSEACDAIEF QAARVLRSIH PILHPGSMS

Best Arabidopsis Sequence Match ( AT1G58410.1 )
(BLAST)

001: MELVSFGVEK LWDRLSQEYD QFKGVEDQVT ELKSNLNLLK SFLKDADAKK HISEMVRHCV EEIKDIVYDT EDIIETFILK EKVEMKRGIM KRIKRFASTI
101: MDRRELASDI GGISKRISKV IQDMQSFGVQ QIITDGSRSS HPLQERQREM RHTFSRDSEN DFVGMEANVK KLVGYLVEKD DYQIVSLTGM GGLGKTTLAR
201: QVFNHDVVKD RFDGFAWVSV SQEFTRISVW QTILQNLTSK ERKDEIQNMK EADLHDDLFR LLESSKTLIV LDDIWKEEDW DLIKPIFPPK KGWKVLLTSR
301: TESIAMRGDT TYISFKPKCL SIPDSWTLFQ SIAMPRKDTS EFKVDEEMEN MGKKMIKHCG GLSLAVKVLG GLLAAKYTLH DWKRLSENIG SHIVERTSGN
401: NSSIDHVLSV SFEELPNYLK HCFLYLAHFP EDHEIDVEKL HYYWAAEGIS ERRRYDGETI RDTGDSYIEE LVRRNMVISE RDVMTSRFET CRLHDMMREI
501: CLFKAKEENF LQIVSNHSPT SNPQTLGASR RFVLHNPTTL HVERYKNNPK LRSLVVVYDD IGNRRWMLSG SIFTRVKLLR VLDLVQAKFK GGKLPSDIGK
601: LIHLRYLSLK DAKVSHLPSS LRNLVLLIYL DIRTDFTDIF VPNVFMGMRE LRYLELPRFM HEKTKLELSN LEKLEALENF STKSSSLEDL RGMVRLRTLV
701: IILSEGTSLQ TLSASVCGLR HLENFKIMEN AGVNRMGEER MVLDFTYLKK LTLSIEMPRL PKIQHLPSHL TVLDLSYCCL EEDPMPILEK LLELKDLSLD
801: YLSFSGRKMV CSAGGFPQLR KLALDEQEEW EEWIVEEGSM SRLHTLSIWS STLKELPDGL RFIYSLKNLI MGKSWMERLS ERGEEFYKVQ NIPFIKFSS

Arabidopsis Description

RXW24LProbable disease resistance protein RXW24L [Source:UniProtKB/Swiss-Prot;Acc:Q9C646]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.