Factsheet for TraesCS2D01G028300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G039600.1	Wheat	cytosol	84.76	85.03
HORVU2Hr1G004150.3	Barley	cytosol	48.99	82.53
TraesCS2A01G026400.1	Wheat	cytosol	78.2	77.46
TraesCS2D01G028200.2	Wheat	cytosol	21.8	67.76
TraesCS1D01G267200.1	Wheat	cytosol	60.95	66.44
TraesCS2D01G003200.1	Wheat	cytosol	64.87	61.42
TraesCS1D01G029200.3	Wheat	cytosol	55.13	54.67
TraesCS5D01G344600.1	Wheat	cytosol	55.77	54.55
TraesCS1D01G396500.1	Wheat	cytosol	16.08	54.29
TraesCS1D01G028200.1	Wheat	cytosol	54.6	53.86
TraesCS1D01G028600.1	Wheat	plasma membrane	53.65	52.76
TraesCS2D01G028400.1	Wheat	plastid	52.59	52.21
TraesCS5D01G366600.1	Wheat	cytosol, nucleus, plastid, vacuole	55.56	52.14
TraesCS3D01G021900.1	Wheat	cytosol	27.72	51.57
TraesCS3D01G472700.1	Wheat	cytosol, endoplasmic reticulum	34.07	51.19
TraesCS3D01G473800.2	Wheat	cytosol, endoplasmic reticulum	34.07	51.19
TraesCS3D01G460000.1	Wheat	cytosol	31.75	51.02
TraesCS7D01G006300.1	Wheat	cytosol	30.26	50.98
TraesCS1D01G029100.2	Wheat	cytosol	53.65	50.6
TraesCS1D01G028700.1	Wheat	cytosol	29.63	50.45
TraesCS7D01G099800.1	Wheat	cytosol	26.35	50.3
TraesCS3D01G541500.1	Wheat	cytosol	7.62	49.66
TraesCS7D01G542300.1	Wheat	cytosol	29.63	49.56
TraesCS3D01G474200.1	Wheat	cytosol	26.03	48.62
TraesCS7D01G099900.1	Wheat	cytosol	19.79	48.32
TraesCS3D01G472900.1	Wheat	cytosol, extracellular	13.02	48.05
TraesCS1D01G006000.1	Wheat	cytosol	38.31	48.01
TraesCS2D01G574300.1	Wheat	cytosol	29.31	47.68
TraesCS7D01G005200.1	Wheat	cytosol	16.4	47.4
TraesCS3D01G474100.1	Wheat	cytosol, extracellular	8.47	47.06
TraesCS3D01G541600.1	Wheat	cytosol, extracellular	13.54	45.88
TraesCS2D01G590900.1	Wheat	cytosol	28.36	44.67
TraesCS7D01G106100.2	Wheat	cytosol	43.6	44.49
TraesCS3D01G474300.1	Wheat	extracellular, plasma membrane	42.86	44.07
TraesCS2D01G574500.1	Wheat	cytosol	15.87	43.6
TraesCS7D01G429600.1	Wheat	cytosol	36.4	43.43
TraesCS3D01G473700.1	Wheat	plasma membrane	41.69	43.2
TraesCS3D01G082100.1	Wheat	cytosol	41.59	42.62
TraesCS1D01G032200.2	Wheat	cytosol	43.17	42.5
TraesCS7D01G106200.2	Wheat	cytosol	12.7	42.4
TraesCS1D01G006300.1	Wheat	cytosol	27.72	41.59
TraesCS3D01G474000.2	Wheat	extracellular, plasma membrane	43.39	41.46
TraesCS6D01G005300.1	Wheat	cytosol, extracellular, plastid	43.7	41.42
TraesCS1D01G006800.1	Wheat	cytosol	42.22	41.3
TraesCS7D01G106300.1	Wheat	cytosol	26.35	41.16
TraesCS7D01G105600.1	Wheat	cytosol	25.08	40.72
TraesCS1D01G005900.1	Wheat	cytosol	16.93	40.71
TraesCS2D01G575000.1	Wheat	cytosol	34.18	40.22
TraesCS6D01G100300.1	Wheat	cytosol	39.47	39.98
TraesCS6D01G012900.1	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	37.88	39.87
TraesCS2D01G591300.1	Wheat	cytosol	31.11	39.78
TraesCS4D01G315100.1	Wheat	plasma membrane	37.46	39.2
TraesCS2D01G591200.1	Wheat	cytosol	22.54	38.94
TraesCS7D01G429500.1	Wheat	cytosol	31.96	38.82
TraesCS2D01G574400.1	Wheat	cytosol	39.58	38.76
Os11t0657900-00	Rice	cytosol	41.9	38.45
TraesCS7D01G006800.1	Wheat	cytosol	26.45	37.59
TraesCS2D01G590700.1	Wheat	cytosol	32.91	37.42
TraesCS2D01G069600.2	Wheat	extracellular	43.17	37.4
TraesCS2D01G590800.2	Wheat	extracellular	34.29	37.33
TraesCS1D01G005300.1	Wheat	cytosol	35.24	37.21
TraesCS6D01G012700.1	Wheat	plasma membrane	38.94	36.47
TraesCS6D01G013000.1	Wheat	cytosol	38.84	36.3
TraesCS7D01G008200.1	Wheat	cytosol	24.44	36.21
TraesCS6D01G012600.2	Wheat	cytosol	39.05	36.07
TraesCS7D01G538200.2	Wheat	cytosol	36.93	35.87
TraesCS6D01G013100.1	Wheat	endoplasmic reticulum	38.84	35.12
TraesCS5D01G021700.1	Wheat	cytosol	39.58	34.76
TraesCS2D01G503500.1	Wheat	cytosol	19.89	34.37
TraesCS2D01G057600.1	Wheat	cytosol	38.94	34.01
TraesCS2D01G601200.1	Wheat	cytosol	36.3	31.67
TraesCS2D01G574700.1	Wheat	cytosol, extracellular, golgi, mitochondrion	34.81	29.22
TraesCS2D01G503400.1	Wheat	cytosol	7.3	11.92

Protein Annotations

EnsemblPlants:TraesCS2D01G028300.1	EnsemblPlantsGene:TraesCS2D01G028300	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	PANTHER:PTHR43889	PANTHER:PTHR43889:SF25	PFAM:PF00931	PRINTS:PR00364	SEG:seg
SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr2D:-:11575923..11581087

Molecular Weight (calculated)

106146.0 Da

IEP (calculated)

5.576

GRAVY (calculated)

-0.158

Length

945 amino acids

Sequence
(BLAST)

001: MDLATGAMGT LLPKLLELLS EEYKLQKGVR EGVKSLEKEM RSMYAALRKV AEVPREQLDE QVKLWAGEVR ELSFDMEDVV DKFLVHVDEG SEPAANSNKL
101: KRLTKKMASL FTKGKVRHEI ADAIKDINKQ VQAVAERRAR YNVDITVANL PTVTSIDPRL GAMYTEATGL VGIAGTRDQE VMKLLSEGDD MSKKNLKIVS
201: VVGFGGLGKT TLVKMVYEKI GGDYDCKAFV PVGRKAEAKT VFTNILLNLG INGSELIMLN EQLLIDKLRE FLKNKRYLIV IDDIWDEKLW TIIKCAFSSS
301: NKFGSRLITT TRIVSVSESC SSSTNDSIYT MEPLSDDDSK RLFYKRIFSL ESGCPPDFEE VSRDILKKCG GVPLAIITIS SLLASGQRVK PKKEWHVLLD
401: SIGRGLTENH TAKEMIRILS FSYYDLPSPM KTCLLYLSMF PEDSEIMKDQ LIWMWIAETF VQSGKANTSL FEVGETYFNE LVNRSLIQPV YDDYGFVHAC
501: HVHDSILDLI CSLSSEENFV TIVNGTSDNM SSQGNVRRLS LQNGIKEEDR TMPHIAESIG QVRSVVTFEP AIDLMPPFSS FVVLRVLDLD EYDGTKEDHL
601: NLQELGRLLH LRYLRLPRHG ITELPEEIGK LKFLQVLILP GYTRLPSTVI KLTRLMCLRS NGGRPELPDG IGKLRSMEVL NKIKVGSVSI VQELGSMHRL
701: RELNIQFESS EPVEAFVESV EKMQKIQRVE ISAKCEREVS MDLLGELWVP PASLWEFVMR KGVRLSMLPA WDPYHLSQLS KLVISVGDVR QEDLELLGRL
801: PALRILVLVS NNQRPLVVGA EGFRCLEQVG LFSKSPSQIL FQPGALPKAE RVLLHIGLRA AKEEAAGSGG DWFDMAIGNL PSLRKVHVWF YRSGVTVGEA
901: KQAKAALENA LLAHPNRPSI DIDFDEYIPE DARDEDVYTE DEDSD

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.