Factsheet for TraesCS2D01G003200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G028200.2	Wheat	cytosol	20.54	67.43
TraesCS1D01G267200.1	Wheat	cytosol	58.12	66.9
TraesCS2D01G028300.1	Wheat	cytosol	61.42	64.87
TraesCS7A01G064000.1	Wheat	cytosol	60.12	64.31
TraesCS2B01G038100.2	Wheat	cytosol	60.32	63.44
TraesCS5D01G344600.1	Wheat	cytosol	53.91	55.69
TraesCS2D01G028400.1	Wheat	plastid	52.71	55.25
TraesCS1D01G029200.3	Wheat	cytosol	52.71	55.19
TraesCS1D01G028200.1	Wheat	cytosol	52.51	54.7
TraesCS5D01G366600.1	Wheat	cytosol, nucleus, plastid, vacuole	54.11	53.62
TraesCS1D01G028600.1	Wheat	plasma membrane	51.6	53.59
TraesCS1D01G396500.1	Wheat	cytosol	14.83	52.86
TraesCS3D01G473800.2	Wheat	cytosol, endoplasmic reticulum	33.07	52.46
TraesCS3D01G472700.1	Wheat	cytosol, endoplasmic reticulum	33.07	52.46
TraesCS1D01G029100.2	Wheat	cytosol	51.8	51.6
TraesCS3D01G460000.1	Wheat	cytosol	29.76	50.51
TraesCS7D01G006300.1	Wheat	cytosol	28.26	50.27
TraesCS3D01G021900.1	Wheat	cytosol	25.55	50.2
TraesCS1D01G028700.1	Wheat	cytosol	27.76	49.91
TraesCS1D01G006000.1	Wheat	cytosol	37.47	49.6
TraesCS7D01G542300.1	Wheat	cytosol	27.96	49.38
TraesCS2D01G574300.1	Wheat	cytosol	28.46	48.88
TraesCS3D01G474200.1	Wheat	cytosol	24.65	48.62
TraesCS7D01G099800.1	Wheat	cytosol	23.65	47.68
TraesCS7D01G005200.1	Wheat	cytosol	15.53	47.4
TraesCS7D01G099900.1	Wheat	cytosol	18.34	47.29
TraesCS3D01G474300.1	Wheat	extracellular, plasma membrane	42.99	46.68
TraesCS3D01G472900.1	Wheat	cytosol, extracellular	11.52	44.92
TraesCS3D01G541600.1	Wheat	cytosol, extracellular	12.53	44.8
TraesCS3D01G473700.1	Wheat	plasma membrane	40.38	44.19
TraesCS7D01G106200.2	Wheat	cytosol	12.53	44.17
TraesCS7D01G106100.2	Wheat	cytosol	40.88	44.06
TraesCS3D01G474100.1	Wheat	cytosol, extracellular	7.41	43.53
TraesCS3D01G474000.2	Wheat	extracellular, plasma membrane	42.79	43.17
TraesCS1D01G032200.2	Wheat	cytosol	41.48	43.12
TraesCS2D01G574500.1	Wheat	cytosol	14.83	43.02
TraesCS1D01G006300.1	Wheat	cytosol	26.65	42.22
TraesCS2D01G590900.1	Wheat	cytosol	25.35	42.17
TraesCS3D01G541500.1	Wheat	cytosol	6.11	42.07
TraesCS1D01G006800.1	Wheat	cytosol	40.38	41.72
TraesCS6D01G100300.1	Wheat	cytosol	38.68	41.37
TraesCS7D01G429600.1	Wheat	cytosol	32.67	41.16
TraesCS3D01G082100.1	Wheat	cytosol	37.98	41.11
TraesCS7D01G106300.1	Wheat	cytosol	24.85	40.99
TraesCS7D01G105600.1	Wheat	cytosol	23.75	40.72
TraesCS2D01G574400.1	Wheat	cytosol	39.28	40.62
TraesCS6D01G005300.1	Wheat	cytosol, extracellular, plastid	40.48	40.52
TraesCS2D01G575000.1	Wheat	cytosol	32.57	40.47
Os11t0657900-00	Rice	cytosol	40.88	39.61
TraesCS6D01G012900.1	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	34.97	38.86
TraesCS4D01G315100.1	Wheat	plasma membrane	34.57	38.21
TraesCS2D01G591300.1	Wheat	cytosol	28.16	38.02
TraesCS1D01G005900.1	Wheat	cytosol	14.83	37.66
TraesCS7D01G006800.1	Wheat	cytosol	24.85	37.29
TraesCS7D01G429500.1	Wheat	cytosol	29.06	37.28
TraesCS1D01G005300.1	Wheat	cytosol	33.27	37.09
TraesCS2D01G069600.2	Wheat	extracellular	40.38	36.94
TraesCS7D01G538200.2	Wheat	cytosol	35.97	36.9
TraesCS2D01G590700.1	Wheat	cytosol	30.16	36.22
TraesCS2D01G591200.1	Wheat	cytosol	19.84	36.2
TraesCS6D01G012700.1	Wheat	plasma membrane	36.27	35.88
TraesCS7D01G008200.1	Wheat	cytosol	22.85	35.74
TraesCS5D01G021700.1	Wheat	cytosol	38.28	35.5
TraesCS2D01G590800.2	Wheat	extracellular	30.86	35.48
TraesCS6D01G013000.1	Wheat	cytosol	35.27	34.82
TraesCS6D01G012600.2	Wheat	cytosol	35.07	34.21
TraesCS2D01G503500.1	Wheat	cytosol	18.74	34.19
TraesCS6D01G013100.1	Wheat	endoplasmic reticulum	35.77	34.16
TraesCS2D01G057600.1	Wheat	cytosol	35.67	32.9
TraesCS2D01G601200.1	Wheat	cytosol	34.37	31.67
TraesCS2D01G574700.1	Wheat	cytosol, extracellular, golgi, mitochondrion	33.47	29.66
TraesCS2D01G503400.1	Wheat	cytosol	7.31	12.61

Protein Annotations

EnsemblPlants:TraesCS2D01G003200.1	EnsemblPlantsGene:TraesCS2D01G003200	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF25	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52047	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr2D:+:2257674..2262194

Molecular Weight (calculated)

113430.0 Da

IEP (calculated)

8.195

GRAVY (calculated)

-0.171

Length

998 amino acids

Sequence
(BLAST)

001: MNLATGAMDS LLPKLLELLK GEYKLKKDVK EGVKSLETEM QRMHTVLREV AEVPRDQLDE QFKLWAGEVR ELSFNIEDVV DKFLLRVDDG SETAGNSNML
101: KRLTEKMVGL FTKGMVGLFT KVMARHEIAG AIKEINKQVQ EVANRRARYT TDGIVAKSAA ATSIDPRLRA LYTEVTELIG IVGKRDQELM KLLSEGDNVS
201: KKKLKIISVV GIGGLGKTTL VKTVYDKIKG DFKYKAFVPV GQNATVKKVS RDILLDIGMY PSQLTMLDER QLINKLRQIL ENKRYLIVID DIWDENLWEY
301: IKLAFSDSNV GSRLITTTRK VSMSKLCCPS TNDSIYQMEP LSFDDSKRLF YKRVFSDESG CPREFEKVSI DILKKCGGVP LAIITMASLL AIDQRVKPED
401: EWNVLLQSIG RGLTEVPSVE EMRRILSFSY YDLPSHLKTC LLYLSMFPEH HEIRRDRLIW MWICESFIQC EKANTSLFET GEKYFNELVN RNLIQPVYGD
501: EGMVYACRVH VMVLDLISSL SSKENFVTIL NGTGDGMSSK SNVRRLSIQN ASKEEHHSKK RKRREEHHSK KGKRKEEHQT TPLKSVSMLQ VRSIALFEPA
601: IGLMLPFSRF VVLRVLDLTG CDLRDQNHLN IRELGGLFHL RYLGLGQTGI SELPEELGKL KFLLVLDLSG DFIKELSTVI KLRRLMCLLV YFKYKRLPDG
701: LGNLTSMEVL RTIRGNSISI VKELGNMERL RELGILFDDL SLEMEEAFVE SLGKMSNIQS LYITVRDDDY VPMDVLGGSW VAPQRLREFL IARSAKFSTL
801: PTWIKRGPSH LLQLSILRIF VRDVRQEDLE ILARLPALRC LSLRMEDPEI QRQLVVGDDG FRCLTSFELF TEFLGHIVFQ PGALPKAKQV RFSIGLRAAK
901: EPAAGNGGDC FDLGLGNLRS LREVLVAAIR WGEDTEQVED ALEDALMHAI WAHPNCPSHQ LITVPDMKRL MISLPAAIPN YGRMSERWSM AGDLLSDE

Best Arabidopsis Sequence Match ( AT3G46530.1 )
(BLAST)

001: MVDAITEFVV GKIGNYLIEE ASMFMAVKED LEELKTELTC IHGYLKDVEA REREDEVSKE WSKLVLDFAY DVEDVLDTYH LKLEERSQRR GLRRLTNKIG
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC

Arabidopsis Description

RPP13Disease resistance protein RPP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M667]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.