Factsheet for TraesCS6D01G100300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G028220.1	Barley	cytosol, extracellular	47.91	53.53
TraesCS2D01G574300.1	Wheat	cytosol	33.01	53.01
KXG24016	Sorghum	cytosol	50.7	49.74
TraesCS3D01G474200.1	Wheat	cytosol	24.97	46.05
TraesCS3D01G460000.1	Wheat	cytosol	28.62	45.41
TraesCS7D01G542300.1	Wheat	cytosol	27.44	45.31
TraesCS3D01G021900.1	Wheat	cytosol	24.65	45.28
TraesCS3D01G473800.2	Wheat	cytosol, endoplasmic reticulum	30.33	44.99
TraesCS3D01G472700.1	Wheat	cytosol, endoplasmic reticulum	30.33	44.99
TraesCS2D01G574400.1	Wheat	cytosol	46.52	44.97
TraesCS7D01G106300.1	Wheat	cytosol	29.05	44.79
TraesCS7D01G006300.1	Wheat	cytosol	26.9	44.74
TraesCS1D01G006000.1	Wheat	cytosol	36.01	44.56
TraesCS2D01G575000.1	Wheat	cytosol	37.51	43.59
TraesCS7D01G105600.1	Wheat	cytosol	27.01	43.3
TraesCS7D01G106100.2	Wheat	cytosol	42.66	42.98
TraesCS7D01G099800.1	Wheat	cytosol	22.4	42.22
TraesCS2D01G574500.1	Wheat	cytosol	15.54	42.15
TraesCS1D01G396500.1	Wheat	cytosol	12.65	42.14
TraesCS3D01G474300.1	Wheat	extracellular, plasma membrane	41.37	42.0
TraesCS1D01G032200.2	Wheat	cytosol	43.09	41.88
TraesCS7D01G099900.1	Wheat	cytosol	17.15	41.34
TraesCS3D01G473700.1	Wheat	plasma membrane	39.34	40.24
TraesCS1D01G267200.1	Wheat	cytosol	37.19	40.02
TraesCS5D01G344600.1	Wheat	cytosol	41.05	39.65
TraesCS1D01G006300.1	Wheat	cytosol	26.69	39.52
TraesCS2D01G028300.1	Wheat	cytosol	39.98	39.47
TraesCS3D01G474000.2	Wheat	extracellular, plasma membrane	41.8	39.43
TraesCS1D01G029200.3	Wheat	cytosol	40.19	39.35
TraesCS1D01G028200.1	Wheat	cytosol	39.87	38.83
TraesCS2D01G003200.1	Wheat	cytosol	41.37	38.68
TraesCS1D01G028600.1	Wheat	plasma membrane	39.76	38.61
TraesCS2D01G590900.1	Wheat	cytosol	24.65	38.33
TraesCS6D01G012900.1	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	36.44	37.86
TraesCS2D01G028200.2	Wheat	cytosol	12.33	37.83
TraesCS3D01G082100.1	Wheat	cytosol	37.3	37.74
TraesCS5D01G366600.1	Wheat	cytosol, nucleus, plastid, vacuole	40.3	37.34
TraesCS7D01G005200.1	Wheat	cytosol	13.08	37.31
TraesCS7D01G429600.1	Wheat	cytosol	31.3	36.87
TraesCS1D01G006800.1	Wheat	cytosol	38.05	36.75
TraesCS1D01G029100.2	Wheat	cytosol	39.44	36.73
TraesCS6D01G005300.1	Wheat	cytosol, extracellular, plastid	38.37	35.91
TraesCS2D01G591300.1	Wheat	cytosol	28.19	35.59
TraesCS4D01G315100.1	Wheat	plasma membrane	34.41	35.55
TraesCS7D01G106200.2	Wheat	cytosol	10.72	35.34
TraesCS1D01G028700.1	Wheat	cytosol	20.9	35.14
TraesCS3D01G541600.1	Wheat	cytosol, extracellular	10.5	35.13
TraesCS7D01G006800.1	Wheat	cytosol	24.97	35.04
TraesCS6D01G012700.1	Wheat	plasma membrane	37.83	34.99
TraesCS1D01G005900.1	Wheat	cytosol	14.68	34.86
TraesCS3D01G472900.1	Wheat	cytosol, extracellular	9.54	34.77
TraesCS1D01G005300.1	Wheat	cytosol	32.9	34.3
TraesCS7D01G429500.1	Wheat	cytosol	28.08	33.68
TraesCS2D01G590700.1	Wheat	cytosol	29.69	33.33
TraesCS7D01G008200.1	Wheat	cytosol	22.72	33.23
TraesCS7D01G538200.2	Wheat	cytosol	34.62	33.2
TraesCS6D01G013000.1	Wheat	cytosol	35.37	32.64
TraesCS2D01G590800.2	Wheat	extracellular	30.23	32.49
TraesCS5D01G021700.1	Wheat	cytosol	37.41	32.43
TraesCS2D01G503500.1	Wheat	cytosol	18.97	32.36
TraesCS6D01G013100.1	Wheat	endoplasmic reticulum	36.12	32.25
TraesCS2D01G028400.1	Wheat	plastid	32.9	32.25
TraesCS6D01G012600.2	Wheat	cytosol	34.94	31.87
TraesCS2D01G057600.1	Wheat	cytosol	36.87	31.79
TraesCS2D01G591200.1	Wheat	cytosol	18.54	31.63
TraesCS2D01G574700.1	Wheat	cytosol, extracellular, golgi, mitochondrion	37.83	31.35
TraesCS3D01G474100.1	Wheat	cytosol, extracellular	5.68	31.18
TraesCS2D01G069600.2	Wheat	extracellular	35.48	30.34
TraesCS2D01G601200.1	Wheat	cytosol	35.16	30.29
TraesCS3D01G541500.1	Wheat	cytosol	4.5	28.97
TraesCS2D01G503400.1	Wheat	cytosol	6.75	10.88

Protein Annotations

EnsemblPlants:TraesCS6D01G100300.1	EnsemblPlantsGene:TraesCS6D01G100300	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	PANTHER:PTHR43889	PANTHER:PTHR43889:SF25	PFAM:PF00931	PRINTS:PR00364	SEG:seg
SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr6D:-:63334346..63338541

Molecular Weight (calculated)

105673.0 Da

IEP (calculated)

7.008

GRAVY (calculated)

-0.136

Length

933 amino acids

Sequence
(BLAST)

001: MNLAVAAVSS IIPMLGRLLT KEYNLQKSAK EDVKYLQREL MSMHAALRAI AEVPPDQLPW QDMLWAGDIT ELSHDIKDLL ESFDACVAGS VPPPDAGYFQ
101: VLKVKMANLF KMAKVRREIA TAVKGVKEHV QEVANRDDRY RCRGGGAAPR TTTTIDPLLL VLYGNQKTVG MDAARDKIMA KLVHGATGLQ ILSIVGFGGL
201: GKTTLAKAVY DMAAKIKYDC RVFVSVSRNP DIRKIFRKLL FQFDVETYIR FNQTELDETQ LISLLRQSIG AKRYLIVVDD IWDTNAWGLI SLAFMDNNTR
301: SRIITTTRNF DVSRACCSFD NELIHTMEPL SEGDSKKLFY ERIFASETGC PPELEQVSTE ILKKCAGVPL AIIALAGHLT SNQQIKPEGQ WHDLLNSIGR
401: GLTNGGSVEH MKKILSFSYY DLPSHLKTCL LYLSIFPEDY YIDKTRLVKR WIAEGFIQGE DLFELGESYF NELVNRSMIQ PINIDTDGRA KGCRVHDMML
501: DLICDLSSEN NFISILDTIK GDWSFKRNMR RLSLQKRMTE LTSTQLSTTS MSQVRSFTVF SPAINQMLSL SLFKVLRVLD LEDCNLGNDR GLNLHCVGNL
601: LQLRYLGLRD TKLREIPTEI GNLRLLQILD LHGVDAEKLP TGVVGLSYLM FLHLRENTDL PVGYRNLTFL QELTKANFSD DMEGLRFLTE LRVLSFSWPS
701: GCGPDKIDIL VNSLRNLEKL QSLEITSESI DLMESSWMPY PAQQLRRLVL HGWFHNLPGF ISSSWHPRLS YLWIEVRKLQ PWDIHDLGTL PALRYLYLKS
801: ILDTAMEERA TQSSPLNIDG FPCATECWFE GVTVNPLGFR PGTMPMVRCL AFGAQVWNIL DIRHSIKHLG PDGLELDYLS WSIMHLSSLE QLSVDLHGEE
901: ASSARYTRAE AALKHATYNH PNRPKVNIWS PRG

Best Arabidopsis Sequence Match ( AT1G58602.1 )
(BLAST)

0001: MAGELVSFAV NKLWDLLSHE YTLFQGVEDQ VAELKSDLNL LKSFLKDADA KKHTSALVRY CVEEIKDIVY DAEDVLETFV QKEKLGTTSG IRKHIKRLTC
0101: IVPDRREIAL YIGHVSKRIT RVIRDMQSFG VQQMIVDDYM HPLRNREREI RRTFPKDNES GFVALEENVK KLVGYFVEED NYQVVSITGM GGLGKTTLAR
0201: QVFNHDMVTK KFDKLAWVSV SQDFTLKNVW QNILGDLKPK EEETKEEEKK ILEMTEYTLQ RELYQLLEMS KSLIVLDDIW KKEDWEVIKP IFPPTKGWKL
0301: LLTSRNESIV APTNTKYFNF KPECLKTDDS WKLFQRIAFP INDASEFEID EEMEKLGEKM IEHCGGLPLA IKVLGGMLAE KYTSHDWRRL SENIGSHLVG
0401: GRTNFNDDNN NSCNYVLSLS FEELPSYLKH CFLYLAHFPE DYEIKVENLS YYWAAEEIFQ PRHYDGEIIR DVGDVYIEEL VRRNMVISER DVKTSRFETC
0501: HLHDMMREVC LLKAKEENFL QITSNPPSTA NFQSTVTSRR LVYQYPTTLH VEKDINNPKL RSLVVVTLGS WNMAGSSFTR LELLRVLDLV QAKLKGGKLA
0601: SCIGKLIHLR YLSLEYAEVT HIPYSLGNLK LLIYLNLHIS LSSRSNFVPN VLMGMQELRY LALPSLIERK TKLELSNLVK LETLENFSTK NSSLEDLRGM
0701: VRLRTLTIEL IEETSLETLA ASIGGLKYLE KLEIDDLGSK MRTKEAGIVF DFVHLKRLRL ELYMPRLSKE QHFPSHLTTL YLQHCRLEED PMPILEKLLQ
0801: LKELELGHKS FSGKKMVCSS CGFPQLQKLS ISGLKEWEDW KVEESSMPLL LTLNIFDCRK LKQLPDEHLP SHLTAISLKK CGLEDPIPTL ERLVHLKELS
0901: LSELCGRIMV CTGGGFPQLH KLDLSELDGL EEWIVEDGSM PRLHTLEIRR CLKLKKLPNG FPQLQNLHLT EVEEWEEGMI VKQGSMPLLH TLYIWHCPKL
1001: PGEQHFPSHL TTVFLLGMYV EEDPMRILEK LLHLKNVSLF QSFSGKRMVC SGGGFPQLQK LSIREIEWEE WIVEQGSMPL LHTLYIGVCP NLKELPDGLR
1101: FIYSLKNLIV SKRWKKRLSE GGEDYYKVQH IPSVEFDD

Arabidopsis Description

Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q0WV58]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.