Factsheet for TraesCS4D01G315100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
cytosol 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G318600.1	Wheat	cytosol	74.64	91.33
TraesCS5A01G493600.1	Wheat	plasma membrane	93.13	91.31
TraesCS2D01G590900.1	Wheat	cytosol	40.31	60.67
TraesCS1D01G005900.1	Wheat	cytosol	25.58	58.78
TraesCS2D01G591200.1	Wheat	cytosol	34.33	56.67
TraesCS2D01G591300.1	Wheat	cytosol	45.4	55.48
TraesCS2D01G590800.2	Wheat	extracellular	52.16	54.26
TraesCS2D01G590700.1	Wheat	cytosol	49.17	53.43
TraesCS1D01G005300.1	Wheat	cytosol	52.16	52.63
TraesCS7D01G538200.2	Wheat	cytosol	54.93	50.98
Os11t0550500-01	Rice	cytosol	51.16	50.55
Zm00001d036280_P002	Maize	cytosol	52.82	50.16
Zm00001d007457_P003	Maize	cytosol	52.49	50.11
OQU83506	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	47.73	48.76
TraesCS3D01G021900.1	Wheat	cytosol	26.8	47.64
Zm00001d007456_P005	Maize	cytosol	37.1	46.21
TraesCS7D01G006300.1	Wheat	cytosol	27.91	44.92
TraesCS3D01G460000.1	Wheat	cytosol	28.79	44.22
TraesCS1D01G396500.1	Wheat	cytosol	13.51	43.57
TraesCS3D01G473800.2	Wheat	cytosol, endoplasmic reticulum	29.24	41.97
TraesCS3D01G472700.1	Wheat	cytosol, endoplasmic reticulum	29.24	41.97
TraesCS3D01G472900.1	Wheat	cytosol, extracellular	11.52	40.62
TraesCS7D01G099900.1	Wheat	cytosol	17.28	40.31
TraesCS7D01G542300.1	Wheat	cytosol	25.14	40.18
TraesCS2D01G028200.2	Wheat	cytosol	13.51	40.13
TraesCS3D01G474200.1	Wheat	cytosol	22.48	40.12
TraesCS2D01G574300.1	Wheat	cytosol	25.36	39.41
TraesCS7D01G099800.1	Wheat	cytosol	21.59	39.39
TraesCS5D01G344600.1	Wheat	cytosol	41.2	38.51
TraesCS1D01G267200.1	Wheat	cytosol	36.88	38.41
TraesCS1D01G006000.1	Wheat	cytosol	32.0	38.33
TraesCS5D01G021700.1	Wheat	cytosol	45.51	38.2
TraesCS1D01G029200.3	Wheat	cytosol	39.98	37.88
TraesCS3D01G541600.1	Wheat	cytosol, extracellular	11.63	37.63
TraesCS2D01G028300.1	Wheat	cytosol	39.2	37.46
TraesCS1D01G028600.1	Wheat	plasma membrane	39.65	37.25
TraesCS7D01G106100.2	Wheat	cytosol	37.98	37.04
TraesCS1D01G029100.2	Wheat	cytosol	41.09	37.03
TraesCS6D01G012900.1	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	36.77	36.97
TraesCS1D01G028200.1	Wheat	cytosol	39.2	36.95
TraesCS7D01G106300.1	Wheat	cytosol	24.7	36.86
TraesCS5D01G366600.1	Wheat	cytosol, nucleus, plastid, vacuole	40.97	36.74
TraesCS7D01G429600.1	Wheat	cytosol	32.23	36.74
TraesCS3D01G474300.1	Wheat	extracellular, plasma membrane	37.1	36.45
TraesCS1D01G006800.1	Wheat	cytosol	38.98	36.44
TraesCS1D01G032200.2	Wheat	cytosol	38.54	36.25
TraesCS7D01G005200.1	Wheat	cytosol	12.96	35.78
TraesCS1D01G006300.1	Wheat	cytosol	24.92	35.71
TraesCS3D01G473700.1	Wheat	plasma membrane	35.88	35.53
TraesCS2D01G574500.1	Wheat	cytosol	13.4	35.17
TraesCS2D01G057600.1	Wheat	cytosol	42.08	35.12
TraesCS6D01G012700.1	Wheat	plasma membrane	39.09	34.99
TraesCS7D01G106200.2	Wheat	cytosol	10.96	34.98
TraesCS3D01G082100.1	Wheat	cytosol	35.66	34.92
TraesCS6D01G005300.1	Wheat	cytosol, extracellular, plastid	38.43	34.8
TraesCS2D01G003200.1	Wheat	cytosol	38.21	34.57
TraesCS3D01G474000.2	Wheat	extracellular, plasma membrane	37.76	34.48
TraesCS6D01G100300.1	Wheat	cytosol	35.55	34.41
TraesCS7D01G105600.1	Wheat	cytosol	22.15	34.36
TraesCS7D01G006800.1	Wheat	cytosol	25.14	34.14
TraesCS1D01G028700.1	Wheat	cytosol	20.16	32.79
TraesCS7D01G429500.1	Wheat	cytosol	28.13	32.65
TraesCS2D01G574400.1	Wheat	cytosol	34.88	32.64
TraesCS2D01G503500.1	Wheat	cytosol	19.71	32.54
TraesCS2D01G601200.1	Wheat	cytosol	38.87	32.41
TraesCS6D01G013100.1	Wheat	endoplasmic reticulum	37.21	32.15
TraesCS6D01G013000.1	Wheat	cytosol	35.99	32.15
TraesCS7D01G008200.1	Wheat	cytosol	22.7	32.13
TraesCS6D01G012600.2	Wheat	cytosol	36.32	32.06
TraesCS2D01G575000.1	Wheat	cytosol	28.24	31.76
TraesCS2D01G028400.1	Wheat	plastid	32.78	31.09
TraesCS2D01G069600.2	Wheat	extracellular	36.66	30.34
TraesCS3D01G474100.1	Wheat	cytosol, extracellular	5.54	29.41
TraesCS3D01G541500.1	Wheat	cytosol	4.54	28.28
TraesCS2D01G574700.1	Wheat	cytosol, extracellular, golgi, mitochondrion	29.57	23.71
TraesCS2D01G503400.1	Wheat	cytosol	5.87	9.15

Protein Annotations

EnsemblPlants:TraesCS4D01G315100.1	EnsemblPlantsGene:TraesCS4D01G315100	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF34	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr4D:+:480971081..480975117

Molecular Weight (calculated)

103484.0 Da

IEP (calculated)

7.056

GRAVY (calculated)

-0.164

Length

903 amino acids

Sequence
(BLAST)

001: MAQLVMTATL LPKLASLLSP EYSLHRAARG EIMFLKVEME SMQAALVKVS QAPIDQPPDV QVKLWAKEVR ALSHDLEDSV DKFMVRIRTD GLDKSHTFMG
101: FIDRSLNLLT KAKIRHKILT DVRDIKSRVK EVSKRRETYK VDIVPARPTA TTTDSLRQLA LYKKATELIG TEEKSNELVE MLRKGDDASV KQLKMVSVVG
201: FGGLGKTTLA NAAYQKLKGD FDCGAFVSVS FTPNIEKIFK NLLHQLDKNW YHNINESNWG EAELITEITE YLRNKRYIIV IDDIWDKSVW KNIRCALIEN
301: ECGSRVIITT RILDVAKEDG DVYEMKPLSI TNSKILFYQR IFGKEDECPH KQLIEVSEKI LMKCGGVPLA IITISSLLAE RHDSAHWSKV YQSMGTGLEN
401: NPDVNGMRRI LYVSYYDLPA HLKICLLYLS LYPEDCIFKR KYLVWKWVGE GFIQPKQGES LYEVGEQYFD ELINKSLIQT VNSEWCWHFD FSKKKASHCR
501: VHDMVLDLIT CLSHEEDFMT TLGGHEYESL PVKIRRLSLH TSKQEDAKVL STMDMSHVRS LTVFKKSFSL LPPLSSFPLL SALDLTNCKQ VDDRHSMLIC
601: SMFHLRYLWL YGTYITEIPR EIANLQLLQV LDIGETEIEE LPSTFEQLHQ LVYLRVNSWI RVPYGSENLK SLQELKSVIV MSPSVLLDLS GLTELRCLEM
701: KVIEWNKSFE EPFRRCLSSL INLQSLKVNG CRITEDPECG NLLLPGPQQL RRFIAPYCMA SSVPRWMSSL SCLSYIVISL YTLGEEDLHV LGCLPSLRHL
801: NMDVRRHTPR QRQAWPVIGA TGYPFRCLTE LRYVQHAEVV FALGAMQKLQ VLELHLGTRD TMHQSGYFNL GLENLSSLQQ VSIDLDSSKD RVEEVETAEA
901: VLR

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.