CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi, nucleus

Predictor Summary:

nucleus 2
peroxisome 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome, secretory
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G068380.3	Barley	cytosol	53.62	51.58
TraesCS5B01G237200.1	Wheat	cytosol	53.05	51.31
TraesCS1D01G005900.1	Wheat	cytosol	22.29	50.13
Os11t0550500-01	Rice	cytosol	51.47	49.78
TraesCS7A01G551900.1	Wheat	cytosol	47.74	49.53
TraesCS4B01G318600.1	Wheat	cytosol	41.29	49.46
TraesCS2D01G591200.1	Wheat	cytosol	30.54	49.36
TraesCS2D01G590900.1	Wheat	cytosol	33.26	49.0
TraesCS1A01G009900.2	Wheat	cytosol	45.59	47.75
TraesCS4D01G315100.1	Wheat	plasma membrane	48.76	47.73
Zm00001d007456_P005	Maize	cytosol	39.14	47.72
TraesCS1A01G004100.1	Wheat	cytosol	45.36	47.51
Zm00001d007457_P003	Maize	cytosol	50.68	47.36
TraesCS5A01G493600.1	Wheat	plasma membrane	49.32	47.34
TraesCS2B01G608500.1	Wheat	cytosol	44.34	47.29
TraesCS2D01G591300.1	Wheat	cytosol	39.14	46.82
HORVU2Hr1G040600.1	Barley	cytosol	45.48	46.53
Zm00001d036280_P002	Maize	cytosol	49.77	46.27
TraesCS7D01G538200.2	Wheat	cytosol	50.91	46.25
TraesCS2D01G590800.2	Wheat	extracellular	45.25	46.08
TraesCS1D01G005300.1	Wheat	cytosol	46.38	45.81
TraesCS2D01G590700.1	Wheat	cytosol	42.19	44.89
TraesCS2B01G608800.2	Wheat	cytosol	45.02	44.42
HORVU2Hr1G011300.1	Barley	cytosol, nucleus, plastid	46.38	44.23
TraesCS2B01G608000.1	Wheat	cytosol	44.34	43.36
OQU84067	Sorghum	cytosol	20.36	41.0
OQU84065	Sorghum	cytosol	32.01	39.64
EES09021	Sorghum	cytosol	31.9	38.84
KXG28969	Sorghum	endoplasmic reticulum, plasma membrane	39.03	38.33
KXG28972	Sorghum	cytosol	38.57	37.51
OQU88733	Sorghum	cytosol	12.1	37.28
OQU78620	Sorghum	cytosol	38.91	37.03
OQU83875	Sorghum	vacuole	35.52	36.73
OQU83886	Sorghum	cytosol	37.78	36.58
OQU83293	Sorghum	extracellular, plasma membrane	36.99	35.47
KXG24016	Sorghum	cytosol	38.01	35.33
OQU84063	Sorghum	cytosol	36.54	35.26
OQU84069	Sorghum	cytosol	36.88	35.21
OQU84059	Sorghum	cytosol	36.31	34.89
OQU84066	Sorghum	cytosol	36.2	34.56
EES09013	Sorghum	cytosol	35.86	34.42
KXG28412	Sorghum	cytosol	40.95	33.58
KXG34720	Sorghum	cytosol	22.06	33.56
OQU83095	Sorghum	cytosol	36.43	32.96
OQU84064	Sorghum	cytosol	27.38	32.53
EES08935	Sorghum	cytosol	35.75	32.02
KXG20043	Sorghum	cytosol	33.03	30.96
KXG21016	Sorghum	cytosol	31.11	30.9
EES10297	Sorghum	cytosol	33.82	30.45
OQU84068	Sorghum	golgi, plasma membrane, vacuole	23.64	30.2
KXG34721	Sorghum	cytosol, nucleus, peroxisome	18.44	28.3
KXG22895	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	35.18	26.81
EES19053	Sorghum	cytosol	34.73	22.41
OQU77456	Sorghum	cytosol	30.09	20.6

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A1Z5RJH6	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
EnsemblPlants:OQU83506	ProteinID:OQU83506	ProteinID:OQU83506.1	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364
PANTHER:PTHR43889	PANTHER:PTHR43889:SF34	InterPro:RX-like_CC	EnsemblPlantsGene:SORBI_3005G128000	SUPFAM:SSF52058	SUPFAM:SSF52540
UniParc:UPI000B8BA8B5	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:55592609..55596031

Molecular Weight (calculated)

100150.0 Da

IEP (calculated)

7.231

GRAVY (calculated)

-0.147

Length

884 amino acids

Sequence
(BLAST)

001: MDVVTGAVST LLPMMGDLLT QEYQLQASVR DDIAFLKAEL ESMEAALLRI SDSEAAPADR HRPPDAQDRL WAREVRELSG DVEDCVESFL RARPAQAVRR
101: AKIRRDMGAE VRDIKRRVVE VAERRVRYKV DGVPATAKPA GRGPPAADGG LRLSALYAAA TELVGTQERS RDLVRLLMAE CDGKSDRLLK KTVSVVGFGG
201: LGKTTLARIV YEELKGQFDC AAFVSVSYNP DMEKVFRDML CQLDKNRNTD IAMWGEAQLI EQLREFLRDK SYFIVIDDIW SCSVWNTVRH AFIQNQCGSR
301: IIMTTRILDV AKQANSIYEL RPLSPADSRK LFYQRIFGTQ DGGPPSHLAE VSENILKKCG GVPLAVITIA SLLATKRRKE NPDKYWYQVY QSMGSGLEST
401: DVKDMRRILS ISYYDLPPHL KTFLLYVTLY SEDYGIIIEE VIYKLIGEGI IQKQHGQTFY EAGEDCFEDL INRSIIQPMI LTMGTMYEPT RKIRRLFLQN
501: MKVEDVKKVV TMNLSRWRSL TVSSEAFTLL PTLSSFPIIR VLNLYGCTQV DNSHCKHICN LCHLRYLKLS LTSITEIPNE IGNLQLLQFL DLNMTNIKAL
601: PPTFVQLRKL EFLCVDNRTR LPECLGNLIS LQKLSPRITI SSPTMLCELS MLTELRRLML RFDDWDDESY EETFVQCLSN LVNLESLQIF DCHNGLGSNS
701: NIGMLLTTGP QQLRSMNIGP GTVRCVPRWL PSLFALSALD ITLLTLQEED LQVLGSIPSL RSLYIWVKEH RKDRCKRLAI GSDDCPFGCL TKIRIGPGAM
801: EVQFAAGAMR KLRTARLDLH VRHTLDQFGD FHCGLESLSS LERVIVHMNC YRAELEEVEA AEASIRKALD LNPNRPSFEL EKVV

Best Arabidopsis Sequence Match ( AT1G50180.1 )
(BLAST)

001: MAEAIVSVTV QKLGQLLLEE PLFLFGIGDQ VKQLQDELKR LNCFLKDADE KQHESERVRN WVAGIREASY DAEDILEAFF LKAESRKQKG MKRVLRRLAC
101: ILNEAVSLHS VGSEIREITS RLSKIAASML DFGIKESMGR EGLSLSDSLR EQRQSFPYVV EHNLVGLEQS LEKLVNDLVS GGEKLRVTSI CGMGGLGKTT
201: LAKQIFHHHK VRRHFDRFAW VYVSQDCRRR HVWQDIFLNL SYKDENQRIL SLRDEQLGEE LHRFLKRNKC LIVLDDIWGK DAWDCLKHVF PHETGSEIIL
301: TTRNKEVALY ADPRGVLHEP QLLTCEESWE LLEKISLSGR ENIEPMLVKK MEEIGKQIVV RCGGLPLAIT VLGGLLATKS TWNEWQRVCE NIKSYVSNGG
401: SSNGSKNMLV ADVLCLSYEY LPPHVKQCFL YFAHYPEDYE VHVGTLVSYC IAEGMVMPVK HTEAGTTVED VGQDYLEELV KRSMVMVGRR DIVTSEVMTC
501: RMHDLMREVC LQKAKQESFV QVIDSRDQDE AEAFISLSTN TSRRISVQLH GGAEEHHIKS LSQVSFRKMK LLRVLDLEGA QIEGGKLPDD VGDLIHLRNL
601: SVRLTNVKEL TSSIGNLKLM ITLDLFVKGQ LYIPNQLWDF PVGKCNPRDL LAMTSLRRLS INLSSQNTDF VVVSSLSKVL KRLRGLTINV PCEPMLPPVD
701: VTQLVSAFTN LCELELFLKL EKLPGEQSFS SDLGALRLWQ CGLVDDPFMV LEKLPNLKIL QLFEGSFVGS KLCCSKNLEN LEEWTVEDGA MMRLVTVELK
801: CCNKLKSVPE GTRFLKNLQE VEIGNRTKAF KDKLISGGED FYKVQHVPCV VFENCEL

Arabidopsis Description

Putative disease resistance protein At1g50180 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX38]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.