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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G488700.1 Wheat cytosol 24.83 44.47
TraesCS7D01G006300.1 Wheat cytosol 27.75 44.03
TraesCS4A01G488200.1 Wheat cytosol 34.94 43.13
TraesCS4A01G492100.1 Wheat cytosol 30.34 42.72
TraesCS7A01G005000.1 Wheat cytosol 13.6 42.16
TraesCS6B01G004600.1 Wheat cytosol 22.47 41.07
TraesCS4A01G488800.1 Wheat cytosol 34.04 39.0
TraesCS1B01G012500.1 Wheat cytosol 40.0 38.91
TraesCS7D01G429600.1 Wheat cytosol 33.93 38.13
TraesCS7B01G339100.1 Wheat cytosol 26.18 37.76
TraesCS2B01G084900.1 Wheat cytosol 15.17 37.29
TraesCS3A01G081800.1 Wheat cytosol 29.33 37.29
TraesCS7A01G006500.1 Wheat cytosol 37.98 37.02
OQU84065 Sorghum cytosol 29.66 36.97
HORVU7Hr1G000230.45 Barley cytosol 35.06 36.88
TraesCS7A01G008500.1 Wheat cytosol, vacuole 37.98 36.7
TraesCS6B01G004900.1 Wheat cytosol 13.37 36.62
EES09021 Sorghum cytosol 29.78 36.5
TraesCS4A01G490200.1 Wheat cytosol 26.4 36.32
TraesCS4A01G493500.2 Wheat cytosol 25.96 36.21
TraesCS7D01G006800.1 Wheat cytosol 26.97 36.09
OQU84067 Sorghum cytosol 17.75 35.99
TraesCS4A01G493900.1 Wheat cytosol, extracellular 36.63 35.78
TraesCS7A01G008400.1 Wheat cytosol, extracellular 9.89 35.77
TraesCS4A01G486500.2 Wheat cytosol, extracellular 37.42 35.77
TraesCS1D01G396500.1 Wheat cytosol 11.24 35.71
TraesCS3D01G082100.1 Wheat cytosol 36.85 35.57
TraesCS7D01G008200.1 Wheat cytosol 25.39 35.42
TraesCS7A01G005600.1 Wheat cytosol 34.61 35.4
TraesCS3B01G096900.1 Wheat cytosol 36.63 35.36
HORVU3Hr1G014640.2 Barley cytosol 23.15 35.33
HORVU7Hr1G100280.2 Barley cytosol 17.64 35.28
HORVU7Hr1G100300.4 Barley cytosol 33.6 35.22
HORVU3Hr1G014690.1 Barley cytosol 22.92 35.17
HORVU3Hr1G014650.1 Barley cytosol 22.92 35.17
OQU83095 Sorghum cytosol 38.54 35.11
TraesCS4A01G489800.1 Wheat cytosol 35.84 35.09
TraesCS4A01G474900.1 Wheat cytosol, endoplasmic reticulum 36.07 34.82
TraesCS6D01G005300.1 Wheat cytosol, extracellular, plastid 38.99 34.8
OQU84059 Sorghum cytosol 35.73 34.57
KXG28972 Sorghum cytosol 35.17 34.43
TraesCS7D01G429500.1 Wheat cytosol 29.89 34.19
OQU84063 Sorghum cytosol 34.94 33.95
TraesCS6B01G000100.1 Wheat cytosol 40.11 33.81
TraesCS6B01G000200.1 Wheat cytosol 11.57 33.66
TraesCS7A01G440200.2 Wheat cytosol 36.63 33.61
KXG28969 Sorghum endoplasmic reticulum, plasma membrane 33.82 33.44
TraesCS7B01G339200.1 Wheat cytosol 37.08 33.4
TraesCSU01G243100.1 Wheat cytosol 10.79 33.33
KXG24016 Sorghum cytosol 35.39 33.12
TraesCS2B01G084300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 35.84 32.95
OQU83875 Sorghum vacuole 31.57 32.87
OQU78620 Sorghum cytosol 34.16 32.72
OQU84064 Sorghum cytosol 27.3 32.66
EES09013 Sorghum cytosol 33.71 32.57
OQU88733 Sorghum cytosol 10.45 32.4
OQU83886 Sorghum cytosol 33.15 32.31
EES10297 Sorghum cytosol 35.51 32.18
OQU84069 Sorghum cytosol 33.37 32.07
HORVU7Hr1G100250.47 Barley cytosol 36.97 31.88
OQU84066 Sorghum cytosol 32.92 31.64
TraesCS7D01G005200.1 Wheat cytosol 11.57 31.5
KXG34720 Sorghum cytosol 20.45 31.33
OQU83506 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole 30.9 31.11
OQU83293 Sorghum extracellular, plasma membrane 32.13 31.02
OQU84068 Sorghum golgi, plasma membrane, vacuole 23.82 30.64
TraesCS7B01G496000.1 Wheat cytosol 9.78 30.53
EES08935 Sorghum cytosol 33.71 30.4
TraesCS2D01G069600.2 Wheat extracellular 36.52 29.79
TraesCS2A01G070700.2 Wheat extracellular 37.64 29.72
KXG20043 Sorghum cytosol 31.35 29.59
KXG28412 Sorghum cytosol 34.94 28.85
TraesCS2A01G070600.1 Wheat endoplasmic reticulum, extracellular 36.4 28.62
TraesCS2B01G085000.1 Wheat cytosol, endoplasmic reticulum, extracellular 36.18 28.37
KXG22895 Sorghum endoplasmic reticulum, plasma membrane, vacuole 35.62 27.33
KXG34721 Sorghum cytosol, nucleus, peroxisome 17.64 27.26
TraesCS4A01G487900.1 Wheat cytosol 13.6 26.71
EES19053 Sorghum cytosol 37.75 24.53
OQU77456 Sorghum cytosol 33.03 22.77
TraesCS7A01G440000.1 Wheat cytosol 36.63 17.78
Os08t0170800-01 Rice cytosol 8.31 15.74
Protein Annotations
Gene3D:3.40.50.300Gene3D:3.80.10.10MapMan:35.1UniProt:A0A1B6P5W0GO:GO:0000166GO:GO:0003674
GO:GO:0005488GO:GO:0043531InterPro:IPR032675EnsemblPlants:KXG21016ProteinID:KXG21016ProteinID:KXG21016.1
InterPro:LRR_dom_sfInterPro:NB-ARCInterPro:P-loop_NTPasePFAM:PF00931PRINTS:PR00364PANTHER:PTHR43889
PANTHER:PTHR43889:SF23InterPro:RX-like_CCEnsemblPlantsGene:SORBI_3009G004700SUPFAM:SSF52058SUPFAM:SSF52540UniParc:UPI00081ABDE6
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr9:+:394130..406437
Molecular Weight (calculated)
101399.0 Da
IEP (calculated)
7.243
GRAVY (calculated)
-0.163
Length
890 amino acids
Sequence
(BLAST)
001: MEGKGINRQS AVDLMAGAIG CLLPKLGEFL KQEHNLETSI KQDIESLDTQ LRTIMDTALP WVQQDDKHCA YQLRGLSYDI EDIMDNLLLL VGKASASKPI
101: TNQDSFKETL EDIKIQVKNL AASHAGNFVA TISTVDPCLD DMYYKGSRRL VGTHKLRDTL ISSMSSSSQR LKKISIWGAG GMGKTTLAKA VYENMKGDFH
201: CSTFVSIGRL PDMKKALRDI LIDIGKERYM VLNMTKLDKR QLIDELRHFL RNKRFLIVID DIWDMPSCEV IKCALVDSGC GSRIITTSCR IDVAETSGEV
301: FELMPLSIDD SKELFYATLF SSKSTITFDP LDEQFTEYIL HKCGGVPLAI ITIASLLARK PQDEWTRVYN SIGFGHEDYI AVENTRKIIQ CSYYDLPSHL
401: KTCILYLSIF PEYYVIEKDA LVWRWVAEGF VHEEQGKSLF KVGERYLYEL ISRSMIELVE NEGTNIRACR VHDMVLDLIR PVGKQEDFIT ILDGYDHDQR
501: QSYQSNARII AIQNRVLEKH DLMTRMHKPK VRSFNGYACR ISSMTLLRLG FQNLRVLSLE GCEITADGSD GLKNLAGLLH LRYLGLHGRN IWNLPMEIGD
601: LRYLQTLVLT DTYITALPHS VTLLRQLKCL WCFGLILELP EGMGNLTSLE ELRLGTLDSN SLNFAKELSK MKDLRVLSII NTDTFYGKWM ESLTESLSKL
701: QKMEELELFC DGPSSDKPCC SHVIAPGAFP KLQYLRTKTW LMFHPGAVPC LKSVELHIHV HALKDANFDF HDFSKLSYLR LLEKAHVQIN CWGGKMEDVE
801: EAEVALKQVL HSHPNRSTLI LERFGRCADN KEFKKISQKK IWVKDKYRKP CKVKCMGFLD LGYSDKLHHS RVGPEVITLE SLIIMTGFLQ
Best Arabidopsis Sequence Match ( AT1G50180.1 )
(BLAST)
001: MAEAIVSVTV QKLGQLLLEE PLFLFGIGDQ VKQLQDELKR LNCFLKDADE KQHESERVRN WVAGIREASY DAEDILEAFF LKAESRKQKG MKRVLRRLAC
101: ILNEAVSLHS VGSEIREITS RLSKIAASML DFGIKESMGR EGLSLSDSLR EQRQSFPYVV EHNLVGLEQS LEKLVNDLVS GGEKLRVTSI CGMGGLGKTT
201: LAKQIFHHHK VRRHFDRFAW VYVSQDCRRR HVWQDIFLNL SYKDENQRIL SLRDEQLGEE LHRFLKRNKC LIVLDDIWGK DAWDCLKHVF PHETGSEIIL
301: TTRNKEVALY ADPRGVLHEP QLLTCEESWE LLEKISLSGR ENIEPMLVKK MEEIGKQIVV RCGGLPLAIT VLGGLLATKS TWNEWQRVCE NIKSYVSNGG
401: SSNGSKNMLV ADVLCLSYEY LPPHVKQCFL YFAHYPEDYE VHVGTLVSYC IAEGMVMPVK HTEAGTTVED VGQDYLEELV KRSMVMVGRR DIVTSEVMTC
501: RMHDLMREVC LQKAKQESFV QVIDSRDQDE AEAFISLSTN TSRRISVQLH GGAEEHHIKS LSQVSFRKMK LLRVLDLEGA QIEGGKLPDD VGDLIHLRNL
601: SVRLTNVKEL TSSIGNLKLM ITLDLFVKGQ LYIPNQLWDF PVGKCNPRDL LAMTSLRRLS INLSSQNTDF VVVSSLSKVL KRLRGLTINV PCEPMLPPVD
701: VTQLVSAFTN LCELELFLKL EKLPGEQSFS SDLGALRLWQ CGLVDDPFMV LEKLPNLKIL QLFEGSFVGS KLCCSKNLEN LEEWTVEDGA MMRLVTVELK
801: CCNKLKSVPE GTRFLKNLQE VEIGNRTKAF KDKLISGGED FYKVQHVPCV VFENCEL
Arabidopsis Description
Putative disease resistance protein At1g50180 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX38]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.