Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU84067 | Sorghum | cytosol | 19.45 | 43.74 |
| Zm00001d007851_P002 | Maize | cytosol | 42.25 | 42.73 |
| OQU84065 | Sorghum | cytosol | 30.4 | 42.02 |
| OQU83095 | Sorghum | cytosol | 41.54 | 41.97 |
| Zm00001d024924_P001 | Maize | cytosol | 41.54 | 41.71 |
| EES09021 | Sorghum | cytosol | 30.5 | 41.46 |
| EES10297 | Sorghum | cytosol | 41.13 | 41.34 |
| Zm00001d004526_P001 | Maize | endoplasmic reticulum | 41.03 | 40.79 |
| OQU84059 | Sorghum | cytosol | 37.99 | 40.76 |
| OQU84063 | Sorghum | cytosol | 37.59 | 40.5 |
| OQU88733 | Sorghum | cytosol | 11.55 | 39.72 |
| KXG28972 | Sorghum | cytosol | 36.37 | 39.49 |
| OQU83886 | Sorghum | cytosol | 35.26 | 38.12 |
| OQU78620 | Sorghum | cytosol | 35.36 | 37.57 |
| EES09013 | Sorghum | cytosol | 34.85 | 37.35 |
| OQU84069 | Sorghum | cytosol | 34.85 | 37.15 |
| OQU84066 | Sorghum | cytosol | 34.65 | 36.93 |
| OQU83875 | Sorghum | vacuole | 31.71 | 36.61 |
| KXG28969 | Sorghum | endoplasmic reticulum, plasma membrane | 33.33 | 36.56 |
| KXG24016 | Sorghum | cytosol | 34.45 | 35.75 |
| OQU83506 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 32.02 | 35.75 |
| KXG34720 | Sorghum | cytosol | 20.77 | 35.28 |
| OQU84064 | Sorghum | cytosol | 26.04 | 34.54 |
| OQU83293 | Sorghum | extracellular, plasma membrane | 31.91 | 34.16 |
| KXG21016 | Sorghum | cytosol | 30.4 | 33.71 |
| HORVU3Hr1G099740.7 | Barley | cytosol | 36.98 | 33.09 |
| KXG34721 | Sorghum | cytosol, nucleus, peroxisome | 18.44 | 31.6 |
| OQU84068 | Sorghum | golgi, plasma membrane, vacuole | 21.99 | 31.36 |
| KXG20043 | Sorghum | cytosol | 29.79 | 31.18 |
| KXG28412 | Sorghum | cytosol | 33.43 | 30.61 |
| KXG22895 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 35.76 | 30.43 |
| EES19053 | Sorghum | cytosol | 38.8 | 27.96 |
| OQU77456 | Sorghum | cytosol | 33.13 | 25.33 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:C5Y7H3 | ncoils:Coil | EnsemblPlants:EES08935 |
| ProteinID:EES08935 | ProteinID:EES08935.2 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004185 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0043531 | GO:GO:0051603 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC |
| InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF33 | InterPro:RX-like_CC |
| EnsemblPlantsGene:SORBI_3005G208000 | SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI00081AB91D | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr5:-:69439654..69445574
Molecular Weight (calculated)
112616.0 Da
IEP (calculated)
6.699
GRAVY (calculated)
-0.219
Length
987 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVVTGALGS LAPKLLQLLG DEYKLQKGVK KQVQWVSIEL DNINAFFRKV SAVPWDRLDE LVKLWAREIR EASYDMEDVL DTFLVQLDGG APADPSRLKR
101: TLKKMGKVFS KAKARRSIAG AIEDIKKRLD DIAERRQRYK LDEKIAAAPT IIDPRLIATY KEVSQLIGVD KSRDDLISML NLLQPDDDAP DKKITKKVSI
201: VGVGGLGKTT VAKAVYENLK SQFDCAAFVS VGRDLDLVKV FKDILFDLDK EEYKDIHETK RGLEFLIREV REFLEKKRYF VVVDDVWEVE KWKKIKVAFI
301: ENNCGSRVIT TTRSVDVAKA SGEVYNLKPL SDDDSMNLFY TRIFGADRKF LGDQPDDISE KILKKCAGIP LAIITMGSLF AGKEKHQWPV LLDSIGFVHD
401: EDNNEVKDTM TILSFSYYDL PPELRTCLLY LSTYPEDYEI EKDPLIWKWI AEGFINPEKG KTLFELGEKY FNDLINRSLI QVVEAWDGRV SGCRIHDMVL
501: DMIRKLAFEE NFIALLSDNV EATNAASSVR RLVQQNRRAE HKNSEATVTE MTKVRSFSTF LCCINNRDQF LRFKILRVLD IVDCSFEEGC HLDHLGDLLH
601: LRYLGIQRCQ GRGYKIPKQI GNLKLLQTID VDTVLPESIF QVTKLVRLCA PPMDTVDGIG NLTSLEELII KRRPGGWDIP KRFIKELGRL RELRVLQFFP
701: TEKMGIQRDF VESLCNLKNI QHIGVNDGFC AYRPMWEAAG FVLPRSLCYL VLPVKFSKMP SCIDPSSLRF LFHLDLFVTT MDEQDLKLLA RLPALCFLML
801: RTESTVTASN INAGDGCFFQ KLRYFLTESI MVLFEQPNEK DGSVSFHMWN YSKQHAMPFV SRKSNDNNKS VVPRGVMPNL EILRFDISLK AIKDNNGDYG
901: SFGLEYLPSI RELSGPINCE GVSAKEVDAA LAALTNACKL HPNNPTFEMY TINDPVDLEI MNRLRQMTNR PNLPAKFVTE QFPDEDL
101: TLKKMGKVFS KAKARRSIAG AIEDIKKRLD DIAERRQRYK LDEKIAAAPT IIDPRLIATY KEVSQLIGVD KSRDDLISML NLLQPDDDAP DKKITKKVSI
201: VGVGGLGKTT VAKAVYENLK SQFDCAAFVS VGRDLDLVKV FKDILFDLDK EEYKDIHETK RGLEFLIREV REFLEKKRYF VVVDDVWEVE KWKKIKVAFI
301: ENNCGSRVIT TTRSVDVAKA SGEVYNLKPL SDDDSMNLFY TRIFGADRKF LGDQPDDISE KILKKCAGIP LAIITMGSLF AGKEKHQWPV LLDSIGFVHD
401: EDNNEVKDTM TILSFSYYDL PPELRTCLLY LSTYPEDYEI EKDPLIWKWI AEGFINPEKG KTLFELGEKY FNDLINRSLI QVVEAWDGRV SGCRIHDMVL
501: DMIRKLAFEE NFIALLSDNV EATNAASSVR RLVQQNRRAE HKNSEATVTE MTKVRSFSTF LCCINNRDQF LRFKILRVLD IVDCSFEEGC HLDHLGDLLH
601: LRYLGIQRCQ GRGYKIPKQI GNLKLLQTID VDTVLPESIF QVTKLVRLCA PPMDTVDGIG NLTSLEELII KRRPGGWDIP KRFIKELGRL RELRVLQFFP
701: TEKMGIQRDF VESLCNLKNI QHIGVNDGFC AYRPMWEAAG FVLPRSLCYL VLPVKFSKMP SCIDPSSLRF LFHLDLFVTT MDEQDLKLLA RLPALCFLML
801: RTESTVTASN INAGDGCFFQ KLRYFLTESI MVLFEQPNEK DGSVSFHMWN YSKQHAMPFV SRKSNDNNKS VVPRGVMPNL EILRFDISLK AIKDNNGDYG
901: SFGLEYLPSI RELSGPINCE GVSAKEVDAA LAALTNACKL HPNNPTFEMY TINDPVDLEI MNRLRQMTNR PNLPAKFVTE QFPDEDL
001: MELVSFGVEK LWDRLSQEYD QFKGVEDQVT ELKSNLNLLK SFLKDADAKK HISEMVRHCV EEIKDIVYDT EDIIETFILK EKVEMKRGIM KRIKRFASTI
101: MDRRELASDI GGISKRISKV IQDMQSFGVQ QIITDGSRSS HPLQERQREM RHTFSRDSEN DFVGMEANVK KLVGYLVEKD DYQIVSLTGM GGLGKTTLAR
201: QVFNHDVVKD RFDGFAWVSV SQEFTRISVW QTILQNLTSK ERKDEIQNMK EADLHDDLFR LLESSKTLIV LDDIWKEEDW DLIKPIFPPK KGWKVLLTSR
301: TESIAMRGDT TYISFKPKCL SIPDSWTLFQ SIAMPRKDTS EFKVDEEMEN MGKKMIKHCG GLSLAVKVLG GLLAAKYTLH DWKRLSENIG SHIVERTSGN
401: NSSIDHVLSV SFEELPNYLK HCFLYLAHFP EDHEIDVEKL HYYWAAEGIS ERRRYDGETI RDTGDSYIEE LVRRNMVISE RDVMTSRFET CRLHDMMREI
501: CLFKAKEENF LQIVSNHSPT SNPQTLGASR RFVLHNPTTL HVERYKNNPK LRSLVVVYDD IGNRRWMLSG SIFTRVKLLR VLDLVQAKFK GGKLPSDIGK
601: LIHLRYLSLK DAKVSHLPSS LRNLVLLIYL DIRTDFTDIF VPNVFMGMRE LRYLELPRFM HEKTKLELSN LEKLEALENF STKSSSLEDL RGMVRLRTLV
701: IILSEGTSLQ TLSASVCGLR HLENFKIMEN AGVNRMGEER MVLDFTYLKK LTLSIEMPRL PKIQHLPSHL TVLDLSYCCL EEDPMPILEK LLELKDLSLD
801: YLSFSGRKMV CSAGGFPQLR KLALDEQEEW EEWIVEEGSM SRLHTLSIWS STLKELPDGL RFIYSLKNLI MGKSWMERLS ERGEEFYKVQ NIPFIKFSS
101: MDRRELASDI GGISKRISKV IQDMQSFGVQ QIITDGSRSS HPLQERQREM RHTFSRDSEN DFVGMEANVK KLVGYLVEKD DYQIVSLTGM GGLGKTTLAR
201: QVFNHDVVKD RFDGFAWVSV SQEFTRISVW QTILQNLTSK ERKDEIQNMK EADLHDDLFR LLESSKTLIV LDDIWKEEDW DLIKPIFPPK KGWKVLLTSR
301: TESIAMRGDT TYISFKPKCL SIPDSWTLFQ SIAMPRKDTS EFKVDEEMEN MGKKMIKHCG GLSLAVKVLG GLLAAKYTLH DWKRLSENIG SHIVERTSGN
401: NSSIDHVLSV SFEELPNYLK HCFLYLAHFP EDHEIDVEKL HYYWAAEGIS ERRRYDGETI RDTGDSYIEE LVRRNMVISE RDVMTSRFET CRLHDMMREI
501: CLFKAKEENF LQIVSNHSPT SNPQTLGASR RFVLHNPTTL HVERYKNNPK LRSLVVVYDD IGNRRWMLSG SIFTRVKLLR VLDLVQAKFK GGKLPSDIGK
601: LIHLRYLSLK DAKVSHLPSS LRNLVLLIYL DIRTDFTDIF VPNVFMGMRE LRYLELPRFM HEKTKLELSN LEKLEALENF STKSSSLEDL RGMVRLRTLV
701: IILSEGTSLQ TLSASVCGLR HLENFKIMEN AGVNRMGEER MVLDFTYLKK LTLSIEMPRL PKIQHLPSHL TVLDLSYCCL EEDPMPILEK LLELKDLSLD
801: YLSFSGRKMV CSAGGFPQLR KLALDEQEEW EEWIVEEGSM SRLHTLSIWS STLKELPDGL RFIYSLKNLI MGKSWMERLS ERGEEFYKVQ NIPFIKFSS
Arabidopsis Description
RXW24LProbable disease resistance protein RXW24L [Source:UniProtKB/Swiss-Prot;Acc:Q9C646]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.