Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 7
- golgi 5
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG28972 | Sorghum | cytosol | 54.56 | 54.02 |
| OQU78620 | Sorghum | cytosol | 55.67 | 53.93 |
| OQU83875 | Sorghum | vacuole | 50.89 | 53.57 |
| OQU83886 | Sorghum | cytosol | 52.11 | 51.37 |
| OQU84067 | Sorghum | cytosol | 21.89 | 44.87 |
| OQU84065 | Sorghum | cytosol | 35.33 | 44.54 |
| EES09021 | Sorghum | cytosol | 35.0 | 43.39 |
| OQU88733 | Sorghum | cytosol | 13.11 | 41.12 |
| OQU84059 | Sorghum | cytosol | 41.67 | 40.76 |
| OQU84069 | Sorghum | cytosol | 41.33 | 40.17 |
| KXG24016 | Sorghum | cytosol | 42.22 | 39.96 |
| OQU84066 | Sorghum | cytosol | 41.0 | 39.85 |
| OQU84063 | Sorghum | cytosol | 40.22 | 39.52 |
| EES09013 | Sorghum | cytosol | 40.0 | 39.09 |
| OQU83506 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 38.33 | 39.03 |
| OQU84064 | Sorghum | cytosol | 31.44 | 38.04 |
| OQU83293 | Sorghum | extracellular, plasma membrane | 38.89 | 37.96 |
| KXG34720 | Sorghum | cytosol | 23.78 | 36.83 |
| OQU84068 | Sorghum | golgi, plasma membrane, vacuole | 28.11 | 36.56 |
| KXG20043 | Sorghum | cytosol | 38.11 | 36.37 |
| OQU83095 | Sorghum | cytosol | 39.22 | 36.13 |
| EES10297 | Sorghum | cytosol | 39.22 | 35.95 |
| KXG28412 | Sorghum | cytosol | 42.44 | 35.44 |
| KXG21016 | Sorghum | cytosol | 33.44 | 33.82 |
| EES08935 | Sorghum | cytosol | 36.56 | 33.33 |
| KXG34721 | Sorghum | cytosol, nucleus, peroxisome | 19.0 | 29.69 |
| KXG22895 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 37.67 | 29.22 |
| EES19053 | Sorghum | cytosol | 38.67 | 25.4 |
| OQU77456 | Sorghum | cytosol | 34.22 | 23.86 |
Protein Annotations
| Gene3D:1.10.8.430 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:C5Y6I7 | ncoils:Coil |
| ProteinID:EES08872.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0043531 | InterPro:IPR032675 | EnsemblPlants:KXG28969 | ProteinID:KXG28969 |
| ProteinID:KXG28969.1 | InterPro:LRR_dom_sf | InterPro:NB-ARC | ProteinID:OQU83869.1 | ProteinID:OQU83870.1 | ProteinID:OQU83871.1 |
| ProteinID:OQU83872.1 | ProteinID:OQU83874.1 | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43889 |
| PANTHER:PTHR43889:SF26 | InterPro:RX-like_CC | EnsemblPlantsGene:SORBI_3005G192100 | SUPFAM:SSF52047 | SUPFAM:SSF52540 | UniParc:UPI0001A86567 |
| RefSeq:XP_002449884.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:67564162..67568602
Molecular Weight (calculated)
102954.0 Da
IEP (calculated)
6.801
GRAVY (calculated)
-0.104
Length
900 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVVTGVLTG LVFKLGKLLV GEYNLQKGVK GEIMFLQPEL QSMQGALKEI SKAPSDELDH QDRIWASEVR ELSYDIEDSI DMFVVRCEGG QQLLAAPDGM
101: RGFIDRSLDL LTRFRVRRQV AMDIRDIKRR VIEARERREA YKIDGVGGAR PDVVDPRLLA HYTAVTELVG IDDARDELIK VLTDDGSQEA SKQHGRVVSI
201: VGCGGLGKTT LANVVYQKIR TQFDCWAFVS VSQTPDMRRL FEGILSELGK DINEETRDVR HFIDAIGKFL QTKRYCIVID DIWDISVWKM IRCALPDNMG
301: GYVIITTTRN FKVAEEIGGA YSMKALCHES SRKLFYTRIF GNEEKYKCPD EHLTEVSHRI LNKCAGVPLA IITIASLLAN KARDKMEWLE VYNSIGTGLE
401: DSTDVENMRK ILAYSYYDLK YHLRVCLLYL SMFPEDYPIT KNHLIWMWIA EGFVQCEQGK SLFELGECYF NELINTSMIQ PVYDRHEAMI EHCRVHDMVL
501: EVIRSLSNED NFVTILNNEH STSSQSKMFR RLSLQNSVVH LASPFPSTSM LQVRSVITFS SALDQMPALA SFRVLRVLNL KGSYLPQGCD LKHLGNLFHL
601: RYLGLGRTYT NELPEEIGNL RYLQTLDVVG SYIGSLPSTV VQLRHLMCLC VDQNTRVPNG IGRLTALEEL STLYTCDEST DIPEELCHLT ELRVLELFFW
701: NNTLEKSLVA CLCKLRKIQS LVIWASGGEY NFDAWVAPRH VQRLQLQSCW FSRLPDWMNP SPLGLSFLWI NVRELRQEDL ETLGRLPALR HLYLKLDHEK
801: LKIPRRFIVG ACSFPCLVEC RLLGFMGAVF FHQGAMIKLR NLSLTLYARD VREIMASSDG SCCFDLGLGN LLSLQEFRVS LFTSDLEAPT RWKWRRPRLQ
101: RGFIDRSLDL LTRFRVRRQV AMDIRDIKRR VIEARERREA YKIDGVGGAR PDVVDPRLLA HYTAVTELVG IDDARDELIK VLTDDGSQEA SKQHGRVVSI
201: VGCGGLGKTT LANVVYQKIR TQFDCWAFVS VSQTPDMRRL FEGILSELGK DINEETRDVR HFIDAIGKFL QTKRYCIVID DIWDISVWKM IRCALPDNMG
301: GYVIITTTRN FKVAEEIGGA YSMKALCHES SRKLFYTRIF GNEEKYKCPD EHLTEVSHRI LNKCAGVPLA IITIASLLAN KARDKMEWLE VYNSIGTGLE
401: DSTDVENMRK ILAYSYYDLK YHLRVCLLYL SMFPEDYPIT KNHLIWMWIA EGFVQCEQGK SLFELGECYF NELINTSMIQ PVYDRHEAMI EHCRVHDMVL
501: EVIRSLSNED NFVTILNNEH STSSQSKMFR RLSLQNSVVH LASPFPSTSM LQVRSVITFS SALDQMPALA SFRVLRVLNL KGSYLPQGCD LKHLGNLFHL
601: RYLGLGRTYT NELPEEIGNL RYLQTLDVVG SYIGSLPSTV VQLRHLMCLC VDQNTRVPNG IGRLTALEEL STLYTCDEST DIPEELCHLT ELRVLELFFW
701: NNTLEKSLVA CLCKLRKIQS LVIWASGGEY NFDAWVAPRH VQRLQLQSCW FSRLPDWMNP SPLGLSFLWI NVRELRQEDL ETLGRLPALR HLYLKLDHEK
801: LKIPRRFIVG ACSFPCLVEC RLLGFMGAVF FHQGAMIKLR NLSLTLYARD VREIMASSDG SCCFDLGLGN LLSLQEFRVS LFTSDLEAPT RWKWRRPRLQ
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.